Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SNORD38B-201ENST00000384690 67 ntBASIC0.78□□□□□ -2.28
NEDD4P46934 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.78□□□□□ -2.28
NEDD4P46934 RNA5SP255-201ENST00000516370 107 ntBASIC0.78□□□□□ -2.28
NEDD4P46934 RNU6-1110P-201ENST00000516462 101 ntBASIC0.78□□□□□ -2.28
NEDD4P46934 MIR4308-201ENST00000580634 81 ntBASIC0.78□□□□□ -2.28
NEDD4P46934 AC025627.3-201ENST00000582078 182 ntBASIC0.78□□□□□ -2.28
NEDD4P46934 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.78□□□□□ -2.28
NEDD4P46934 AL020996.3-201ENST00000606617 222 ntBASIC0.78□□□□□ -2.28
NEDD4P46934 SNORD38B-202ENST00000625943 69 ntBASIC0.78□□□□□ -2.28
NEDD4P46934 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
NEDD4P46934 Y_RNA.83-201ENST00000363005 113 ntBASIC0.77□□□□□ -2.29
NEDD4P46934 Y_RNA.182-201ENST00000363880 111 ntBASIC0.77□□□□□ -2.29
NEDD4P46934 RNU6-275P-201ENST00000364910 107 ntBASIC0.77□□□□□ -2.29
NEDD4P46934 Y_RNA.351-201ENST00000365436 96 ntBASIC0.77□□□□□ -2.29
NEDD4P46934 Y_RNA.454-201ENST00000384224 113 ntBASIC0.77□□□□□ -2.29
NEDD4P46934 RNU6-994P-201ENST00000410507 111 ntBASIC0.77□□□□□ -2.29
NEDD4P46934 RNA5SP261-201ENST00000410536 106 ntBASIC0.77□□□□□ -2.29
NEDD4P46934 MTND5P15-201ENST00000434246 349 ntBASIC0.77□□□□□ -2.29
NEDD4P46934 AC133485.1-201ENST00000567176 124 ntBASIC0.77□□□□□ -2.29
NEDD4P46934 AC138907.6-201ENST00000568401 126 ntBASIC0.77□□□□□ -2.29
NEDD4P46934 MIR3129-201ENST00000581095 76 ntBASIC0.77□□□□□ -2.29
NEDD4P46934 MIR5197-201ENST00000583721 112 ntBASIC0.77□□□□□ -2.29
NEDD4P46934 Z83818.1-201ENST00000603584 150 ntBASIC0.77□□□□□ -2.29
NEDD4P46934 MIR302B-201ENST00000362188 73 ntBASIC0.76□□□□□ -2.29
NEDD4P46934 Y_RNA.75-201ENST00000362927 97 ntBASIC0.76□□□□□ -2.29
NEDD4P46934 RNU6-125P-201ENST00000384505 107 ntBASIC0.76□□□□□ -2.29
NEDD4P46934 RNU6-913P-201ENST00000390913 95 ntBASIC0.76□□□□□ -2.29
NEDD4P46934 AC009779.6-201ENST00000603972 165 ntBASIC0.76□□□□□ -2.29
NEDD4P46934 RNU6-978P-201ENST00000364371 103 ntBASIC0.75□□□□□ -2.29
NEDD4P46934 SNORA1.1-201ENST00000364671 133 ntBASIC0.75□□□□□ -2.29
NEDD4P46934 RNU6-643P-201ENST00000384018 107 ntBASIC0.75□□□□□ -2.29
NEDD4P46934 MT-TG-201ENST00000387429 68 ntBASIC0.75□□□□□ -2.29
NEDD4P46934 RNU6-918P-201ENST00000391219 106 ntBASIC0.75□□□□□ -2.29
NEDD4P46934 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.75□□□□□ -2.29
NEDD4P46934 RPS3AP1-201ENST00000413190 320 ntBASIC0.75□□□□□ -2.29
NEDD4P46934 AC244023.1-201ENST00000426884 112 ntBASIC0.75□□□□□ -2.29
NEDD4P46934 RNU2-11P-201ENST00000459191 187 ntBASIC0.75□□□□□ -2.29
NEDD4P46934 MRPS18CP4-201ENST00000535821 231 ntBASIC0.75□□□□□ -2.29
NEDD4P46934 RN7SL793P-201ENST00000583259 296 ntBASIC0.75□□□□□ -2.29
NEDD4P46934 AC242498.1-201ENST00000604134 111 ntBASIC0.75□□□□□ -2.29
NEDD4P46934 AL590095.2-201ENST00000604136 117 ntBASIC0.75□□□□□ -2.29
NEDD4P46934 RNU6-94P-201ENST00000607728 107 ntBASIC0.75□□□□□ -2.29
NEDD4P46934 MIR1-1-201ENST00000362147 71 ntBASIC0.74□□□□□ -2.29
NEDD4P46934 Y_RNA.188-201ENST00000363952 111 ntBASIC0.74□□□□□ -2.29
NEDD4P46934 MIR548I3-201ENST00000408378 149 ntBASIC0.74□□□□□ -2.29
NEDD4P46934 RNA5SP95-201ENST00000410319 137 ntBASIC0.74□□□□□ -2.29
NEDD4P46934 AC090844.1-201ENST00000422019 156 ntBASIC0.74□□□□□ -2.29
NEDD4P46934 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.74□□□□□ -2.29
NEDD4P46934 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
NEDD4P46934 MIR411-201ENST00000362239 96 ntBASIC0.73□□□□□ -2.29
NEDD4P46934 RNU6-1020P-201ENST00000363684 107 ntBASIC0.73□□□□□ -2.29
NEDD4P46934 SNORA25.7-201ENST00000364375 127 ntBASIC0.73□□□□□ -2.29
NEDD4P46934 MIR608-201ENST00000384820 100 ntBASIC0.73□□□□□ -2.29
NEDD4P46934 AL138752.1-201ENST00000452964 351 ntBASIC0.73□□□□□ -2.29
NEDD4P46934 MIR3152-201ENST00000579801 74 ntBASIC0.73□□□□□ -2.29
NEDD4P46934 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.73□□□□□ -2.29
NEDD4P46934 AC141273.2-201ENST00000618989 130 ntBASIC0.73□□□□□ -2.29
NEDD4P46934 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.73□□□□□ -2.29
NEDD4P46934 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 RNA5SP499-201ENST00000363982 119 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 RNU6-312P-201ENST00000364629 107 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 MIR624-201ENST00000385217 97 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 RNU6-205P-201ENST00000390858 107 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 SNORD89-201ENST00000390981 114 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 snosnR66.1-201ENST00000391095 99 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 MIR1827-201ENST00000408549 66 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 RNA5SP127-201ENST00000411051 133 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 RNU2-64P-201ENST00000411315 191 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 AC113410.1-201ENST00000505029 247 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 ACA64.5-201ENST00000516207 127 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 MIR4431-201ENST00000579990 94 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 U6.106-201ENST00000636360 105 ntBASIC0.72□□□□□ -2.29
NEDD4P46934 MIR342-201ENST00000362212 99 ntBASIC0.71□□□□□ -2.3
NEDD4P46934 RNU6-934P-201ENST00000365154 107 ntBASIC0.71□□□□□ -2.3
NEDD4P46934 Y_RNA.412-201ENST00000384001 104 ntBASIC0.71□□□□□ -2.3
NEDD4P46934 Y_RNA.515-201ENST00000384535 112 ntBASIC0.71□□□□□ -2.3
NEDD4P46934 RNU6-602P-201ENST00000411155 105 ntBASIC0.71□□□□□ -2.3
NEDD4P46934 MIR18B-201ENST00000454574 71 ntBASIC0.71□□□□□ -2.3
NEDD4P46934 RNU7-70P-201ENST00000516941 66 ntBASIC0.71□□□□□ -2.3
NEDD4P46934 RNU6-1271P-201ENST00000517049 105 ntBASIC0.71□□□□□ -2.3
NEDD4P46934 MIR6513-201ENST00000621188 64 ntBASIC0.71□□□□□ -2.3
NEDD4P46934 MIR6717-201ENST00000622747 73 ntBASIC0.71□□□□□ -2.3
NEDD4P46934 MIR376A2-201ENST00000636782 80 ntBASIC0.71□□□□□ -2.3
NEDD4P46934 RNU6-597P-201ENST00000365620 102 ntBASIC0.7□□□□□ -2.3
NEDD4P46934 Y_RNA.430-201ENST00000384081 110 ntBASIC0.7□□□□□ -2.3
NEDD4P46934 Y_RNA.521-201ENST00000384560 114 ntBASIC0.7□□□□□ -2.3
NEDD4P46934 Y_RNA.552-201ENST00000384665 112 ntBASIC0.7□□□□□ -2.3
NEDD4P46934 MIR216A-201ENST00000385063 110 ntBASIC0.7□□□□□ -2.3
NEDD4P46934 RPS26P5-201ENST00000418544 335 ntBASIC0.7□□□□□ -2.3
NEDD4P46934 SEPT7P4-201ENST00000437076 306 ntBASIC0.7□□□□□ -2.3
NEDD4P46934 RNU7-62P-201ENST00000458856 62 ntBASIC0.7□□□□□ -2.3
NEDD4P46934 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.7□□□□□ -2.3
NEDD4P46934 AL353765.1-201ENST00000605514 183 ntBASIC0.7□□□□□ -2.3
NEDD4P46934 Y_RNA.476-201ENST00000384347 108 ntBASIC0.69□□□□□ -2.3
NEDD4P46934 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
NEDD4P46934 RNU6-1319P-201ENST00000390855 104 ntBASIC0.69□□□□□ -2.3
NEDD4P46934 RNU6-747P-201ENST00000390928 104 ntBASIC0.69□□□□□ -2.3
NEDD4P46934 RNU6-241P-201ENST00000391148 104 ntBASIC0.69□□□□□ -2.3
NEDD4P46934 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 239.4 ms