Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3□□□□□ -1.93
CLCN1P35523 RNU7-41P-201ENST00000515917 61 ntBASIC3□□□□□ -1.93
CLCN1P35523 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3□□□□□ -1.93
CLCN1P35523 MIR5588-201ENST00000581890 63 ntBASIC3□□□□□ -1.93
CLCN1P35523 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CLCN1P35523 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CLCN1P35523 MIR1255A-201ENST00000408338 113 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 RNU6-447P-201ENST00000410293 104 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 RNU6-1118P-201ENST00000410382 104 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 RNU6-1076P-201ENST00000410397 104 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 RNA5SP237-201ENST00000410414 113 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 RNU6-355P-201ENST00000410427 104 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 RNU6-791P-201ENST00000410467 104 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 RNU6-705P-201ENST00000410601 104 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 RNU6-1100P-201ENST00000410691 104 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 RNU6-860P-201ENST00000410860 104 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 RNU6-1217P-201ENST00000411276 104 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 RNU6-785P-201ENST00000411324 104 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 SPINT5P-201ENST00000448174 155 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCN1P35523 U6.90-201ENST00000614007 104 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 SEPT14P17-201ENST00000617978 177 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 U6.70-201ENST00000620287 104 ntBASIC2.99□□□□□ -1.93
CLCN1P35523 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLCN1P35523 RNA5SP126-201ENST00000365092 109 ntBASIC2.98□□□□□ -1.93
CLCN1P35523 RNA5SP259-201ENST00000365541 109 ntBASIC2.98□□□□□ -1.93
CLCN1P35523 MIR194-1-201ENST00000384892 85 ntBASIC2.98□□□□□ -1.93
CLCN1P35523 MIR653-201ENST00000385279 96 ntBASIC2.98□□□□□ -1.93
CLCN1P35523 RNA5SP210-201ENST00000391034 120 ntBASIC2.98□□□□□ -1.93
CLCN1P35523 AC019129.1-201ENST00000403786 261 ntBASIC2.98□□□□□ -1.93
CLCN1P35523 MIR548G-201ENST00000408442 89 ntBASIC2.98□□□□□ -1.93
CLCN1P35523 Y_RNA.620-201ENST00000411009 88 ntBASIC2.98□□□□□ -1.93
CLCN1P35523 RNU6-90P-201ENST00000606352 106 ntBASIC2.98□□□□□ -1.93
CLCN1P35523 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CLCN1P35523 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CLCN1P35523 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLCN1P35523 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLCN1P35523 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLCN1P35523 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLCN1P35523 Y_RNA.98-201ENST00000363109 102 ntBASIC2.97□□□□□ -1.93
CLCN1P35523 RNU6-979P-201ENST00000383896 107 ntBASIC2.97□□□□□ -1.93
CLCN1P35523 SNORD38.2-201ENST00000384470 69 ntBASIC2.97□□□□□ -1.93
CLCN1P35523 Y_RNA.567-201ENST00000384736 106 ntBASIC2.97□□□□□ -1.93
CLCN1P35523 MIR144-201ENST00000384886 86 ntBASIC2.97□□□□□ -1.93
CLCN1P35523 RNU7-48P-201ENST00000458875 63 ntBASIC2.97□□□□□ -1.93
CLCN1P35523 AC121758.2-201ENST00000553271 193 ntBASIC2.97□□□□□ -1.93
CLCN1P35523 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLCN1P35523 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLCN1P35523 AC079804.2-201ENST00000490376 200 ntBASIC2.96□□□□□ -1.94
CLCN1P35523 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.96□□□□□ -1.94
CLCN1P35523 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CLCN1P35523 RNU6-1244P-201ENST00000363614 108 ntBASIC2.95□□□□□ -1.94
CLCN1P35523 RNU1-112P-201ENST00000364401 164 ntBASIC2.95□□□□□ -1.94
CLCN1P35523 RNA5SP138-201ENST00000365098 114 ntBASIC2.95□□□□□ -1.94
CLCN1P35523 MIR513A1-201ENST00000385138 129 ntBASIC2.95□□□□□ -1.94
CLCN1P35523 AC027119.1-201ENST00000440877 241 ntBASIC2.95□□□□□ -1.94
CLCN1P35523 AC009474.2-201ENST00000451383 136 ntBASIC2.95□□□□□ -1.94
CLCN1P35523 SNORD111.1-201ENST00000516421 86 ntBASIC2.95□□□□□ -1.94
CLCN1P35523 RNU2-19P-201ENST00000517288 84 ntBASIC2.95□□□□□ -1.94
CLCN1P35523 MTND5P40-201ENST00000559945 246 ntBASIC2.95□□□□□ -1.94
CLCN1P35523 Z82195.2-201ENST00000612348 18351 ntBASIC2.94□□□□□ -1.94
CLCN1P35523 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.94□□□□□ -1.94
CLCN1P35523 AC079600.2-201ENST00000550076 130 ntBASIC2.94□□□□□ -1.94
CLCN1P35523 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.94□□□□□ -1.94
CLCN1P35523 MIR4672-201ENST00000583126 81 ntBASIC2.94□□□□□ -1.94
CLCN1P35523 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLCN1P35523 MIR449A-201ENST00000362113 91 ntBASIC2.93□□□□□ -1.94
CLCN1P35523 RNY1P13-201ENST00000365030 105 ntBASIC2.93□□□□□ -1.94
CLCN1P35523 Y_RNA.609-201ENST00000410669 89 ntBASIC2.93□□□□□ -1.94
CLCN1P35523 MIR5092-201ENST00000583139 88 ntBASIC2.93□□□□□ -1.94
CLCN1P35523 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.93□□□□□ -1.94
CLCN1P35523 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CLCN1P35523 AC131280.1-202ENST00000624067 4211 ntBASIC2.92□□□□□ -1.94
CLCN1P35523 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
CLCN1P35523 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLCN1P35523 RNA5SP276-201ENST00000362580 94 ntBASIC2.92□□□□□ -1.94
CLCN1P35523 RNA5SP48-201ENST00000363969 126 ntBASIC2.92□□□□□ -1.94
CLCN1P35523 Y_RNA.426-201ENST00000384068 113 ntBASIC2.92□□□□□ -1.94
CLCN1P35523 Y_RNA.611-201ENST00000410682 108 ntBASIC2.92□□□□□ -1.94
CLCN1P35523 RNU1-98P-201ENST00000458992 160 ntBASIC2.92□□□□□ -1.94
CLCN1P35523 RNU7-171P-201ENST00000459581 62 ntBASIC2.92□□□□□ -1.94
CLCN1P35523 AC141846.1-201ENST00000568348 142 ntBASIC2.92□□□□□ -1.94
CLCN1P35523 MIR6895-201ENST00000613497 78 ntBASIC2.92□□□□□ -1.94
CLCN1P35523 AP001362.1-201ENST00000625165 124 ntBASIC2.92□□□□□ -1.94
CLCN1P35523 Y_RNA.191-201ENST00000363972 113 ntBASIC2.91□□□□□ -1.94
CLCN1P35523 Y_RNA.437-201ENST00000384113 113 ntBASIC2.91□□□□□ -1.94
CLCN1P35523 AL138827.1-201ENST00000402666 306 ntBASIC2.91□□□□□ -1.94
CLCN1P35523 AC055731.1-201ENST00000474387 401 ntBASIC2.91□□□□□ -1.94
CLCN1P35523 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.91□□□□□ -1.94
CLCN1P35523 AC133485.1-201ENST00000567176 124 ntBASIC2.91□□□□□ -1.94
CLCN1P35523 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CLCN1P35523 AC012676.2-201ENST00000619258 186 ntBASIC2.91□□□□□ -1.94
CLCN1P35523 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLCN1P35523 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
CLCN1P35523 RNA5SP432-201ENST00000362480 116 ntBASIC2.9□□□□□ -1.95
CLCN1P35523 JTBP1-201ENST00000441314 247 ntBASIC2.9□□□□□ -1.95
CLCN1P35523 RNA5SP445-201ENST00000515889 115 ntBASIC2.9□□□□□ -1.95
CLCN1P35523 RNU6-922P-201ENST00000516753 99 ntBASIC2.9□□□□□ -1.95
CLCN1P35523 MIR5694-201ENST00000581190 76 ntBASIC2.9□□□□□ -1.95
CLCN1P35523 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms