Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RNU6-785P-201ENST00000411324 104 ntBASIC0.62□□□□□ -2.31
HOXD13P35453 AL121914.1-201ENST00000450188 156 ntBASIC0.62□□□□□ -2.31
HOXD13P35453 MIR3129-201ENST00000581095 76 ntBASIC0.62□□□□□ -2.31
HOXD13P35453 U6.90-201ENST00000614007 104 ntBASIC0.62□□□□□ -2.31
HOXD13P35453 AC022709.1-201ENST00000615967 87 ntBASIC0.62□□□□□ -2.31
HOXD13P35453 MIR6740-201ENST00000618268 113 ntBASIC0.62□□□□□ -2.31
HOXD13P35453 U6.70-201ENST00000620287 104 ntBASIC0.62□□□□□ -2.31
HOXD13P35453 Y_RNA.396-201ENST00000383949 103 ntBASIC0.61□□□□□ -2.31
HOXD13P35453 RNU6-1223P-201ENST00000517124 104 ntBASIC0.61□□□□□ -2.31
HOXD13P35453 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
HOXD13P35453 MIR5197-201ENST00000583721 112 ntBASIC0.61□□□□□ -2.31
HOXD13P35453 AC020891.4-201ENST00000605745 93 ntBASIC0.61□□□□□ -2.31
HOXD13P35453 MIR6717-201ENST00000622747 73 ntBASIC0.61□□□□□ -2.31
HOXD13P35453 RNU6-738P-201ENST00000384531 106 ntBASIC0.6□□□□□ -2.31
HOXD13P35453 SNORA20-201ENST00000384662 132 ntBASIC0.6□□□□□ -2.31
HOXD13P35453 MIR125B2-201ENST00000385128 89 ntBASIC0.6□□□□□ -2.31
HOXD13P35453 MIR140-201ENST00000385282 100 ntBASIC0.6□□□□□ -2.31
HOXD13P35453 AC015818.7-201ENST00000428754 109 ntBASIC0.6□□□□□ -2.31
HOXD13P35453 AC087499.7-201ENST00000441958 109 ntBASIC0.6□□□□□ -2.31
HOXD13P35453 RPL39P25-201ENST00000449384 154 ntBASIC0.6□□□□□ -2.31
HOXD13P35453 RNU7-56P-201ENST00000458744 62 ntBASIC0.6□□□□□ -2.31
HOXD13P35453 SNORD127-201ENST00000458892 86 ntBASIC0.6□□□□□ -2.31
HOXD13P35453 SNORD116-25-201ENST00000516517 92 ntBASIC0.6□□□□□ -2.31
HOXD13P35453 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
HOXD13P35453 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
HOXD13P35453 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
HOXD13P35453 Y_RNA.508-201ENST00000384502 114 ntBASIC0.59□□□□□ -2.31
HOXD13P35453 RNU6-1237P-201ENST00000384777 107 ntBASIC0.59□□□□□ -2.31
HOXD13P35453 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
HOXD13P35453 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.59□□□□□ -2.31
HOXD13P35453 RNU7-185P-201ENST00000459215 60 ntBASIC0.59□□□□□ -2.31
HOXD13P35453 MIR3612-201ENST00000579753 87 ntBASIC0.59□□□□□ -2.31
HOXD13P35453 AL365205.2-201ENST00000594586 68 ntBASIC0.59□□□□□ -2.31
HOXD13P35453 AL078603.1-201ENST00000603824 313 ntBASIC0.59□□□□□ -2.31
HOXD13P35453 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
HOXD13P35453 RNU6-694P-201ENST00000364071 147 ntBASIC0.58□□□□□ -2.32
HOXD13P35453 SNORD12C-201ENST00000386307 89 ntBASIC0.58□□□□□ -2.32
HOXD13P35453 RNA5SP237-201ENST00000410414 113 ntBASIC0.58□□□□□ -2.32
HOXD13P35453 RNU6-1190P-201ENST00000410811 104 ntBASIC0.58□□□□□ -2.32
HOXD13P35453 RNA5SP436-201ENST00000516020 115 ntBASIC0.58□□□□□ -2.32
HOXD13P35453 RNU6-561P-201ENST00000516222 102 ntBASIC0.58□□□□□ -2.32
HOXD13P35453 RN7SKP12-201ENST00000516275 143 ntBASIC0.58□□□□□ -2.32
HOXD13P35453 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
HOXD13P35453 MIR563-201ENST00000385080 79 ntBASIC0.57□□□□□ -2.32
HOXD13P35453 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.57□□□□□ -2.32
HOXD13P35453 RNU2-38P-201ENST00000410856 79 ntBASIC0.57□□□□□ -2.32
HOXD13P35453 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.57□□□□□ -2.32
HOXD13P35453 AC098934.3-201ENST00000430450 190 ntBASIC0.57□□□□□ -2.32
HOXD13P35453 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
HOXD13P35453 Y_RNA.797-201ENST00000515977 94 ntBASIC0.57□□□□□ -2.32
HOXD13P35453 RNA5SP220-201ENST00000516298 104 ntBASIC0.57□□□□□ -2.32
HOXD13P35453 MIR378D2-201ENST00000580636 98 ntBASIC0.57□□□□□ -2.32
HOXD13P35453 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
HOXD13P35453 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
HOXD13P35453 AL596211.1-201ENST00000569873 2277 ntBASIC0.56□□□□□ -2.32
HOXD13P35453 MIR18A-201ENST00000362310 71 ntBASIC0.56□□□□□ -2.32
HOXD13P35453 Y_RNA.76-201ENST00000362931 109 ntBASIC0.56□□□□□ -2.32
HOXD13P35453 Y_RNA.121-201ENST00000363309 113 ntBASIC0.56□□□□□ -2.32
HOXD13P35453 Y_RNA.430-201ENST00000384081 110 ntBASIC0.56□□□□□ -2.32
HOXD13P35453 RNU6-578P-201ENST00000390980 103 ntBASIC0.56□□□□□ -2.32
HOXD13P35453 AL358176.2-201ENST00000425769 204 ntBASIC0.56□□□□□ -2.32
HOXD13P35453 AC092628.1-201ENST00000436250 252 ntBASIC0.56□□□□□ -2.32
HOXD13P35453 MTND1P19-201ENST00000511780 315 ntBASIC0.56□□□□□ -2.32
HOXD13P35453 RNU7-156P-201ENST00000517214 74 ntBASIC0.56□□□□□ -2.32
HOXD13P35453 MIR4643-201ENST00000577473 78 ntBASIC0.56□□□□□ -2.32
HOXD13P35453 AL162730.1-201ENST00000605734 292 ntBASIC0.56□□□□□ -2.32
HOXD13P35453 AC091932.4-201ENST00000623386 200 ntBASIC0.56□□□□□ -2.32
HOXD13P35453 RNU1-133P-201ENST00000364867 167 ntBASIC0.55□□□□□ -2.32
HOXD13P35453 Y_RNA.478-201ENST00000384358 107 ntBASIC0.55□□□□□ -2.32
HOXD13P35453 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.55□□□□□ -2.32
HOXD13P35453 SEPT7P4-201ENST00000437076 306 ntBASIC0.55□□□□□ -2.32
HOXD13P35453 RNU6-1132P-201ENST00000459214 107 ntBASIC0.55□□□□□ -2.32
HOXD13P35453 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
HOXD13P35453 Y_RNA.308-201ENST00000365043 101 ntBASIC0.54□□□□□ -2.32
HOXD13P35453 RNY4P28-201ENST00000365281 93 ntBASIC0.54□□□□□ -2.32
HOXD13P35453 RNU6-42P-201ENST00000384165 107 ntBASIC0.54□□□□□ -2.32
HOXD13P35453 Y_RNA.515-201ENST00000384535 112 ntBASIC0.54□□□□□ -2.32
HOXD13P35453 SNORA26.6-201ENST00000391256 115 ntBASIC0.54□□□□□ -2.32
HOXD13P35453 RNU6-893P-201ENST00000458841 100 ntBASIC0.54□□□□□ -2.32
HOXD13P35453 AC090897.1-201ENST00000580909 226 ntBASIC0.54□□□□□ -2.32
HOXD13P35453 SNORD92-201ENST00000585078 85 ntBASIC0.54□□□□□ -2.32
HOXD13P35453 uc_338.6-201ENST00000613544 171 ntBASIC0.54□□□□□ -2.32
HOXD13P35453 MIR30D-201ENST00000362283 70 ntBASIC0.53□□□□□ -2.32
HOXD13P35453 Y_RNA.269-201ENST00000364685 89 ntBASIC0.53□□□□□ -2.32
HOXD13P35453 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
HOXD13P35453 Y_RNA.562-201ENST00000384695 113 ntBASIC0.53□□□□□ -2.32
HOXD13P35453 MIR489-201ENST00000384923 84 ntBASIC0.53□□□□□ -2.32
HOXD13P35453 RNA5SP127-201ENST00000411051 133 ntBASIC0.53□□□□□ -2.32
HOXD13P35453 RNU7-102P-201ENST00000458948 62 ntBASIC0.53□□□□□ -2.32
HOXD13P35453 RNU7-45P-201ENST00000459460 63 ntBASIC0.53□□□□□ -2.32
HOXD13P35453 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.53□□□□□ -2.32
HOXD13P35453 AC011921.3-201ENST00000605540 361 ntBASIC0.53□□□□□ -2.32
HOXD13P35453 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.53□□□□□ -2.32
HOXD13P35453 MIR6734-201ENST00000621166 68 ntBASIC0.53□□□□□ -2.32
HOXD13P35453 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
HOXD13P35453 SNORD27-201ENST00000363981 72 ntBASIC0.52□□□□□ -2.33
HOXD13P35453 RNA5SP117-201ENST00000365294 118 ntBASIC0.52□□□□□ -2.33
HOXD13P35453 RNU6-493P-201ENST00000391321 108 ntBASIC0.52□□□□□ -2.33
HOXD13P35453 SNORD100-201ENST00000408573 76 ntBASIC0.52□□□□□ -2.33
HOXD13P35453 SNORD93-201ENST00000408813 74 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms