Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNU6-1190P-201ENST00000410811 104 ntBASIC0.66□□□□□ -2.3
HMGCLP35914 RPS3AP1-201ENST00000413190 320 ntBASIC0.66□□□□□ -2.3
HMGCLP35914 RNU2-11P-201ENST00000459191 187 ntBASIC0.66□□□□□ -2.3
HMGCLP35914 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.66□□□□□ -2.3
HMGCLP35914 Y_RNA.797-201ENST00000515977 94 ntBASIC0.66□□□□□ -2.3
HMGCLP35914 AC141273.2-201ENST00000618989 130 ntBASIC0.66□□□□□ -2.3
HMGCLP35914 U6.106-201ENST00000636360 105 ntBASIC0.66□□□□□ -2.3
HMGCLP35914 MIR6841-201ENST00000637129 72 ntBASIC0.66□□□□□ -2.3
HMGCLP35914 Y_RNA.83-201ENST00000363005 113 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 Y_RNA.226-201ENST00000364337 114 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 SNORD38B-201ENST00000384690 67 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 RNU6-1319P-201ENST00000390855 104 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 RNU6-747P-201ENST00000390928 104 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 RNU6-241P-201ENST00000391148 104 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 RNU6-177P-201ENST00000411257 104 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 HMGN1P33-201ENST00000432945 451 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 snoU13.2-201ENST00000459201 104 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 RNU7-80P-201ENST00000459562 61 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 AC133485.1-201ENST00000567176 124 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 AC138907.6-201ENST00000568401 126 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 AC130289.1-201ENST00000577321 73 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 MIR4431-201ENST00000579990 94 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 uc_338.6-201ENST00000613544 171 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 MIR6740-201ENST00000618268 113 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 MIR6717-201ENST00000622747 73 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 AC091932.4-201ENST00000623386 200 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 SNORD38B-202ENST00000625943 69 ntBASIC0.65□□□□□ -2.31
HMGCLP35914 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.65□□□□□ -2.31
HMGCLP35914 Y_RNA.182-201ENST00000363880 111 ntBASIC0.64□□□□□ -2.31
HMGCLP35914 RNU6-312P-201ENST00000364629 107 ntBASIC0.64□□□□□ -2.31
HMGCLP35914 RNU6-47P-201ENST00000383866 107 ntBASIC0.64□□□□□ -2.31
HMGCLP35914 Y_RNA.489-201ENST00000384410 101 ntBASIC0.64□□□□□ -2.31
HMGCLP35914 RNU4-70P-201ENST00000384579 139 ntBASIC0.64□□□□□ -2.31
HMGCLP35914 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
HMGCLP35914 snosnR66.1-201ENST00000391095 99 ntBASIC0.64□□□□□ -2.31
HMGCLP35914 RNA5SP127-201ENST00000411051 133 ntBASIC0.64□□□□□ -2.31
HMGCLP35914 RPS26P5-201ENST00000418544 335 ntBASIC0.64□□□□□ -2.31
HMGCLP35914 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.64□□□□□ -2.31
HMGCLP35914 MIR18B-201ENST00000454574 71 ntBASIC0.64□□□□□ -2.31
HMGCLP35914 snoU13.21-201ENST00000459368 105 ntBASIC0.64□□□□□ -2.31
HMGCLP35914 AL136317.1-201ENST00000612653 226 ntBASIC0.64□□□□□ -2.31
HMGCLP35914 SNORA1.1-201ENST00000364671 133 ntBASIC0.63□□□□□ -2.31
HMGCLP35914 Y_RNA.274-201ENST00000364714 101 ntBASIC0.63□□□□□ -2.31
HMGCLP35914 Y_RNA.351-201ENST00000365436 96 ntBASIC0.63□□□□□ -2.31
HMGCLP35914 Y_RNA.401-201ENST00000383965 117 ntBASIC0.63□□□□□ -2.31
HMGCLP35914 Y_RNA.454-201ENST00000384224 113 ntBASIC0.63□□□□□ -2.31
HMGCLP35914 RNU6-205P-201ENST00000390858 107 ntBASIC0.63□□□□□ -2.31
HMGCLP35914 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.63□□□□□ -2.31
HMGCLP35914 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
HMGCLP35914 AC004812.1-201ENST00000540773 146 ntBASIC0.63□□□□□ -2.31
HMGCLP35914 MIR151B-201ENST00000584249 96 ntBASIC0.63□□□□□ -2.31
HMGCLP35914 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
HMGCLP35914 MIR30D-201ENST00000362283 70 ntBASIC0.62□□□□□ -2.31
HMGCLP35914 RNU6-379P-201ENST00000363813 104 ntBASIC0.62□□□□□ -2.31
HMGCLP35914 Y_RNA.224-201ENST00000364308 111 ntBASIC0.62□□□□□ -2.31
HMGCLP35914 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
HMGCLP35914 RNA5SP261-201ENST00000410536 106 ntBASIC0.62□□□□□ -2.31
HMGCLP35914 AL138752.1-201ENST00000452964 351 ntBASIC0.62□□□□□ -2.31
HMGCLP35914 RNU7-62P-201ENST00000458856 62 ntBASIC0.62□□□□□ -2.31
HMGCLP35914 RNU7-121P-201ENST00000516604 62 ntBASIC0.62□□□□□ -2.31
HMGCLP35914 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.62□□□□□ -2.31
HMGCLP35914 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.62□□□□□ -2.31
HMGCLP35914 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
HMGCLP35914 Y_RNA.188-201ENST00000363952 111 ntBASIC0.61□□□□□ -2.31
HMGCLP35914 Y_RNA.233-201ENST00000364407 101 ntBASIC0.61□□□□□ -2.31
HMGCLP35914 RNU6-110P-201ENST00000384508 104 ntBASIC0.61□□□□□ -2.31
HMGCLP35914 SNORD105-201ENST00000386910 85 ntBASIC0.61□□□□□ -2.31
HMGCLP35914 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.61□□□□□ -2.31
HMGCLP35914 MIR1287-201ENST00000408492 90 ntBASIC0.61□□□□□ -2.31
HMGCLP35914 RNA5SP236-201ENST00000516169 116 ntBASIC0.61□□□□□ -2.31
HMGCLP35914 Y_RNA.700-201ENST00000516806 100 ntBASIC0.61□□□□□ -2.31
HMGCLP35914 AL078603.1-201ENST00000603824 313 ntBASIC0.61□□□□□ -2.31
HMGCLP35914 RMST_2.1-201ENST00000617263 136 ntBASIC0.61□□□□□ -2.31
HMGCLP35914 MIR1-1-201ENST00000362147 71 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 RNU6-1020P-201ENST00000363684 107 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 RNU6-934P-201ENST00000365154 107 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 Y_RNA.393-201ENST00000383936 102 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 MIR588-201ENST00000384900 83 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 MIR605-201ENST00000385078 83 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 RNU6-1165P-201ENST00000410119 107 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 RNU6-994P-201ENST00000410507 111 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 AC244098.3-201ENST00000424803 96 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 AC067940.1-201ENST00000458411 300 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 RNU6-1219P-201ENST00000516143 112 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 MIR4804-201ENST00000581683 73 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 AC072026.1-201ENST00000605023 201 ntBASIC0.6□□□□□ -2.31
HMGCLP35914 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
HMGCLP35914 SNORA25.7-201ENST00000364375 127 ntBASIC0.59□□□□□ -2.31
HMGCLP35914 Y_RNA.240-201ENST00000364469 95 ntBASIC0.59□□□□□ -2.31
HMGCLP35914 RNU6-200P-201ENST00000364743 107 ntBASIC0.59□□□□□ -2.31
HMGCLP35914 Y_RNA.354-201ENST00000365448 111 ntBASIC0.59□□□□□ -2.31
HMGCLP35914 Y_RNA.441-201ENST00000384123 112 ntBASIC0.59□□□□□ -2.31
HMGCLP35914 SNORD12C-201ENST00000386307 89 ntBASIC0.59□□□□□ -2.31
HMGCLP35914 MT-TF-201ENST00000387314 71 ntBASIC0.59□□□□□ -2.31
HMGCLP35914 SNORD99-201ENST00000408612 74 ntBASIC0.59□□□□□ -2.31
HMGCLP35914 Y_RNA.644-201ENST00000459006 113 ntBASIC0.59□□□□□ -2.31
HMGCLP35914 Y_RNA.674-201ENST00000516362 113 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms