Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AL442644.1-201ENST00000454390 3105 ntBASIC1.23□□□□□ -2.21
CDK7P50613 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CDK7P50613 RNA5SP325-201ENST00000363756 130 ntBASIC1.22□□□□□ -2.21
CDK7P50613 RNU4-84P-201ENST00000364200 139 ntBASIC1.22□□□□□ -2.21
CDK7P50613 RNU6-597P-201ENST00000365620 102 ntBASIC1.22□□□□□ -2.21
CDK7P50613 SNORA2B-201ENST00000384583 137 ntBASIC1.22□□□□□ -2.21
CDK7P50613 MIR548I3-201ENST00000408378 149 ntBASIC1.22□□□□□ -2.21
CDK7P50613 RNU6-588P-201ENST00000410281 105 ntBASIC1.22□□□□□ -2.21
CDK7P50613 RNU6-1149P-201ENST00000516810 97 ntBASIC1.22□□□□□ -2.21
CDK7P50613 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.22□□□□□ -2.21
CDK7P50613 AP000753.3-201ENST00000604083 169 ntBASIC1.22□□□□□ -2.21
CDK7P50613 MIR376A2-201ENST00000636782 80 ntBASIC1.22□□□□□ -2.21
CDK7P50613 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
CDK7P50613 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CDK7P50613 SNORD38B-201ENST00000384690 67 ntBASIC1.21□□□□□ -2.22
CDK7P50613 MIR624-201ENST00000385217 97 ntBASIC1.21□□□□□ -2.22
CDK7P50613 RNU6-913P-201ENST00000390913 95 ntBASIC1.21□□□□□ -2.22
CDK7P50613 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
CDK7P50613 RNA5SP95-201ENST00000410319 137 ntBASIC1.21□□□□□ -2.22
CDK7P50613 RNU5E-9P-201ENST00000411164 104 ntBASIC1.21□□□□□ -2.22
CDK7P50613 HMGN1P33-201ENST00000432945 451 ntBASIC1.21□□□□□ -2.22
CDK7P50613 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.21□□□□□ -2.22
CDK7P50613 RNU7-73P-201ENST00000458743 63 ntBASIC1.21□□□□□ -2.22
CDK7P50613 RNU7-21P-201ENST00000459430 62 ntBASIC1.21□□□□□ -2.22
CDK7P50613 RNU11-2P-201ENST00000516898 142 ntBASIC1.21□□□□□ -2.22
CDK7P50613 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.21□□□□□ -2.22
CDK7P50613 SNORD38B-202ENST00000625943 69 ntBASIC1.21□□□□□ -2.22
CDK7P50613 MIR6516-201ENST00000630554 81 ntBASIC1.21□□□□□ -2.22
CDK7P50613 MTND5P32-201ENST00000560711 1802 ntBASIC1.2□□□□□ -2.22
CDK7P50613 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CDK7P50613 Y_RNA.36-201ENST00000362602 112 ntBASIC1.2□□□□□ -2.22
CDK7P50613 RNU6-654P-201ENST00000364373 107 ntBASIC1.2□□□□□ -2.22
CDK7P50613 RNU6-1082P-201ENST00000364574 107 ntBASIC1.2□□□□□ -2.22
CDK7P50613 Y_RNA.272-201ENST00000364696 102 ntBASIC1.2□□□□□ -2.22
CDK7P50613 SNORD18B-201ENST00000365659 72 ntBASIC1.2□□□□□ -2.22
CDK7P50613 SNORA24-201ENST00000384096 131 ntBASIC1.2□□□□□ -2.22
CDK7P50613 SNORA20-201ENST00000384662 132 ntBASIC1.2□□□□□ -2.22
CDK7P50613 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
CDK7P50613 RNU6-205P-201ENST00000390858 107 ntBASIC1.2□□□□□ -2.22
CDK7P50613 SNORA75.5-201ENST00000391291 81 ntBASIC1.2□□□□□ -2.22
CDK7P50613 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.2□□□□□ -2.22
CDK7P50613 RNU6-994P-201ENST00000410507 111 ntBASIC1.2□□□□□ -2.22
CDK7P50613 AC002429.1-201ENST00000437672 148 ntBASIC1.2□□□□□ -2.22
CDK7P50613 RNU7-45P-201ENST00000459460 63 ntBASIC1.2□□□□□ -2.22
CDK7P50613 DNAJC19P2-201ENST00000593340 302 ntBASIC1.2□□□□□ -2.22
CDK7P50613 AC091932.4-201ENST00000623386 200 ntBASIC1.2□□□□□ -2.22
CDK7P50613 MIR3658-201ENST00000636291 56 ntBASIC1.2□□□□□ -2.22
CDK7P50613 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.19□□□□□ -2.22
CDK7P50613 SNORD12-201ENST00000391002 90 ntBASIC1.19□□□□□ -2.22
CDK7P50613 RNA5SP261-201ENST00000410536 106 ntBASIC1.19□□□□□ -2.22
CDK7P50613 MIR5000-201ENST00000577717 103 ntBASIC1.19□□□□□ -2.22
CDK7P50613 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.19□□□□□ -2.22
CDK7P50613 RNU6-151P-201ENST00000364158 107 ntBASIC1.18□□□□□ -2.22
CDK7P50613 AP003716.2-201ENST00000528260 108 ntBASIC1.18□□□□□ -2.22
CDK7P50613 MIR3152-201ENST00000579801 74 ntBASIC1.18□□□□□ -2.22
CDK7P50613 AC027335.2-201ENST00000624030 375 ntBASIC1.18□□□□□ -2.22
CDK7P50613 RNU6-449P-201ENST00000383914 107 ntBASIC1.17□□□□□ -2.22
CDK7P50613 SNORD116-18-201ENST00000383961 92 ntBASIC1.17□□□□□ -2.22
CDK7P50613 MIR1302-7-201ENST00000408841 72 ntBASIC1.17□□□□□ -2.22
CDK7P50613 RNU6-1190P-201ENST00000410811 104 ntBASIC1.17□□□□□ -2.22
CDK7P50613 AC090844.1-201ENST00000422019 156 ntBASIC1.17□□□□□ -2.22
CDK7P50613 RPS29P28-201ENST00000446439 141 ntBASIC1.17□□□□□ -2.22
CDK7P50613 RNU5E-3P-201ENST00000515913 68 ntBASIC1.17□□□□□ -2.22
CDK7P50613 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
CDK7P50613 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.17□□□□□ -2.22
CDK7P50613 MIR3646-201ENST00000578301 84 ntBASIC1.17□□□□□ -2.22
CDK7P50613 AC131055.1-201ENST00000584626 316 ntBASIC1.17□□□□□ -2.22
CDK7P50613 Y_RNA.52-201ENST00000362760 96 ntBASIC1.16□□□□□ -2.22
CDK7P50613 RNU4-16P-201ENST00000364737 141 ntBASIC1.16□□□□□ -2.22
CDK7P50613 RNU4-11P-201ENST00000365287 132 ntBASIC1.16□□□□□ -2.22
CDK7P50613 Y_RNA.441-201ENST00000384123 112 ntBASIC1.16□□□□□ -2.22
CDK7P50613 RNU6-125P-201ENST00000384505 107 ntBASIC1.16□□□□□ -2.22
CDK7P50613 MIR942-201ENST00000401111 86 ntBASIC1.16□□□□□ -2.22
CDK7P50613 AL392103.1-201ENST00000447000 198 ntBASIC1.16□□□□□ -2.22
CDK7P50613 AC067940.1-201ENST00000458411 300 ntBASIC1.16□□□□□ -2.22
CDK7P50613 AC211469.2-201ENST00000605461 205 ntBASIC1.16□□□□□ -2.22
CDK7P50613 SNORD114-21-201ENST00000606412 72 ntBASIC1.16□□□□□ -2.22
CDK7P50613 AL020996.3-201ENST00000606617 222 ntBASIC1.16□□□□□ -2.22
CDK7P50613 AC098479.1-201ENST00000609225 154 ntBASIC1.16□□□□□ -2.22
CDK7P50613 FTX_2.1-201ENST00000618816 94 ntBASIC1.16□□□□□ -2.22
CDK7P50613 SNORD113.3-201ENST00000364630 78 ntBASIC1.15□□□□□ -2.23
CDK7P50613 Y_RNA.584-201ENST00000391090 114 ntBASIC1.15□□□□□ -2.23
CDK7P50613 RNU6-1135P-201ENST00000411083 103 ntBASIC1.15□□□□□ -2.23
CDK7P50613 RPS3AP1-201ENST00000413190 320 ntBASIC1.15□□□□□ -2.23
CDK7P50613 RNU6-804P-201ENST00000384286 107 ntBASIC1.14□□□□□ -2.23
CDK7P50613 RNU6-886P-201ENST00000384319 105 ntBASIC1.14□□□□□ -2.23
CDK7P50613 MTATP6P21-201ENST00000440681 189 ntBASIC1.14□□□□□ -2.23
CDK7P50613 SNORD124-201ENST00000459577 104 ntBASIC1.14□□□□□ -2.23
CDK7P50613 RNU7-121P-201ENST00000516604 62 ntBASIC1.14□□□□□ -2.23
CDK7P50613 AC112693.2-201ENST00000556538 232 ntBASIC1.14□□□□□ -2.23
CDK7P50613 MIR3973-201ENST00000579824 107 ntBASIC1.14□□□□□ -2.23
CDK7P50613 RNU6-94P-201ENST00000607728 107 ntBASIC1.14□□□□□ -2.23
CDK7P50613 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.14□□□□□ -2.23
CDK7P50613 MIR6717-201ENST00000622747 73 ntBASIC1.14□□□□□ -2.23
CDK7P50613 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CDK7P50613 Y_RNA.205-201ENST00000364128 113 ntBASIC1.13□□□□□ -2.23
CDK7P50613 RNU6-1130P-201ENST00000365434 107 ntBASIC1.13□□□□□ -2.23
CDK7P50613 MIR513C-201ENST00000401352 84 ntBASIC1.13□□□□□ -2.23
CDK7P50613 SNORD111-201ENST00000408139 94 ntBASIC1.13□□□□□ -2.23
CDK7P50613 CYP3A137P-201ENST00000562436 69 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms