Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RNU2-11P-201ENST00000459191 187 ntBASIC1.24□□□□□ -2.21
TM4SF4P48230 Y_RNA.700-201ENST00000516806 100 ntBASIC1.24□□□□□ -2.21
TM4SF4P48230 MIR6857-201ENST00000613267 93 ntBASIC1.24□□□□□ -2.21
TM4SF4P48230 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TM4SF4P48230 SNORA1.1-201ENST00000364671 133 ntBASIC1.23□□□□□ -2.21
TM4SF4P48230 Y_RNA.494-201ENST00000384432 111 ntBASIC1.23□□□□□ -2.21
TM4SF4P48230 SNORD111-201ENST00000408139 94 ntBASIC1.23□□□□□ -2.21
TM4SF4P48230 RNU6-613P-201ENST00000410412 108 ntBASIC1.23□□□□□ -2.21
TM4SF4P48230 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.23□□□□□ -2.21
TM4SF4P48230 Y_RNA.29-201ENST00000362570 113 ntBASIC1.22□□□□□ -2.21
TM4SF4P48230 RNU6-978P-201ENST00000364371 103 ntBASIC1.22□□□□□ -2.21
TM4SF4P48230 SNORD113.3-201ENST00000364630 78 ntBASIC1.22□□□□□ -2.21
TM4SF4P48230 Y_RNA.337-201ENST00000365312 102 ntBASIC1.22□□□□□ -2.21
TM4SF4P48230 SNORD38B-201ENST00000384690 67 ntBASIC1.22□□□□□ -2.21
TM4SF4P48230 MT-TN-201ENST00000387400 73 ntBASIC1.22□□□□□ -2.21
TM4SF4P48230 MIR3973-201ENST00000579824 107 ntBASIC1.22□□□□□ -2.21
TM4SF4P48230 MIR4264-201ENST00000583520 66 ntBASIC1.22□□□□□ -2.21
TM4SF4P48230 MIR7974-201ENST00000615835 79 ntBASIC1.22□□□□□ -2.21
TM4SF4P48230 AC012676.2-201ENST00000619258 186 ntBASIC1.22□□□□□ -2.21
TM4SF4P48230 SNORD38B-202ENST00000625943 69 ntBASIC1.22□□□□□ -2.21
TM4SF4P48230 MIR6516-201ENST00000630554 81 ntBASIC1.22□□□□□ -2.21
TM4SF4P48230 RNU6-138P-201ENST00000515952 107 ntBASIC1.21□□□□□ -2.22
TM4SF4P48230 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.21□□□□□ -2.22
TM4SF4P48230 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.21□□□□□ -2.22
TM4SF4P48230 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
TM4SF4P48230 MIR377-201ENST00000362145 69 ntBASIC1.2□□□□□ -2.22
TM4SF4P48230 RNA5SP457-201ENST00000363657 124 ntBASIC1.2□□□□□ -2.22
TM4SF4P48230 SNORA20-201ENST00000384662 132 ntBASIC1.2□□□□□ -2.22
TM4SF4P48230 MIR532-201ENST00000385025 91 ntBASIC1.2□□□□□ -2.22
TM4SF4P48230 MIR624-201ENST00000385217 97 ntBASIC1.2□□□□□ -2.22
TM4SF4P48230 MIR4661-201ENST00000582720 75 ntBASIC1.2□□□□□ -2.22
TM4SF4P48230 AC131055.1-201ENST00000584626 316 ntBASIC1.2□□□□□ -2.22
TM4SF4P48230 SNORD114-21-201ENST00000606412 72 ntBASIC1.2□□□□□ -2.22
TM4SF4P48230 AL020996.3-201ENST00000606617 222 ntBASIC1.2□□□□□ -2.22
TM4SF4P48230 AC106800.4-201ENST00000614905 153 ntBASIC1.2□□□□□ -2.22
TM4SF4P48230 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TM4SF4P48230 Y_RNA.178-201ENST00000363832 102 ntBASIC1.19□□□□□ -2.22
TM4SF4P48230 RNU6-654P-201ENST00000364373 107 ntBASIC1.19□□□□□ -2.22
TM4SF4P48230 MIR1302-7-201ENST00000408841 72 ntBASIC1.19□□□□□ -2.22
TM4SF4P48230 RNU6-1219P-201ENST00000516143 112 ntBASIC1.19□□□□□ -2.22
TM4SF4P48230 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.19□□□□□ -2.22
TM4SF4P48230 AL136317.1-201ENST00000612653 226 ntBASIC1.19□□□□□ -2.22
TM4SF4P48230 AL596211.1-201ENST00000569873 2277 ntBASIC1.19□□□□□ -2.22
TM4SF4P48230 Y_RNA.168-201ENST00000363740 102 ntBASIC1.18□□□□□ -2.22
TM4SF4P48230 RNU6-597P-201ENST00000365620 102 ntBASIC1.18□□□□□ -2.22
TM4SF4P48230 SNORD124-201ENST00000459577 104 ntBASIC1.18□□□□□ -2.22
TM4SF4P48230 Y_RNA.662-201ENST00000516028 97 ntBASIC1.18□□□□□ -2.22
TM4SF4P48230 SNORA81.3-201ENST00000517283 198 ntBASIC1.18□□□□□ -2.22
TM4SF4P48230 AC022559.1-201ENST00000520905 205 ntBASIC1.18□□□□□ -2.22
TM4SF4P48230 MIR3152-201ENST00000579801 74 ntBASIC1.18□□□□□ -2.22
TM4SF4P48230 RNU6-913P-201ENST00000390913 95 ntBASIC1.17□□□□□ -2.22
TM4SF4P48230 MTND5P15-201ENST00000434246 349 ntBASIC1.17□□□□□ -2.22
TM4SF4P48230 PDCD5P2-201ENST00000507570 312 ntBASIC1.17□□□□□ -2.22
TM4SF4P48230 UBL5P1-201ENST00000507979 193 ntBASIC1.17□□□□□ -2.22
TM4SF4P48230 MIR1273G-201ENST00000577677 100 ntBASIC1.17□□□□□ -2.22
TM4SF4P48230 RNU4-38P-201ENST00000364472 129 ntBASIC1.16□□□□□ -2.22
TM4SF4P48230 MIR193B-201ENST00000384907 83 ntBASIC1.16□□□□□ -2.22
TM4SF4P48230 RNU6-205P-201ENST00000390858 107 ntBASIC1.16□□□□□ -2.22
TM4SF4P48230 RNA5SP95-201ENST00000410319 137 ntBASIC1.16□□□□□ -2.22
TM4SF4P48230 RPS3AP1-201ENST00000413190 320 ntBASIC1.16□□□□□ -2.22
TM4SF4P48230 RPS29P28-201ENST00000446439 141 ntBASIC1.16□□□□□ -2.22
TM4SF4P48230 RNU7-120P-201ENST00000459334 63 ntBASIC1.16□□□□□ -2.22
TM4SF4P48230 AC036111.3-201ENST00000526389 112 ntBASIC1.16□□□□□ -2.22
TM4SF4P48230 AC091932.4-201ENST00000623386 200 ntBASIC1.16□□□□□ -2.22
TM4SF4P48230 Z97988.1-201ENST00000637697 135 ntBASIC1.16□□□□□ -2.22
TM4SF4P48230 AL391516.1-201ENST00000554380 2449 ntBASIC1.15□□□□□ -2.23
TM4SF4P48230 SNORD37.2-201ENST00000391075 66 ntBASIC1.15□□□□□ -2.23
TM4SF4P48230 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.15□□□□□ -2.23
TM4SF4P48230 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.15□□□□□ -2.23
TM4SF4P48230 RNU7-62P-201ENST00000458856 62 ntBASIC1.15□□□□□ -2.23
TM4SF4P48230 RNU6-182P-201ENST00000516970 105 ntBASIC1.15□□□□□ -2.23
TM4SF4P48230 RNU6-94P-201ENST00000607728 107 ntBASIC1.15□□□□□ -2.23
TM4SF4P48230 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.15□□□□□ -2.23
TM4SF4P48230 RNU6-818P-201ENST00000364837 108 ntBASIC1.14□□□□□ -2.23
TM4SF4P48230 RNU6-125P-201ENST00000384505 107 ntBASIC1.14□□□□□ -2.23
TM4SF4P48230 RNU6-239P-201ENST00000390990 99 ntBASIC1.14□□□□□ -2.23
TM4SF4P48230 SNORA75.5-201ENST00000391291 81 ntBASIC1.14□□□□□ -2.23
TM4SF4P48230 HMGN1P33-201ENST00000432945 451 ntBASIC1.14□□□□□ -2.23
TM4SF4P48230 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
TM4SF4P48230 MIR6844-201ENST00000637122 62 ntBASIC1.14□□□□□ -2.23
TM4SF4P48230 Y_RNA.785-201ENST00000384290 109 ntBASIC1.13□□□□□ -2.23
TM4SF4P48230 RNU6-1149P-201ENST00000516810 97 ntBASIC1.13□□□□□ -2.23
TM4SF4P48230 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.13□□□□□ -2.23
TM4SF4P48230 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.13□□□□□ -2.23
TM4SF4P48230 HSPE1P19-201ENST00000603327 295 ntBASIC1.13□□□□□ -2.23
TM4SF4P48230 AL590095.2-201ENST00000604136 117 ntBASIC1.13□□□□□ -2.23
TM4SF4P48230 MIR8055-201ENST00000610739 97 ntBASIC1.13□□□□□ -2.23
TM4SF4P48230 MIR1-1-201ENST00000362147 71 ntBASIC1.12□□□□□ -2.23
TM4SF4P48230 Y_RNA.240-201ENST00000364469 95 ntBASIC1.12□□□□□ -2.23
TM4SF4P48230 RNU6-768P-201ENST00000384683 107 ntBASIC1.12□□□□□ -2.23
TM4SF4P48230 RNU6-893P-201ENST00000458841 100 ntBASIC1.12□□□□□ -2.23
TM4SF4P48230 Y_RNA.681-201ENST00000516445 113 ntBASIC1.12□□□□□ -2.23
TM4SF4P48230 RNU6-861P-201ENST00000516745 106 ntBASIC1.12□□□□□ -2.23
TM4SF4P48230 MIR3646-201ENST00000578301 84 ntBASIC1.12□□□□□ -2.23
TM4SF4P48230 MIR376A2-201ENST00000636782 80 ntBASIC1.12□□□□□ -2.23
TM4SF4P48230 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TM4SF4P48230 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
TM4SF4P48230 MIR100-201ENST00000385259 80 ntBASIC1.11□□□□□ -2.23
TM4SF4P48230 MTATP6P21-201ENST00000440681 189 ntBASIC1.11□□□□□ -2.23
TM4SF4P48230 AC025627.3-201ENST00000582078 182 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms