Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 snosnR66.1-201ENST00000391095 99 ntBASIC0.73□□□□□ -2.29
RTCAO00442 RNA5SP95-201ENST00000410319 137 ntBASIC0.73□□□□□ -2.29
RTCAO00442 RNA5SP127-201ENST00000411051 133 ntBASIC0.73□□□□□ -2.29
RTCAO00442 RNU6-602P-201ENST00000411155 105 ntBASIC0.73□□□□□ -2.29
RTCAO00442 MIR4431-201ENST00000579990 94 ntBASIC0.73□□□□□ -2.29
RTCAO00442 RNU6-369P-201ENST00000362515 102 ntBASIC0.72□□□□□ -2.29
RTCAO00442 RNU6-312P-201ENST00000364629 107 ntBASIC0.72□□□□□ -2.29
RTCAO00442 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.72□□□□□ -2.29
RTCAO00442 RPS26P5-201ENST00000418544 335 ntBASIC0.72□□□□□ -2.29
RTCAO00442 SCARNA15-202ENST00000516881 127 ntBASIC0.72□□□□□ -2.29
RTCAO00442 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.72□□□□□ -2.29
RTCAO00442 MIR6717-201ENST00000622747 73 ntBASIC0.72□□□□□ -2.29
RTCAO00442 U6.106-201ENST00000636360 105 ntBASIC0.72□□□□□ -2.29
RTCAO00442 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
RTCAO00442 Y_RNA.351-201ENST00000365436 96 ntBASIC0.71□□□□□ -2.3
RTCAO00442 Y_RNA.354-201ENST00000365448 111 ntBASIC0.71□□□□□ -2.3
RTCAO00442 RNU6-1319P-201ENST00000390855 104 ntBASIC0.71□□□□□ -2.3
RTCAO00442 RNU6-747P-201ENST00000390928 104 ntBASIC0.71□□□□□ -2.3
RTCAO00442 RNU6-241P-201ENST00000391148 104 ntBASIC0.71□□□□□ -2.3
RTCAO00442 RNU6-994P-201ENST00000410507 111 ntBASIC0.71□□□□□ -2.3
RTCAO00442 RNU6-177P-201ENST00000411257 104 ntBASIC0.71□□□□□ -2.3
RTCAO00442 MIR18B-201ENST00000454574 71 ntBASIC0.71□□□□□ -2.3
RTCAO00442 snoU13.2-201ENST00000459201 104 ntBASIC0.71□□□□□ -2.3
RTCAO00442 AC130289.1-201ENST00000577321 73 ntBASIC0.71□□□□□ -2.3
RTCAO00442 AC091932.4-201ENST00000623386 200 ntBASIC0.71□□□□□ -2.3
RTCAO00442 RNU6-1020P-201ENST00000363684 107 ntBASIC0.7□□□□□ -2.3
RTCAO00442 Y_RNA.188-201ENST00000363952 111 ntBASIC0.7□□□□□ -2.3
RTCAO00442 SNORA25.7-201ENST00000364375 127 ntBASIC0.7□□□□□ -2.3
RTCAO00442 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
RTCAO00442 RNU6-205P-201ENST00000390858 107 ntBASIC0.7□□□□□ -2.3
RTCAO00442 RNU7-62P-201ENST00000458856 62 ntBASIC0.7□□□□□ -2.3
RTCAO00442 Y_RNA.700-201ENST00000516806 100 ntBASIC0.7□□□□□ -2.3
RTCAO00442 MIR6504-201ENST00000613520 61 ntBASIC0.7□□□□□ -2.3
RTCAO00442 MIR1-1-201ENST00000362147 71 ntBASIC0.69□□□□□ -2.3
RTCAO00442 Y_RNA.191-201ENST00000363972 113 ntBASIC0.69□□□□□ -2.3
RTCAO00442 MIR605-201ENST00000385078 83 ntBASIC0.69□□□□□ -2.3
RTCAO00442 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.69□□□□□ -2.3
RTCAO00442 RNU6-1190P-201ENST00000410811 104 ntBASIC0.69□□□□□ -2.3
RTCAO00442 HMGN1P33-201ENST00000432945 451 ntBASIC0.69□□□□□ -2.3
RTCAO00442 AL138752.1-201ENST00000452964 351 ntBASIC0.69□□□□□ -2.3
RTCAO00442 RPS29P1-201ENST00000465274 159 ntBASIC0.69□□□□□ -2.3
RTCAO00442 Y_RNA.676-201ENST00000516393 96 ntBASIC0.69□□□□□ -2.3
RTCAO00442 AC072026.1-201ENST00000605023 201 ntBASIC0.69□□□□□ -2.3
RTCAO00442 MIR6740-201ENST00000618268 113 ntBASIC0.69□□□□□ -2.3
RTCAO00442 MIR6841-201ENST00000637129 72 ntBASIC0.69□□□□□ -2.3
RTCAO00442 MIR302B-201ENST00000362188 73 ntBASIC0.68□□□□□ -2.3
RTCAO00442 RNU6-379P-201ENST00000363813 104 ntBASIC0.68□□□□□ -2.3
RTCAO00442 Y_RNA.233-201ENST00000364407 101 ntBASIC0.68□□□□□ -2.3
RTCAO00442 RNU6-934P-201ENST00000365154 107 ntBASIC0.68□□□□□ -2.3
RTCAO00442 Y_RNA.552-201ENST00000384665 112 ntBASIC0.68□□□□□ -2.3
RTCAO00442 SNORD105-201ENST00000386910 85 ntBASIC0.68□□□□□ -2.3
RTCAO00442 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
RTCAO00442 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.68□□□□□ -2.3
RTCAO00442 MIR3152-201ENST00000579801 74 ntBASIC0.68□□□□□ -2.3
RTCAO00442 RNU6-1335P-201ENST00000365426 107 ntBASIC0.67□□□□□ -2.3
RTCAO00442 RNU6-47P-201ENST00000383866 107 ntBASIC0.67□□□□□ -2.3
RTCAO00442 Y_RNA.393-201ENST00000383936 102 ntBASIC0.67□□□□□ -2.3
RTCAO00442 Y_RNA.515-201ENST00000384535 112 ntBASIC0.67□□□□□ -2.3
RTCAO00442 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.67□□□□□ -2.3
RTCAO00442 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
RTCAO00442 Y_RNA.644-201ENST00000459006 113 ntBASIC0.67□□□□□ -2.3
RTCAO00442 Y_RNA.674-201ENST00000516362 113 ntBASIC0.67□□□□□ -2.3
RTCAO00442 RNA5SP121-201ENST00000516537 101 ntBASIC0.67□□□□□ -2.3
RTCAO00442 RNU6-1271P-201ENST00000517049 105 ntBASIC0.67□□□□□ -2.3
RTCAO00442 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
RTCAO00442 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
RTCAO00442 AC023934.1-201ENST00000574529 2389 ntBASIC0.67□□□□□ -2.3
RTCAO00442 Y_RNA.274-201ENST00000364714 101 ntBASIC0.66□□□□□ -2.3
RTCAO00442 MIR588-201ENST00000384900 83 ntBASIC0.66□□□□□ -2.3
RTCAO00442 MIR499A-201ENST00000384903 122 ntBASIC0.66□□□□□ -2.3
RTCAO00442 MT-TF-201ENST00000387314 71 ntBASIC0.66□□□□□ -2.3
RTCAO00442 AC107027.2-201ENST00000512197 115 ntBASIC0.66□□□□□ -2.3
RTCAO00442 AC018659.1-201ENST00000551083 169 ntBASIC0.66□□□□□ -2.3
RTCAO00442 CYP3A137P-201ENST00000562436 69 ntBASIC0.66□□□□□ -2.3
RTCAO00442 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.66□□□□□ -2.3
RTCAO00442 RMST_2.1-201ENST00000617263 136 ntBASIC0.66□□□□□ -2.3
RTCAO00442 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
RTCAO00442 MIR30D-201ENST00000362283 70 ntBASIC0.65□□□□□ -2.31
RTCAO00442 RNU6-200P-201ENST00000364743 107 ntBASIC0.65□□□□□ -2.31
RTCAO00442 RNU1-133P-201ENST00000364867 167 ntBASIC0.65□□□□□ -2.31
RTCAO00442 Y_RNA.476-201ENST00000384347 108 ntBASIC0.65□□□□□ -2.31
RTCAO00442 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
RTCAO00442 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.65□□□□□ -2.31
RTCAO00442 RNU6-1165P-201ENST00000410119 107 ntBASIC0.65□□□□□ -2.31
RTCAO00442 RNU6-893P-201ENST00000458841 100 ntBASIC0.65□□□□□ -2.31
RTCAO00442 snoU13.21-201ENST00000459368 105 ntBASIC0.65□□□□□ -2.31
RTCAO00442 RNU6-1219P-201ENST00000516143 112 ntBASIC0.65□□□□□ -2.31
RTCAO00442 RNU7-121P-201ENST00000516604 62 ntBASIC0.65□□□□□ -2.31
RTCAO00442 RNU6-1149P-201ENST00000516810 97 ntBASIC0.65□□□□□ -2.31
RTCAO00442 MIR3646-201ENST00000578301 84 ntBASIC0.65□□□□□ -2.31
RTCAO00442 MIR4452-201ENST00000583004 71 ntBASIC0.65□□□□□ -2.31
RTCAO00442 uc_338.6-201ENST00000613544 171 ntBASIC0.65□□□□□ -2.31
RTCAO00442 Y_RNA.297-201ENST00000364950 91 ntBASIC0.64□□□□□ -2.31
RTCAO00442 Y_RNA.785-201ENST00000384290 109 ntBASIC0.64□□□□□ -2.31
RTCAO00442 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
RTCAO00442 SNORD99-201ENST00000408612 74 ntBASIC0.64□□□□□ -2.31
RTCAO00442 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
RTCAO00442 SEPT7P4-201ENST00000437076 306 ntBASIC0.64□□□□□ -2.31
RTCAO00442 RNA5SP236-201ENST00000516169 116 ntBASIC0.64□□□□□ -2.31
RTCAO00442 MIR4804-201ENST00000581683 73 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms