Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 MIR377-201ENST00000362145 69 ntBASIC0.84□□□□□ -2.27
DDX58O95786 Y_RNA.478-201ENST00000384358 107 ntBASIC0.84□□□□□ -2.27
DDX58O95786 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
DDX58O95786 MIR548I3-201ENST00000408378 149 ntBASIC0.84□□□□□ -2.27
DDX58O95786 RPS26P5-201ENST00000418544 335 ntBASIC0.84□□□□□ -2.27
DDX58O95786 MTND3P2-201ENST00000438452 342 ntBASIC0.84□□□□□ -2.27
DDX58O95786 snoU13.21-201ENST00000459368 105 ntBASIC0.84□□□□□ -2.27
DDX58O95786 Y_RNA.668-201ENST00000516233 93 ntBASIC0.84□□□□□ -2.27
DDX58O95786 AC004812.1-201ENST00000540773 146 ntBASIC0.84□□□□□ -2.27
DDX58O95786 MIR8055-201ENST00000610739 97 ntBASIC0.84□□□□□ -2.27
DDX58O95786 RNU6-110P-201ENST00000384508 104 ntBASIC0.83□□□□□ -2.28
DDX58O95786 SNORD105-201ENST00000386910 85 ntBASIC0.83□□□□□ -2.28
DDX58O95786 MIR1827-201ENST00000408549 66 ntBASIC0.83□□□□□ -2.28
DDX58O95786 Y_RNA.618-201ENST00000410949 107 ntBASIC0.83□□□□□ -2.28
DDX58O95786 AL606490.4-201ENST00000423117 127 ntBASIC0.83□□□□□ -2.28
DDX58O95786 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.83□□□□□ -2.28
DDX58O95786 RNU6-977P-201ENST00000516411 103 ntBASIC0.83□□□□□ -2.28
DDX58O95786 MIR4771-2-201ENST00000577758 74 ntBASIC0.83□□□□□ -2.28
DDX58O95786 MIR4771-1-201ENST00000582617 74 ntBASIC0.83□□□□□ -2.28
DDX58O95786 Z97988.1-201ENST00000637697 135 ntBASIC0.83□□□□□ -2.28
DDX58O95786 HSBP1P2-201ENST00000299671 229 ntBASIC0.82□□□□□ -2.28
DDX58O95786 Y_RNA.20-201ENST00000362479 113 ntBASIC0.82□□□□□ -2.28
DDX58O95786 SNORA20.1-201ENST00000364790 130 ntBASIC0.82□□□□□ -2.28
DDX58O95786 RNU6-580P-201ENST00000365159 107 ntBASIC0.82□□□□□ -2.28
DDX58O95786 Y_RNA.542-201ENST00000384641 111 ntBASIC0.82□□□□□ -2.28
DDX58O95786 RNU6-578P-201ENST00000390980 103 ntBASIC0.82□□□□□ -2.28
DDX58O95786 Y_RNA.626-201ENST00000411288 95 ntBASIC0.82□□□□□ -2.28
DDX58O95786 AC015818.7-201ENST00000428754 109 ntBASIC0.82□□□□□ -2.28
DDX58O95786 MTND5P15-201ENST00000434246 349 ntBASIC0.82□□□□□ -2.28
DDX58O95786 SEPT7P4-201ENST00000437076 306 ntBASIC0.82□□□□□ -2.28
DDX58O95786 AC087499.7-201ENST00000441958 109 ntBASIC0.82□□□□□ -2.28
DDX58O95786 MTND1P19-201ENST00000511780 315 ntBASIC0.82□□□□□ -2.28
DDX58O95786 RNU7-70P-201ENST00000516941 66 ntBASIC0.82□□□□□ -2.28
DDX58O95786 AC011195.1-201ENST00000578177 177 ntBASIC0.82□□□□□ -2.28
DDX58O95786 AL353621.2-201ENST00000605340 133 ntBASIC0.82□□□□□ -2.28
DDX58O95786 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.82□□□□□ -2.28
DDX58O95786 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
DDX58O95786 Y_RNA.182-201ENST00000363880 111 ntBASIC0.81□□□□□ -2.28
DDX58O95786 RNU6-702P-201ENST00000364982 107 ntBASIC0.81□□□□□ -2.28
DDX58O95786 Y_RNA.539-201ENST00000384635 107 ntBASIC0.81□□□□□ -2.28
DDX58O95786 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.81□□□□□ -2.28
DDX58O95786 RNU6-1190P-201ENST00000410811 104 ntBASIC0.81□□□□□ -2.28
DDX58O95786 AC006461.1-201ENST00000412637 326 ntBASIC0.81□□□□□ -2.28
DDX58O95786 RNU7-80P-201ENST00000459562 61 ntBASIC0.81□□□□□ -2.28
DDX58O95786 SNORD116-25-201ENST00000516517 92 ntBASIC0.81□□□□□ -2.28
DDX58O95786 MIR4503-201ENST00000582187 83 ntBASIC0.81□□□□□ -2.28
DDX58O95786 MIR6513-201ENST00000621188 64 ntBASIC0.81□□□□□ -2.28
DDX58O95786 AC099654.10-201ENST00000640395 161 ntBASIC0.81□□□□□ -2.28
DDX58O95786 RNU4-70P-201ENST00000384579 139 ntBASIC0.8□□□□□ -2.28
DDX58O95786 MIR588-201ENST00000384900 83 ntBASIC0.8□□□□□ -2.28
DDX58O95786 RNU4-43P-201ENST00000410628 137 ntBASIC0.8□□□□□ -2.28
DDX58O95786 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.8□□□□□ -2.28
DDX58O95786 MIR378D2-201ENST00000580636 98 ntBASIC0.8□□□□□ -2.28
DDX58O95786 AL596211.1-201ENST00000569873 2277 ntBASIC0.8□□□□□ -2.28
DDX58O95786 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
DDX58O95786 Y_RNA.454-201ENST00000384224 113 ntBASIC0.79□□□□□ -2.28
DDX58O95786 RNU6-574P-201ENST00000384265 107 ntBASIC0.79□□□□□ -2.28
DDX58O95786 MIR520F-201ENST00000384824 87 ntBASIC0.79□□□□□ -2.28
DDX58O95786 RNU6-602P-201ENST00000411155 105 ntBASIC0.79□□□□□ -2.28
DDX58O95786 RNU7-45P-201ENST00000459460 63 ntBASIC0.79□□□□□ -2.28
DDX58O95786 RNU4-71P-201ENST00000516258 113 ntBASIC0.79□□□□□ -2.28
DDX58O95786 AC010332.2-201ENST00000613083 1904 ntBASIC0.79□□□□□ -2.28
DDX58O95786 Y_RNA.60-201ENST00000362831 98 ntBASIC0.78□□□□□ -2.28
DDX58O95786 Y_RNA.121-201ENST00000363309 113 ntBASIC0.78□□□□□ -2.28
DDX58O95786 RNU6-1292P-201ENST00000383856 107 ntBASIC0.78□□□□□ -2.28
DDX58O95786 Y_RNA.571-201ENST00000384753 98 ntBASIC0.78□□□□□ -2.28
DDX58O95786 RNU1-119P-201ENST00000391122 165 ntBASIC0.78□□□□□ -2.28
DDX58O95786 RNA5SP261-201ENST00000410536 106 ntBASIC0.78□□□□□ -2.28
DDX58O95786 RNA5SP222-201ENST00000411039 105 ntBASIC0.78□□□□□ -2.28
DDX58O95786 MIR5197-201ENST00000583721 112 ntBASIC0.78□□□□□ -2.28
DDX58O95786 MIR376A2-201ENST00000636782 80 ntBASIC0.78□□□□□ -2.28
DDX58O95786 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
DDX58O95786 Y_RNA.447-201ENST00000384184 113 ntBASIC0.77□□□□□ -2.29
DDX58O95786 SNORD12C-201ENST00000386307 89 ntBASIC0.77□□□□□ -2.29
DDX58O95786 AL078595.1-201ENST00000404458 226 ntBASIC0.77□□□□□ -2.29
DDX58O95786 Y_RNA.680-201ENST00000516441 93 ntBASIC0.77□□□□□ -2.29
DDX58O95786 RNU6-111P-201ENST00000517179 105 ntBASIC0.77□□□□□ -2.29
DDX58O95786 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.77□□□□□ -2.29
DDX58O95786 MIR4308-201ENST00000580634 81 ntBASIC0.77□□□□□ -2.29
DDX58O95786 MIR3149-201ENST00000584629 83 ntBASIC0.77□□□□□ -2.29
DDX58O95786 MIR6740-201ENST00000618268 113 ntBASIC0.77□□□□□ -2.29
DDX58O95786 Y_RNA.193-201ENST00000363979 102 ntBASIC0.76□□□□□ -2.29
DDX58O95786 Y_RNA.307-201ENST00000365022 117 ntBASIC0.76□□□□□ -2.29
DDX58O95786 MIR520H-201ENST00000385126 88 ntBASIC0.76□□□□□ -2.29
DDX58O95786 COX6CP6-201ENST00000490840 228 ntBASIC0.76□□□□□ -2.29
DDX58O95786 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.76□□□□□ -2.29
DDX58O95786 RNU6-1023P-201ENST00000516137 106 ntBASIC0.76□□□□□ -2.29
DDX58O95786 MIR3152-201ENST00000579801 74 ntBASIC0.76□□□□□ -2.29
DDX58O95786 AL365205.2-201ENST00000594586 68 ntBASIC0.76□□□□□ -2.29
DDX58O95786 Z83818.1-201ENST00000603584 150 ntBASIC0.76□□□□□ -2.29
DDX58O95786 MIR6717-201ENST00000622747 73 ntBASIC0.76□□□□□ -2.29
DDX58O95786 SNORA36.2-201ENST00000384004 127 ntBASIC0.75□□□□□ -2.29
DDX58O95786 Y_RNA.452-201ENST00000384202 108 ntBASIC0.75□□□□□ -2.29
DDX58O95786 MIR936-201ENST00000401264 98 ntBASIC0.75□□□□□ -2.29
DDX58O95786 RNU6-1165P-201ENST00000410119 107 ntBASIC0.75□□□□□ -2.29
DDX58O95786 MIR18B-201ENST00000454574 71 ntBASIC0.75□□□□□ -2.29
DDX58O95786 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.75□□□□□ -2.29
DDX58O95786 snoU13.2-201ENST00000459201 104 ntBASIC0.75□□□□□ -2.29
DDX58O95786 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
DDX58O95786 MIR4676-201ENST00000583078 72 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 332 ms