Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.56□□□□□ -2
RARAP10276 RNU7-43P-201ENST00000516554 64 ntBASIC2.56□□□□□ -2
RARAP10276 U1.36-201ENST00000620684 176 ntBASIC2.56□□□□□ -2
RARAP10276 Z97988.1-201ENST00000637697 135 ntBASIC2.56□□□□□ -2
RARAP10276 AP000648.3-201ENST00000623539 4507 ntBASIC2.55□□□□□ -2
RARAP10276 RNA5SP68-201ENST00000363885 119 ntBASIC2.55□□□□□ -2
RARAP10276 RNU6-219P-201ENST00000364728 107 ntBASIC2.55□□□□□ -2
RARAP10276 RNU6-1276P-201ENST00000365372 104 ntBASIC2.55□□□□□ -2
RARAP10276 RNU6-242P-201ENST00000384359 107 ntBASIC2.55□□□□□ -2
RARAP10276 U8.15-201ENST00000390947 134 ntBASIC2.55□□□□□ -2
RARAP10276 RNA5SP270-201ENST00000411361 118 ntBASIC2.55□□□□□ -2
RARAP10276 AC011753.1-201ENST00000451001 220 ntBASIC2.55□□□□□ -2
RARAP10276 AC108210.2-201ENST00000503681 201 ntBASIC2.55□□□□□ -2
RARAP10276 RNU6-267P-201ENST00000516714 103 ntBASIC2.55□□□□□ -2
RARAP10276 U4.3-201ENST00000621047 82 ntBASIC2.55□□□□□ -2
RARAP10276 AC008133.2-201ENST00000624540 351 ntBASIC2.55□□□□□ -2
RARAP10276 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
RARAP10276 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
RARAP10276 Y_RNA.140-201ENST00000363474 103 ntBASIC2.54□□□□□ -2
RARAP10276 SNORD116-10-201ENST00000363791 102 ntBASIC2.54□□□□□ -2
RARAP10276 Y_RNA.338-201ENST00000365320 114 ntBASIC2.54□□□□□ -2
RARAP10276 RNA5SP225-201ENST00000410874 135 ntBASIC2.54□□□□□ -2
RARAP10276 snoU13.23-201ENST00000458863 104 ntBASIC2.54□□□□□ -2
RARAP10276 AC234781.5-201ENST00000508429 271 ntBASIC2.54□□□□□ -2
RARAP10276 RNU6-917P-201ENST00000516294 104 ntBASIC2.54□□□□□ -2
RARAP10276 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.54□□□□□ -2
RARAP10276 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
RARAP10276 MIR4764-201ENST00000580680 88 ntBASIC2.54□□□□□ -2
RARAP10276 MIR3162-201ENST00000581818 82 ntBASIC2.54□□□□□ -2
RARAP10276 SNORD14A-201ENST00000606526 91 ntBASIC2.54□□□□□ -2
RARAP10276 MIR6817-201ENST00000615588 66 ntBASIC2.54□□□□□ -2
RARAP10276 SNORD38.1-201ENST00000363863 68 ntBASIC2.53□□□□□ -2
RARAP10276 Y_RNA.354-201ENST00000365448 111 ntBASIC2.53□□□□□ -2
RARAP10276 Y_RNA.355-201ENST00000365462 98 ntBASIC2.53□□□□□ -2
RARAP10276 SNORD58A-201ENST00000383875 65 ntBASIC2.53□□□□□ -2
RARAP10276 RNU6-979P-201ENST00000383896 107 ntBASIC2.53□□□□□ -2
RARAP10276 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.53□□□□□ -2
RARAP10276 RNU6-602P-201ENST00000411155 105 ntBASIC2.53□□□□□ -2
RARAP10276 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.53□□□□□ -2
RARAP10276 RNA5SP148-201ENST00000516527 94 ntBASIC2.53□□□□□ -2
RARAP10276 RNA5SP395-201ENST00000516567 118 ntBASIC2.53□□□□□ -2
RARAP10276 SNORA31.17-201ENST00000516953 127 ntBASIC2.53□□□□□ -2
RARAP10276 MIR5588-201ENST00000581890 63 ntBASIC2.53□□□□□ -2
RARAP10276 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.53□□□□□ -2
RARAP10276 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
RARAP10276 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
RARAP10276 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
RARAP10276 AL023284.1-201ENST00000403956 276 ntBASIC2.52□□□□□ -2.01
RARAP10276 MIR1255A-201ENST00000408338 113 ntBASIC2.52□□□□□ -2.01
RARAP10276 RNA5SP450-201ENST00000411206 102 ntBASIC2.52□□□□□ -2.01
RARAP10276 AL445685.2-201ENST00000422551 342 ntBASIC2.52□□□□□ -2.01
RARAP10276 RNA5SP458-201ENST00000516188 119 ntBASIC2.52□□□□□ -2.01
RARAP10276 SNORD67.1-201ENST00000516618 108 ntBASIC2.52□□□□□ -2.01
RARAP10276 DEFB122-202ENST00000569013 197 ntBASIC2.52□□□□□ -2.01
RARAP10276 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.52□□□□□ -2.01
RARAP10276 MIR4668-201ENST00000582284 70 ntBASIC2.52□□□□□ -2.01
RARAP10276 AC046143.2-201ENST00000609789 160 ntBASIC2.52□□□□□ -2.01
RARAP10276 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.52□□□□□ -2.01
RARAP10276 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RARAP10276 AC005336.3-201ENST00000623833 2679 ntBASIC2.51□□□□□ -2.01
RARAP10276 RNU6-1123P-201ENST00000362347 106 ntBASIC2.51□□□□□ -2.01
RARAP10276 RNU6-1163P-201ENST00000364516 107 ntBASIC2.51□□□□□ -2.01
RARAP10276 MIR34C-201ENST00000384831 77 ntBASIC2.51□□□□□ -2.01
RARAP10276 Y_RNA.620-201ENST00000411009 88 ntBASIC2.51□□□□□ -2.01
RARAP10276 RNU6-86P-201ENST00000606534 107 ntBASIC2.51□□□□□ -2.01
RARAP10276 AC103810.7-201ENST00000607821 91 ntBASIC2.51□□□□□ -2.01
RARAP10276 AC067747.1-201ENST00000608026 250 ntBASIC2.51□□□□□ -2.01
RARAP10276 SEPT14P17-201ENST00000617978 177 ntBASIC2.51□□□□□ -2.01
RARAP10276 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.5□□□□□ -2.01
RARAP10276 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RARAP10276 Y_RNA.448-201ENST00000384185 108 ntBASIC2.5□□□□□ -2.01
RARAP10276 RNU6-360P-201ENST00000390944 104 ntBASIC2.5□□□□□ -2.01
RARAP10276 RNU7-79P-201ENST00000516082 62 ntBASIC2.5□□□□□ -2.01
RARAP10276 AC015712.3-201ENST00000559380 164 ntBASIC2.5□□□□□ -2.01
RARAP10276 CYP3A52P-201ENST00000563326 91 ntBASIC2.5□□□□□ -2.01
RARAP10276 AC025521.1-201ENST00000621624 286 ntBASIC2.5□□□□□ -2.01
RARAP10276 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
RARAP10276 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
RARAP10276 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RARAP10276 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RARAP10276 RNU6-787P-201ENST00000384032 107 ntBASIC2.49□□□□□ -2.01
RARAP10276 MIR520C-201ENST00000385005 87 ntBASIC2.49□□□□□ -2.01
RARAP10276 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.49□□□□□ -2.01
RARAP10276 RNU6-1086P-201ENST00000410930 100 ntBASIC2.49□□□□□ -2.01
RARAP10276 RPS29P28-201ENST00000446439 141 ntBASIC2.49□□□□□ -2.01
RARAP10276 AC026436.1-201ENST00000510537 270 ntBASIC2.49□□□□□ -2.01
RARAP10276 SNORA31.25-201ENST00000517242 134 ntBASIC2.49□□□□□ -2.01
RARAP10276 MIR548AO-201ENST00000579992 96 ntBASIC2.49□□□□□ -2.01
RARAP10276 AC016717.2-201ENST00000609089 5141 ntBASIC2.49□□□□□ -2.01
RARAP10276 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RARAP10276 RNU6-203P-201ENST00000384038 104 ntBASIC2.48□□□□□ -2.01
RARAP10276 RNY1P4-201ENST00000384595 115 ntBASIC2.48□□□□□ -2.01
RARAP10276 RNU7-171P-201ENST00000459581 62 ntBASIC2.48□□□□□ -2.01
RARAP10276 RNU7-137P-201ENST00000516788 62 ntBASIC2.48□□□□□ -2.01
RARAP10276 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.48□□□□□ -2.01
RARAP10276 MIR1291-201ENST00000627649 87 ntBASIC2.48□□□□□ -2.01
RARAP10276 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.48□□□□□ -2.01
RARAP10276 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
RARAP10276 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.47□□□□□ -2.01
RARAP10276 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms