Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.76□□□□□ -2.53
HLA-DQB2P05538 AL590491.3-201ENST00000610731 82 ntBASIC-0.76□□□□□ -2.53
HLA-DQB2P05538 MIR6507-201ENST00000613630 70 ntBASIC-0.76□□□□□ -2.53
HLA-DQB2P05538 MIR3688-2-201ENST00000636963 87 ntBASIC-0.76□□□□□ -2.53
HLA-DQB2P05538 SNORA22.1-201ENST00000362701 134 ntBASIC-0.77□□□□□ -2.53
HLA-DQB2P05538 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.77□□□□□ -2.53
HLA-DQB2P05538 RNA5SP205-201ENST00000364653 136 ntBASIC-0.77□□□□□ -2.53
HLA-DQB2P05538 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.77□□□□□ -2.53
HLA-DQB2P05538 MTND1P34-201ENST00000438556 671 ntBASIC-0.77□□□□□ -2.53
HLA-DQB2P05538 MIR5589-201ENST00000579442 60 ntBASIC-0.77□□□□□ -2.53
HLA-DQB2P05538 MIR4493-201ENST00000584016 73 ntBASIC-0.77□□□□□ -2.53
HLA-DQB2P05538 AL356055.1-201ENST00000602528 446 ntBASIC-0.77□□□□□ -2.53
HLA-DQB2P05538 AC091932.4-201ENST00000623386 200 ntBASIC-0.77□□□□□ -2.53
HLA-DQB2P05538 U6.109-201ENST00000636749 87 ntBASIC-0.77□□□□□ -2.53
HLA-DQB2P05538 MIR376A2-201ENST00000636782 80 ntBASIC-0.77□□□□□ -2.53
HLA-DQB2P05538 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.78□□□□□ -2.53
HLA-DQB2P05538 RNU6-490P-201ENST00000362985 107 ntBASIC-0.78□□□□□ -2.53
HLA-DQB2P05538 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.78□□□□□ -2.53
HLA-DQB2P05538 U8.6-201ENST00000364939 135 ntBASIC-0.78□□□□□ -2.53
HLA-DQB2P05538 MIR559-201ENST00000385188 96 ntBASIC-0.78□□□□□ -2.53
HLA-DQB2P05538 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.78□□□□□ -2.53
HLA-DQB2P05538 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.78□□□□□ -2.53
HLA-DQB2P05538 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.78□□□□□ -2.53
HLA-DQB2P05538 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.78□□□□□ -2.53
HLA-DQB2P05538 RNU6-764P-201ENST00000516396 105 ntBASIC-0.78□□□□□ -2.53
HLA-DQB2P05538 AL121655.1-201ENST00000605811 308 ntBASIC-0.78□□□□□ -2.53
HLA-DQB2P05538 MIR4272-201ENST00000635924 64 ntBASIC-0.78□□□□□ -2.53
HLA-DQB2P05538 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.79□□□□□ -2.54
HLA-DQB2P05538 RNA5SP451-201ENST00000410588 110 ntBASIC-0.79□□□□□ -2.54
HLA-DQB2P05538 RNA5SP484-201ENST00000458857 111 ntBASIC-0.79□□□□□ -2.54
HLA-DQB2P05538 MRPS35P2-201ENST00000508242 191 ntBASIC-0.79□□□□□ -2.54
HLA-DQB2P05538 SNORA25.13-201ENST00000516395 103 ntBASIC-0.79□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.79□□□□□ -2.54
HLA-DQB2P05538 RNU7-30P-201ENST00000516835 62 ntBASIC-0.79□□□□□ -2.54
HLA-DQB2P05538 MIR4432-201ENST00000581823 84 ntBASIC-0.79□□□□□ -2.54
HLA-DQB2P05538 MIR5690-201ENST00000583739 73 ntBASIC-0.79□□□□□ -2.54
HLA-DQB2P05538 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.79□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.8□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.8□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.8□□□□□ -2.54
HLA-DQB2P05538 RNU7-80P-201ENST00000459562 61 ntBASIC-0.8□□□□□ -2.54
HLA-DQB2P05538 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.8□□□□□ -2.54
HLA-DQB2P05538 SNORD113-5-201ENST00000607261 78 ntBASIC-0.8□□□□□ -2.54
HLA-DQB2P05538 RN7SL660P-201ENST00000614852 299 ntBASIC-0.8□□□□□ -2.54
HLA-DQB2P05538 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.8□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.81□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.81□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.81□□□□□ -2.54
HLA-DQB2P05538 RPS29P8-201ENST00000445109 171 ntBASIC-0.81□□□□□ -2.54
HLA-DQB2P05538 SEPT14P8-201ENST00000508026 178 ntBASIC-0.81□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.81□□□□□ -2.54
HLA-DQB2P05538 RNU6-699P-201ENST00000517081 110 ntBASIC-0.81□□□□□ -2.54
HLA-DQB2P05538 AC024909.2-201ENST00000553035 286 ntBASIC-0.81□□□□□ -2.54
HLA-DQB2P05538 MIR5692C2-201ENST00000577959 77 ntBASIC-0.81□□□□□ -2.54
HLA-DQB2P05538 C8orf59P2-201ENST00000603441 271 ntBASIC-0.81□□□□□ -2.54
HLA-DQB2P05538 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.81□□□□□ -2.54
HLA-DQB2P05538 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.81□□□□□ -2.54
HLA-DQB2P05538 MTND5P32-201ENST00000560711 1802 ntBASIC-0.81□□□□□ -2.54
HLA-DQB2P05538 RNU4-84P-201ENST00000364200 139 ntBASIC-0.82□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.82□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.82□□□□□ -2.54
HLA-DQB2P05538 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.82□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.82□□□□□ -2.54
HLA-DQB2P05538 RNU7-79P-201ENST00000516082 62 ntBASIC-0.82□□□□□ -2.54
HLA-DQB2P05538 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.82□□□□□ -2.54
HLA-DQB2P05538 AC021613.1-201ENST00000623880 111 ntBASIC-0.82□□□□□ -2.54
HLA-DQB2P05538 AL391099.1-201ENST00000624635 187 ntBASIC-0.82□□□□□ -2.54
HLA-DQB2P05538 RNU6-509P-201ENST00000363519 107 ntBASIC-0.83□□□□□ -2.54
HLA-DQB2P05538 SNORA25.7-201ENST00000364375 127 ntBASIC-0.83□□□□□ -2.54
HLA-DQB2P05538 RNU4-10P-201ENST00000364383 140 ntBASIC-0.83□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.83□□□□□ -2.54
HLA-DQB2P05538 MIR526A2-201ENST00000390198 65 ntBASIC-0.83□□□□□ -2.54
HLA-DQB2P05538 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.83□□□□□ -2.54
HLA-DQB2P05538 MIR4636-201ENST00000582271 80 ntBASIC-0.83□□□□□ -2.54
HLA-DQB2P05538 MIR5197-201ENST00000583721 112 ntBASIC-0.83□□□□□ -2.54
HLA-DQB2P05538 RPS29P30-201ENST00000600975 111 ntBASIC-0.83□□□□□ -2.54
HLA-DQB2P05538 AC097639.2-201ENST00000603159 172 ntBASIC-0.83□□□□□ -2.54
HLA-DQB2P05538 AC096720.1-201ENST00000604441 183 ntBASIC-0.83□□□□□ -2.54
HLA-DQB2P05538 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.83□□□□□ -2.54
HLA-DQB2P05538 U4.5-201ENST00000617137 123 ntBASIC-0.83□□□□□ -2.54
HLA-DQB2P05538 AC022079.1-201ENST00000621546 602 ntBASIC-0.83□□□□□ -2.54
HLA-DQB2P05538 RNA5SP98-201ENST00000363158 137 ntBASIC-0.84□□□□□ -2.54
HLA-DQB2P05538 RNU6-865P-201ENST00000364772 107 ntBASIC-0.84□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.84□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.84□□□□□ -2.54
HLA-DQB2P05538 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.84□□□□□ -2.54
HLA-DQB2P05538 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.84□□□□□ -2.54
HLA-DQB2P05538 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.84□□□□□ -2.54
HLA-DQB2P05538 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.84□□□□□ -2.54
HLA-DQB2P05538 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.84□□□□□ -2.54
HLA-DQB2P05538 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.85□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.85□□□□□ -2.55
HLA-DQB2P05538 RNU6-484P-201ENST00000384016 107 ntBASIC-0.85□□□□□ -2.55
HLA-DQB2P05538 RNU2-55P-201ENST00000411146 174 ntBASIC-0.85□□□□□ -2.55
HLA-DQB2P05538 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.85□□□□□ -2.55
HLA-DQB2P05538 RNU6-507P-201ENST00000516045 100 ntBASIC-0.85□□□□□ -2.55
HLA-DQB2P05538 MIR5688-201ENST00000580619 83 ntBASIC-0.85□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.86□□□□□ -2.55
HLA-DQB2P05538 RNU4-16P-201ENST00000364737 141 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms