Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 RNU6-597P-201ENST00000365620 102 ntBASIC0.87□□□□□ -2.27
SOX3P41225 MT-TN-201ENST00000387400 73 ntBASIC0.87□□□□□ -2.27
SOX3P41225 SNORD111-201ENST00000408139 94 ntBASIC0.87□□□□□ -2.27
SOX3P41225 RNU7-45P-201ENST00000459460 63 ntBASIC0.87□□□□□ -2.27
SOX3P41225 SNORD124-201ENST00000459577 104 ntBASIC0.87□□□□□ -2.27
SOX3P41225 Y_RNA.662-201ENST00000516028 97 ntBASIC0.87□□□□□ -2.27
SOX3P41225 MTND5P41-201ENST00000517498 206 ntBASIC0.87□□□□□ -2.27
SOX3P41225 AC036111.3-201ENST00000526389 112 ntBASIC0.87□□□□□ -2.27
SOX3P41225 AC106800.4-201ENST00000614905 153 ntBASIC0.87□□□□□ -2.27
SOX3P41225 SNORD113.3-201ENST00000364630 78 ntBASIC0.86□□□□□ -2.27
SOX3P41225 Y_RNA.272-201ENST00000364696 102 ntBASIC0.86□□□□□ -2.27
SOX3P41225 Y_RNA.351-201ENST00000365436 96 ntBASIC0.86□□□□□ -2.27
SOX3P41225 RNU6-125P-201ENST00000384505 107 ntBASIC0.86□□□□□ -2.27
SOX3P41225 MIR520E-201ENST00000384867 87 ntBASIC0.86□□□□□ -2.27
SOX3P41225 RNU6-239P-201ENST00000390990 99 ntBASIC0.86□□□□□ -2.27
SOX3P41225 RNU6-588P-201ENST00000410281 105 ntBASIC0.86□□□□□ -2.27
SOX3P41225 RNA5SP95-201ENST00000410319 137 ntBASIC0.86□□□□□ -2.27
SOX3P41225 RNU2-11P-201ENST00000459191 187 ntBASIC0.86□□□□□ -2.27
SOX3P41225 RNU6-182P-201ENST00000516970 105 ntBASIC0.86□□□□□ -2.27
SOX3P41225 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.86□□□□□ -2.27
SOX3P41225 AC023827.1-201ENST00000569247 97 ntBASIC0.86□□□□□ -2.27
SOX3P41225 Z97988.1-201ENST00000637697 135 ntBASIC0.86□□□□□ -2.27
SOX3P41225 AL391516.1-201ENST00000554380 2449 ntBASIC0.86□□□□□ -2.27
SOX3P41225 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SOX3P41225 Y_RNA.52-201ENST00000362760 96 ntBASIC0.85□□□□□ -2.27
SOX3P41225 RNU6-580P-201ENST00000365159 107 ntBASIC0.85□□□□□ -2.27
SOX3P41225 Y_RNA.393-201ENST00000383936 102 ntBASIC0.85□□□□□ -2.27
SOX3P41225 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
SOX3P41225 MIR624-201ENST00000385217 97 ntBASIC0.85□□□□□ -2.27
SOX3P41225 SNORA26.6-201ENST00000391256 115 ntBASIC0.85□□□□□ -2.27
SOX3P41225 MIR548I3-201ENST00000408378 149 ntBASIC0.85□□□□□ -2.27
SOX3P41225 MIR548I1-201ENST00000408810 149 ntBASIC0.85□□□□□ -2.27
SOX3P41225 AC244023.1-201ENST00000426884 112 ntBASIC0.85□□□□□ -2.27
SOX3P41225 RNU7-80P-201ENST00000459562 61 ntBASIC0.85□□□□□ -2.27
SOX3P41225 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
SOX3P41225 AC107027.2-201ENST00000512197 115 ntBASIC0.85□□□□□ -2.27
SOX3P41225 RNA5SP236-201ENST00000516169 116 ntBASIC0.85□□□□□ -2.27
SOX3P41225 AC242498.1-201ENST00000604134 111 ntBASIC0.85□□□□□ -2.27
SOX3P41225 uc_338.6-201ENST00000613544 171 ntBASIC0.85□□□□□ -2.27
SOX3P41225 AC021753.1-201ENST00000635724 168 ntBASIC0.85□□□□□ -2.27
SOX3P41225 MIR377-201ENST00000362145 69 ntBASIC0.84□□□□□ -2.27
SOX3P41225 MIR342-201ENST00000362212 99 ntBASIC0.84□□□□□ -2.27
SOX3P41225 Y_RNA.168-201ENST00000363740 102 ntBASIC0.84□□□□□ -2.27
SOX3P41225 SNORA25.7-201ENST00000364375 127 ntBASIC0.84□□□□□ -2.27
SOX3P41225 Y_RNA.251-201ENST00000364551 99 ntBASIC0.84□□□□□ -2.27
SOX3P41225 Y_RNA.398-201ENST00000383952 99 ntBASIC0.84□□□□□ -2.27
SOX3P41225 Y_RNA.497-201ENST00000384447 98 ntBASIC0.84□□□□□ -2.27
SOX3P41225 Y_RNA.521-201ENST00000384560 114 ntBASIC0.84□□□□□ -2.27
SOX3P41225 RNA5SP127-201ENST00000411051 133 ntBASIC0.84□□□□□ -2.27
SOX3P41225 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.84□□□□□ -2.27
SOX3P41225 RNU7-197P-201ENST00000458836 62 ntBASIC0.84□□□□□ -2.27
SOX3P41225 RPS29P1-201ENST00000465274 159 ntBASIC0.84□□□□□ -2.27
SOX3P41225 RNU6-1149P-201ENST00000516810 97 ntBASIC0.84□□□□□ -2.27
SOX3P41225 RNU6-255P-201ENST00000516957 105 ntBASIC0.84□□□□□ -2.27
SOX3P41225 MIR3144-201ENST00000579460 79 ntBASIC0.84□□□□□ -2.27
SOX3P41225 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
SOX3P41225 AL020996.3-201ENST00000606617 222 ntBASIC0.84□□□□□ -2.27
SOX3P41225 AC091932.4-201ENST00000623386 200 ntBASIC0.84□□□□□ -2.27
SOX3P41225 MIR373-201ENST00000362273 69 ntBASIC0.83□□□□□ -2.28
SOX3P41225 Y_RNA.8-201ENST00000362353 102 ntBASIC0.83□□□□□ -2.28
SOX3P41225 Y_RNA.454-201ENST00000384224 113 ntBASIC0.83□□□□□ -2.28
SOX3P41225 SNORD38B-201ENST00000384690 67 ntBASIC0.83□□□□□ -2.28
SOX3P41225 FABP5P4-201ENST00000437203 171 ntBASIC0.83□□□□□ -2.28
SOX3P41225 MIR4264-201ENST00000583520 66 ntBASIC0.83□□□□□ -2.28
SOX3P41225 AP000753.3-201ENST00000604083 169 ntBASIC0.83□□□□□ -2.28
SOX3P41225 AC098479.1-201ENST00000609225 154 ntBASIC0.83□□□□□ -2.28
SOX3P41225 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
SOX3P41225 AC012676.2-201ENST00000619258 186 ntBASIC0.83□□□□□ -2.28
SOX3P41225 SNORD38B-202ENST00000625943 69 ntBASIC0.83□□□□□ -2.28
SOX3P41225 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
SOX3P41225 MIR302B-201ENST00000362188 73 ntBASIC0.82□□□□□ -2.28
SOX3P41225 Y_RNA.337-201ENST00000365312 102 ntBASIC0.82□□□□□ -2.28
SOX3P41225 SNORA2B-201ENST00000384583 137 ntBASIC0.82□□□□□ -2.28
SOX3P41225 Y_RNA.555-201ENST00000384673 110 ntBASIC0.82□□□□□ -2.28
SOX3P41225 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
SOX3P41225 snoU13.21-201ENST00000459368 105 ntBASIC0.82□□□□□ -2.28
SOX3P41225 UBL5P1-201ENST00000507979 193 ntBASIC0.82□□□□□ -2.28
SOX3P41225 Y_RNA.686-201ENST00000516548 134 ntBASIC0.82□□□□□ -2.28
SOX3P41225 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
SOX3P41225 MIR3668-201ENST00000582138 75 ntBASIC0.82□□□□□ -2.28
SOX3P41225 DNAJC19P2-201ENST00000593340 302 ntBASIC0.82□□□□□ -2.28
SOX3P41225 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
SOX3P41225 Y_RNA.170-201ENST00000363746 110 ntBASIC0.81□□□□□ -2.28
SOX3P41225 Y_RNA.180-201ENST00000363867 113 ntBASIC0.81□□□□□ -2.28
SOX3P41225 SNORA1.1-201ENST00000364671 133 ntBASIC0.81□□□□□ -2.28
SOX3P41225 Y_RNA.270-201ENST00000364693 104 ntBASIC0.81□□□□□ -2.28
SOX3P41225 RNU4-11P-201ENST00000365287 132 ntBASIC0.81□□□□□ -2.28
SOX3P41225 Y_RNA.357-201ENST00000365487 109 ntBASIC0.81□□□□□ -2.28
SOX3P41225 SNORD116-18-201ENST00000383961 92 ntBASIC0.81□□□□□ -2.28
SOX3P41225 Y_RNA.580-201ENST00000391004 95 ntBASIC0.81□□□□□ -2.28
SOX3P41225 MIR942-201ENST00000401111 86 ntBASIC0.81□□□□□ -2.28
SOX3P41225 RNU6-602P-201ENST00000411155 105 ntBASIC0.81□□□□□ -2.28
SOX3P41225 RNA5SP272-201ENST00000516095 111 ntBASIC0.81□□□□□ -2.28
SOX3P41225 MIR4661-201ENST00000582720 75 ntBASIC0.81□□□□□ -2.28
SOX3P41225 MIR6717-201ENST00000622747 73 ntBASIC0.81□□□□□ -2.28
SOX3P41225 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.81□□□□□ -2.28
SOX3P41225 MIR6844-201ENST00000637122 62 ntBASIC0.81□□□□□ -2.28
SOX3P41225 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SOX3P41225 AL596211.1-201ENST00000569873 2277 ntBASIC0.8□□□□□ -2.28
SOX3P41225 Y_RNA.116-201ENST00000363292 103 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms