Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.69□□□□□ -2.3
MBD4O95243 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.69□□□□□ -2.3
MBD4O95243 AC010332.2-201ENST00000613083 1904 ntBASIC0.68□□□□□ -2.3
MBD4O95243 Y_RNA.23-201ENST00000362496 106 ntBASIC0.68□□□□□ -2.3
MBD4O95243 RNU4-43P-201ENST00000410628 137 ntBASIC0.68□□□□□ -2.3
MBD4O95243 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.68□□□□□ -2.3
MBD4O95243 RNU7-80P-201ENST00000459562 61 ntBASIC0.68□□□□□ -2.3
MBD4O95243 RNY3P16-201ENST00000516338 101 ntBASIC0.68□□□□□ -2.3
MBD4O95243 Z83818.1-201ENST00000603584 150 ntBASIC0.68□□□□□ -2.3
MBD4O95243 MIR342-201ENST00000362212 99 ntBASIC0.67□□□□□ -2.3
MBD4O95243 Y_RNA.351-201ENST00000365436 96 ntBASIC0.67□□□□□ -2.3
MBD4O95243 SNORA36.2-201ENST00000384004 127 ntBASIC0.67□□□□□ -2.3
MBD4O95243 SNORA1-201ENST00000384107 130 ntBASIC0.67□□□□□ -2.3
MBD4O95243 Y_RNA.454-201ENST00000384224 113 ntBASIC0.67□□□□□ -2.3
MBD4O95243 Y_RNA.562-201ENST00000384695 113 ntBASIC0.67□□□□□ -2.3
MBD4O95243 RNU6-177P-201ENST00000411257 104 ntBASIC0.67□□□□□ -2.3
MBD4O95243 AC098934.3-201ENST00000430450 190 ntBASIC0.67□□□□□ -2.3
MBD4O95243 MTND1P19-201ENST00000511780 315 ntBASIC0.67□□□□□ -2.3
MBD4O95243 RNU6-1045P-201ENST00000516321 107 ntBASIC0.67□□□□□ -2.3
MBD4O95243 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
MBD4O95243 MIR5197-201ENST00000583721 112 ntBASIC0.67□□□□□ -2.3
MBD4O95243 MIR6513-201ENST00000621188 64 ntBASIC0.67□□□□□ -2.3
MBD4O95243 SNORD27-201ENST00000363981 72 ntBASIC0.66□□□□□ -2.3
MBD4O95243 RNU6-1292P-201ENST00000383856 107 ntBASIC0.66□□□□□ -2.3
MBD4O95243 Y_RNA.477-201ENST00000384352 108 ntBASIC0.66□□□□□ -2.3
MBD4O95243 MT-TF-201ENST00000387314 71 ntBASIC0.66□□□□□ -2.3
MBD4O95243 MIR938-201ENST00000401216 83 ntBASIC0.66□□□□□ -2.3
MBD4O95243 RNU6-1190P-201ENST00000410811 104 ntBASIC0.66□□□□□ -2.3
MBD4O95243 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.66□□□□□ -2.3
MBD4O95243 AC015818.7-201ENST00000428754 109 ntBASIC0.66□□□□□ -2.3
MBD4O95243 AC087499.7-201ENST00000441958 109 ntBASIC0.66□□□□□ -2.3
MBD4O95243 Y_RNA.668-201ENST00000516233 93 ntBASIC0.66□□□□□ -2.3
MBD4O95243 MIR3129-201ENST00000581095 76 ntBASIC0.66□□□□□ -2.3
MBD4O95243 AC020891.4-201ENST00000605745 93 ntBASIC0.66□□□□□ -2.3
MBD4O95243 RNY4P28-201ENST00000365281 93 ntBASIC0.65□□□□□ -2.31
MBD4O95243 Y_RNA.539-201ENST00000384635 107 ntBASIC0.65□□□□□ -2.31
MBD4O95243 MIR563-201ENST00000385080 79 ntBASIC0.65□□□□□ -2.31
MBD4O95243 MIR92A1-201ENST00000385233 78 ntBASIC0.65□□□□□ -2.31
MBD4O95243 MIR1257-201ENST00000408490 117 ntBASIC0.65□□□□□ -2.31
MBD4O95243 Y_RNA.618-201ENST00000410949 107 ntBASIC0.65□□□□□ -2.31
MBD4O95243 AC004817.2-201ENST00000561794 651 ntBASIC0.65□□□□□ -2.31
MBD4O95243 AL365205.2-201ENST00000594586 68 ntBASIC0.65□□□□□ -2.31
MBD4O95243 uc_338.6-201ENST00000613544 171 ntBASIC0.65□□□□□ -2.31
MBD4O95243 PVT1_3.1-201ENST00000620853 95 ntBASIC0.65□□□□□ -2.31
MBD4O95243 MIR376A2-201ENST00000636782 80 ntBASIC0.65□□□□□ -2.31
MBD4O95243 RNA5SP347-201ENST00000362445 119 ntBASIC0.64□□□□□ -2.31
MBD4O95243 Y_RNA.65-201ENST00000362846 100 ntBASIC0.64□□□□□ -2.31
MBD4O95243 Y_RNA.308-201ENST00000365043 101 ntBASIC0.64□□□□□ -2.31
MBD4O95243 RNU6-945P-201ENST00000383947 107 ntBASIC0.64□□□□□ -2.31
MBD4O95243 Y_RNA.556-201ENST00000384677 113 ntBASIC0.64□□□□□ -2.31
MBD4O95243 MIR140-201ENST00000385282 100 ntBASIC0.64□□□□□ -2.31
MBD4O95243 RNU6-493P-201ENST00000391321 108 ntBASIC0.64□□□□□ -2.31
MBD4O95243 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.64□□□□□ -2.31
MBD4O95243 AL118496.2-201ENST00000448300 230 ntBASIC0.64□□□□□ -2.31
MBD4O95243 RNU7-56P-201ENST00000458744 62 ntBASIC0.64□□□□□ -2.31
MBD4O95243 MIR4744-201ENST00000581563 82 ntBASIC0.64□□□□□ -2.31
MBD4O95243 MIR4719-201ENST00000585233 84 ntBASIC0.64□□□□□ -2.31
MBD4O95243 MIR6717-201ENST00000622747 73 ntBASIC0.64□□□□□ -2.31
MBD4O95243 AC099654.10-201ENST00000640395 161 ntBASIC0.64□□□□□ -2.31
MBD4O95243 MIR598-201ENST00000384868 97 ntBASIC0.63□□□□□ -2.31
MBD4O95243 MIR1302-3-201ENST00000408128 138 ntBASIC0.63□□□□□ -2.31
MBD4O95243 AC092628.1-201ENST00000436250 252 ntBASIC0.63□□□□□ -2.31
MBD4O95243 Y_RNA.680-201ENST00000516441 93 ntBASIC0.63□□□□□ -2.31
MBD4O95243 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.63□□□□□ -2.31
MBD4O95243 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
MBD4O95243 RNU6-923P-201ENST00000364753 107 ntBASIC0.62□□□□□ -2.31
MBD4O95243 RNU6-364P-201ENST00000384387 107 ntBASIC0.62□□□□□ -2.31
MBD4O95243 RNU6-1237P-201ENST00000384777 107 ntBASIC0.62□□□□□ -2.31
MBD4O95243 MIR125B2-201ENST00000385128 89 ntBASIC0.62□□□□□ -2.31
MBD4O95243 SNORD12C-201ENST00000386307 89 ntBASIC0.62□□□□□ -2.31
MBD4O95243 SNORA26.6-201ENST00000391256 115 ntBASIC0.62□□□□□ -2.31
MBD4O95243 SNORD58.1-201ENST00000391313 66 ntBASIC0.62□□□□□ -2.31
MBD4O95243 RNU7-185P-201ENST00000459215 60 ntBASIC0.62□□□□□ -2.31
MBD4O95243 RNU6-229P-201ENST00000516614 102 ntBASIC0.62□□□□□ -2.31
MBD4O95243 MIR3612-201ENST00000579753 87 ntBASIC0.62□□□□□ -2.31
MBD4O95243 MIR3128-201ENST00000581957 66 ntBASIC0.62□□□□□ -2.31
MBD4O95243 RNU2-4P-201ENST00000606190 192 ntBASIC0.62□□□□□ -2.31
MBD4O95243 Y_RNA.20-201ENST00000362479 113 ntBASIC0.61□□□□□ -2.31
MBD4O95243 Y_RNA.350-201ENST00000365409 98 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RNU6-1319P-201ENST00000390855 104 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RNU6-747P-201ENST00000390928 104 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RNU6-241P-201ENST00000391148 104 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RNU6-447P-201ENST00000410293 104 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RNU6-1118P-201ENST00000410382 104 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RNU6-1076P-201ENST00000410397 104 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RNU6-355P-201ENST00000410427 104 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RNU6-791P-201ENST00000410467 104 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RNU6-705P-201ENST00000410601 104 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RNU6-1100P-201ENST00000410691 104 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RNU6-860P-201ENST00000410860 104 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RNU6-1217P-201ENST00000411276 104 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RNU6-785P-201ENST00000411324 104 ntBASIC0.61□□□□□ -2.31
MBD4O95243 MTND3P2-201ENST00000438452 342 ntBASIC0.61□□□□□ -2.31
MBD4O95243 AL121914.1-201ENST00000450188 156 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RNU7-45P-201ENST00000459460 63 ntBASIC0.61□□□□□ -2.31
MBD4O95243 RN7SKP12-201ENST00000516275 143 ntBASIC0.61□□□□□ -2.31
MBD4O95243 SNORD116-25-201ENST00000516517 92 ntBASIC0.61□□□□□ -2.31
MBD4O95243 MIR3152-201ENST00000579801 74 ntBASIC0.61□□□□□ -2.31
MBD4O95243 MIR4503-201ENST00000582187 83 ntBASIC0.61□□□□□ -2.31
MBD4O95243 AC062037.2-201ENST00000610137 73 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms