Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RNU2-11P-201ENST00000459191 187 ntBASIC0.52□□□□□ -2.33
TRIM23P36406 snoU13.2-201ENST00000459201 104 ntBASIC0.52□□□□□ -2.33
TRIM23P36406 RNU7-80P-201ENST00000459562 61 ntBASIC0.52□□□□□ -2.33
TRIM23P36406 AL442067.1-201ENST00000613261 223 ntBASIC0.52□□□□□ -2.33
TRIM23P36406 RNU6-238P-201ENST00000363313 106 ntBASIC0.51□□□□□ -2.33
TRIM23P36406 Y_RNA.556-201ENST00000384677 113 ntBASIC0.51□□□□□ -2.33
TRIM23P36406 Y_RNA.618-201ENST00000410949 107 ntBASIC0.51□□□□□ -2.33
TRIM23P36406 Y_RNA.622-201ENST00000411091 108 ntBASIC0.51□□□□□ -2.33
TRIM23P36406 HMGN1P33-201ENST00000432945 451 ntBASIC0.51□□□□□ -2.33
TRIM23P36406 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.51□□□□□ -2.33
TRIM23P36406 MTATP8P1-201ENST00000467115 207 ntBASIC0.51□□□□□ -2.33
TRIM23P36406 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.51□□□□□ -2.33
TRIM23P36406 SNORA62.5-201ENST00000516634 120 ntBASIC0.51□□□□□ -2.33
TRIM23P36406 RNU6-453P-201ENST00000516819 85 ntBASIC0.51□□□□□ -2.33
TRIM23P36406 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.51□□□□□ -2.33
TRIM23P36406 MIR4711-201ENST00000578274 70 ntBASIC0.51□□□□□ -2.33
TRIM23P36406 MIR4804-201ENST00000581683 73 ntBASIC0.51□□□□□ -2.33
TRIM23P36406 AL365205.2-201ENST00000594586 68 ntBASIC0.51□□□□□ -2.33
TRIM23P36406 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
TRIM23P36406 Y_RNA.115-201ENST00000363272 98 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 Y_RNA.149-201ENST00000363558 117 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 SNORA36.2-201ENST00000384004 127 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 RNU6-1011P-201ENST00000384668 107 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 MIR520F-201ENST00000384824 87 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 MT-TF-201ENST00000387314 71 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 RNU6-1165P-201ENST00000410119 107 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 SNORD83.1-201ENST00000411362 77 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 snoU13.21-201ENST00000459368 105 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 MIR4771-2-201ENST00000577758 74 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 MIR4771-1-201ENST00000582617 74 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 MIR4676-201ENST00000583078 72 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 MIR5197-201ENST00000583721 112 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 MIR6740-201ENST00000618268 113 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.5□□□□□ -2.33
TRIM23P36406 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
TRIM23P36406 Y_RNA.23-201ENST00000362496 106 ntBASIC0.49□□□□□ -2.33
TRIM23P36406 Y_RNA.68-201ENST00000362881 102 ntBASIC0.49□□□□□ -2.33
TRIM23P36406 RNU6-716P-201ENST00000365621 103 ntBASIC0.49□□□□□ -2.33
TRIM23P36406 Y_RNA.430-201ENST00000384081 110 ntBASIC0.49□□□□□ -2.33
TRIM23P36406 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
TRIM23P36406 MIR588-201ENST00000384900 83 ntBASIC0.49□□□□□ -2.33
TRIM23P36406 MIR520H-201ENST00000385126 88 ntBASIC0.49□□□□□ -2.33
TRIM23P36406 MIR938-201ENST00000401216 83 ntBASIC0.49□□□□□ -2.33
TRIM23P36406 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.49□□□□□ -2.33
TRIM23P36406 RNU7-56P-201ENST00000458744 62 ntBASIC0.49□□□□□ -2.33
TRIM23P36406 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
TRIM23P36406 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
TRIM23P36406 AC008737.2-201ENST00000599446 118 ntBASIC0.49□□□□□ -2.33
TRIM23P36406 AC011921.3-201ENST00000605540 361 ntBASIC0.49□□□□□ -2.33
TRIM23P36406 MIR8087-201ENST00000612745 78 ntBASIC0.49□□□□□ -2.33
TRIM23P36406 AC243829.3-201ENST00000622177 108 ntBASIC0.49□□□□□ -2.33
TRIM23P36406 MIR302B-201ENST00000362188 73 ntBASIC0.48□□□□□ -2.33
TRIM23P36406 Y_RNA.47-201ENST00000362697 108 ntBASIC0.48□□□□□ -2.33
TRIM23P36406 Y_RNA.351-201ENST00000365436 96 ntBASIC0.48□□□□□ -2.33
TRIM23P36406 Y_RNA.416-201ENST00000384014 113 ntBASIC0.48□□□□□ -2.33
TRIM23P36406 SNORA1-201ENST00000384107 130 ntBASIC0.48□□□□□ -2.33
TRIM23P36406 Y_RNA.562-201ENST00000384695 113 ntBASIC0.48□□□□□ -2.33
TRIM23P36406 SNORD58.1-201ENST00000391313 66 ntBASIC0.48□□□□□ -2.33
TRIM23P36406 AL358176.2-201ENST00000425769 204 ntBASIC0.48□□□□□ -2.33
TRIM23P36406 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
TRIM23P36406 RNU6-229P-201ENST00000516614 102 ntBASIC0.48□□□□□ -2.33
TRIM23P36406 MIR4744-201ENST00000581563 82 ntBASIC0.48□□□□□ -2.33
TRIM23P36406 MIR6717-201ENST00000622747 73 ntBASIC0.48□□□□□ -2.33
TRIM23P36406 Y_RNA.121-201ENST00000363309 113 ntBASIC0.47□□□□□ -2.33
TRIM23P36406 Y_RNA.178-201ENST00000363832 102 ntBASIC0.47□□□□□ -2.33
TRIM23P36406 Y_RNA.288-201ENST00000364854 92 ntBASIC0.47□□□□□ -2.33
TRIM23P36406 Y_RNA.292-201ENST00000364904 97 ntBASIC0.47□□□□□ -2.33
TRIM23P36406 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
TRIM23P36406 RNU6-1237P-201ENST00000384777 107 ntBASIC0.47□□□□□ -2.33
TRIM23P36406 MIR125B2-201ENST00000385128 89 ntBASIC0.47□□□□□ -2.33
TRIM23P36406 RNU6-1319P-201ENST00000390855 104 ntBASIC0.47□□□□□ -2.33
TRIM23P36406 RNU6-747P-201ENST00000390928 104 ntBASIC0.47□□□□□ -2.33
TRIM23P36406 RNU6-241P-201ENST00000391148 104 ntBASIC0.47□□□□□ -2.33
TRIM23P36406 SNORA26.6-201ENST00000391256 115 ntBASIC0.47□□□□□ -2.33
TRIM23P36406 SNORD127-201ENST00000458892 86 ntBASIC0.47□□□□□ -2.33
TRIM23P36406 MIR3152-201ENST00000579801 74 ntBASIC0.47□□□□□ -2.33
TRIM23P36406 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
TRIM23P36406 Y_RNA.396-201ENST00000383949 103 ntBASIC0.46□□□□□ -2.34
TRIM23P36406 MIR140-201ENST00000385282 100 ntBASIC0.46□□□□□ -2.34
TRIM23P36406 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
TRIM23P36406 SNORD116-25-201ENST00000516517 92 ntBASIC0.46□□□□□ -2.34
TRIM23P36406 MIR4643-201ENST00000577473 78 ntBASIC0.46□□□□□ -2.34
TRIM23P36406 SNORD92-201ENST00000585078 85 ntBASIC0.46□□□□□ -2.34
TRIM23P36406 AC020891.4-201ENST00000605745 93 ntBASIC0.46□□□□□ -2.34
TRIM23P36406 AC010332.2-201ENST00000613083 1904 ntBASIC0.46□□□□□ -2.34
TRIM23P36406 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
TRIM23P36406 MIR330-201ENST00000362196 94 ntBASIC0.45□□□□□ -2.34
TRIM23P36406 Y_RNA.7-201ENST00000362352 102 ntBASIC0.45□□□□□ -2.34
TRIM23P36406 MIR1257-201ENST00000408490 117 ntBASIC0.45□□□□□ -2.34
TRIM23P36406 SNORD100-201ENST00000408573 76 ntBASIC0.45□□□□□ -2.34
TRIM23P36406 RNU6-447P-201ENST00000410293 104 ntBASIC0.45□□□□□ -2.34
TRIM23P36406 RNU6-1118P-201ENST00000410382 104 ntBASIC0.45□□□□□ -2.34
TRIM23P36406 RNU6-1076P-201ENST00000410397 104 ntBASIC0.45□□□□□ -2.34
TRIM23P36406 RNU6-355P-201ENST00000410427 104 ntBASIC0.45□□□□□ -2.34
TRIM23P36406 RNU6-791P-201ENST00000410467 104 ntBASIC0.45□□□□□ -2.34
TRIM23P36406 RNU6-705P-201ENST00000410601 104 ntBASIC0.45□□□□□ -2.34
TRIM23P36406 RNU6-1100P-201ENST00000410691 104 ntBASIC0.45□□□□□ -2.34
TRIM23P36406 RNU6-860P-201ENST00000410860 104 ntBASIC0.45□□□□□ -2.34
TRIM23P36406 RNU6-1217P-201ENST00000411276 104 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms