Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC009474.2-201ENST00000451383 136 ntBASIC1.85□□□□□ -2.11
COL3A1P02461 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.85□□□□□ -2.11
COL3A1P02461 AC022523.2-201ENST00000561045 150 ntBASIC1.85□□□□□ -2.11
COL3A1P02461 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
COL3A1P02461 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
COL3A1P02461 RNU6-1099P-201ENST00000363533 107 ntBASIC1.84□□□□□ -2.11
COL3A1P02461 Y_RNA.299-201ENST00000364973 94 ntBASIC1.84□□□□□ -2.11
COL3A1P02461 RNU6-1134P-201ENST00000365156 101 ntBASIC1.84□□□□□ -2.11
COL3A1P02461 SNORD114-22-201ENST00000365423 72 ntBASIC1.84□□□□□ -2.11
COL3A1P02461 RNU6-893P-201ENST00000458841 100 ntBASIC1.84□□□□□ -2.11
COL3A1P02461 RN7SKP12-201ENST00000516275 143 ntBASIC1.84□□□□□ -2.11
COL3A1P02461 Y_RNA.685-201ENST00000516532 108 ntBASIC1.84□□□□□ -2.11
COL3A1P02461 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.84□□□□□ -2.11
COL3A1P02461 HSPE1P19-201ENST00000603327 295 ntBASIC1.84□□□□□ -2.11
COL3A1P02461 AC027279.3-201ENST00000625055 122 ntBASIC1.84□□□□□ -2.11
COL3A1P02461 Y_RNA.241-201ENST00000364470 117 ntBASIC1.83□□□□□ -2.12
COL3A1P02461 SNORA4.2-201ENST00000365313 147 ntBASIC1.83□□□□□ -2.12
COL3A1P02461 Y_RNA.531-201ENST00000384589 121 ntBASIC1.83□□□□□ -2.12
COL3A1P02461 MIR1262-201ENST00000408276 93 ntBASIC1.83□□□□□ -2.12
COL3A1P02461 AC114811.1-201ENST00000507207 168 ntBASIC1.83□□□□□ -2.12
COL3A1P02461 AC004812.1-201ENST00000540773 146 ntBASIC1.83□□□□□ -2.12
COL3A1P02461 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
COL3A1P02461 MIR96-201ENST00000362288 78 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 RNU6-363P-201ENST00000362895 105 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 Y_RNA.155-201ENST00000363632 101 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 Y_RNA.342-201ENST00000365352 113 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 RNU6-409P-201ENST00000384114 104 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 RNU6-1152P-201ENST00000384576 107 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 RNU6-1275P-201ENST00000391087 107 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 RNU7-96P-201ENST00000459535 64 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 AC026271.5-201ENST00000577873 130 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 MIR3152-201ENST00000579801 74 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 U4atac.1-201ENST00000618345 95 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 AC087741.2-201ENST00000619415 172 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 MIR8054-201ENST00000620877 86 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 ZNF209P-201ENST00000593450 2304 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 RNU6-23P-201ENST00000363283 107 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 RNU4-16P-201ENST00000364737 141 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 SNORA67.1-201ENST00000364749 141 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 RNU6-733P-201ENST00000410759 104 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 RNA5SP144-201ENST00000410846 116 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 AC015922.2-201ENST00000435593 184 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 RNU6-998P-201ENST00000515894 101 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 MIR3169-201ENST00000578032 83 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 MIR1245B-201ENST00000636115 69 ntBASIC1.82□□□□□ -2.12
COL3A1P02461 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL3A1P02461 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-34-201ENST00000362441 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-12-201ENST00000362583 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-29-201ENST00000362834 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-9-201ENST00000362912 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-21-201ENST00000362963 81 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-14-201ENST00000363090 81 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-13-201ENST00000363358 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-41-201ENST00000363608 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-11-201ENST00000363616 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-5-201ENST00000363633 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-39-201ENST00000363694 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-4-201ENST00000363810 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-16-201ENST00000363887 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-6-201ENST00000363942 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-42-201ENST00000364273 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-15-201ENST00000364809 81 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-1-201ENST00000364961 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-26-201ENST00000365067 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-10-201ENST00000365073 81 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-43-201ENST00000365503 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 SNORD115-36-201ENST00000365629 82 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 RNA5SP109-201ENST00000391010 116 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 MIR1267-201ENST00000408723 78 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 AL512326.2-201ENST00000426359 151 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 AL606517.2-201ENST00000442855 241 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 RPS23P4-201ENST00000487908 423 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 AC113410.1-201ENST00000505029 247 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 RNU6-638P-201ENST00000516582 104 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 RPPH1-2P-201ENST00000516688 293 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 AC021613.1-201ENST00000623880 111 ntBASIC1.81□□□□□ -2.12
COL3A1P02461 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.8□□□□□ -2.12
COL3A1P02461 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
COL3A1P02461 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
COL3A1P02461 Y_RNA.96-201ENST00000363092 109 ntBASIC1.8□□□□□ -2.12
COL3A1P02461 SNORD115-19-201ENST00000363098 82 ntBASIC1.8□□□□□ -2.12
COL3A1P02461 SNORD115-18-201ENST00000363293 82 ntBASIC1.8□□□□□ -2.12
COL3A1P02461 RNU6-1019P-201ENST00000364424 107 ntBASIC1.8□□□□□ -2.12
COL3A1P02461 SNORD115-17-201ENST00000364612 82 ntBASIC1.8□□□□□ -2.12
COL3A1P02461 RNU1-93P-201ENST00000364704 169 ntBASIC1.8□□□□□ -2.12
COL3A1P02461 SNORA1.2-201ENST00000365189 134 ntBASIC1.8□□□□□ -2.12
COL3A1P02461 SNORA18-201ENST00000384416 132 ntBASIC1.8□□□□□ -2.12
COL3A1P02461 STAG3L5P-204ENST00000443759 179 ntBASIC1.8□□□□□ -2.12
COL3A1P02461 AC109327.2-201ENST00000448339 378 ntBASIC1.8□□□□□ -2.12
COL3A1P02461 RNU2-11P-201ENST00000459191 187 ntBASIC1.8□□□□□ -2.12
COL3A1P02461 MIR4694-201ENST00000578534 80 ntBASIC1.8□□□□□ -2.12
COL3A1P02461 AC005786.1-201ENST00000588553 154 ntBASIC1.8□□□□□ -2.12
COL3A1P02461 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.8□□□□□ -2.12
COL3A1P02461 MIR6840-201ENST00000611937 71 ntBASIC1.8□□□□□ -2.12
COL3A1P02461 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms