Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RPL21P38-201ENST00000418090 167 ntBASIC-0.44□□□□□ -2.48
RBFOX3A6NFN3 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.44□□□□□ -2.48
RBFOX3A6NFN3 RNU6-397P-201ENST00000516226 104 ntBASIC-0.44□□□□□ -2.48
RBFOX3A6NFN3 MIR5706-201ENST00000579841 80 ntBASIC-0.44□□□□□ -2.48
RBFOX3A6NFN3 uc_338.36-201ENST00000622331 158 ntBASIC-0.44□□□□□ -2.48
RBFOX3A6NFN3 MIR302B-201ENST00000362188 73 ntBASIC-0.45□□□□□ -2.48
RBFOX3A6NFN3 RNU4-73P-201ENST00000363164 141 ntBASIC-0.45□□□□□ -2.48
RBFOX3A6NFN3 RNU6-726P-201ENST00000364680 107 ntBASIC-0.45□□□□□ -2.48
RBFOX3A6NFN3 SNORD81.2-201ENST00000365153 76 ntBASIC-0.45□□□□□ -2.48
RBFOX3A6NFN3 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.45□□□□□ -2.48
RBFOX3A6NFN3 MTATP6P26-201ENST00000445926 662 ntBASIC-0.45□□□□□ -2.48
RBFOX3A6NFN3 RNU6-475P-201ENST00000516073 104 ntBASIC-0.45□□□□□ -2.48
RBFOX3A6NFN3 RNA5SP395-201ENST00000516567 118 ntBASIC-0.45□□□□□ -2.48
RBFOX3A6NFN3 SNORA25.16-201ENST00000516741 121 ntBASIC-0.45□□□□□ -2.48
RBFOX3A6NFN3 CR383656.4-201ENST00000546909 122 ntBASIC-0.45□□□□□ -2.48
RBFOX3A6NFN3 MIR5692C2-201ENST00000577959 77 ntBASIC-0.45□□□□□ -2.48
RBFOX3A6NFN3 AL162376.1-201ENST00000624117 175 ntBASIC-0.45□□□□□ -2.48
RBFOX3A6NFN3 MIR4788-201ENST00000639104 80 ntBASIC-0.45□□□□□ -2.48
RBFOX3A6NFN3 MIR101-1-201ENST00000362265 75 ntBASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 SNORA63.5-201ENST00000363548 123 ntBASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 RNU6-284P-201ENST00000411105 106 ntBASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 MTND4LP11-201ENST00000422184 280 ntBASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 MTND1P14-201ENST00000427400 950 ntBASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 RNU7-45P-201ENST00000459460 63 ntBASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 AC138749.4-201ENST00000563970 127 ntBASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 MIR5688-201ENST00000580619 83 ntBASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 U7.6-201ENST00000610841 64 ntBASIC-0.46□□□□□ -2.48
RBFOX3A6NFN3 MIR342-201ENST00000362212 99 ntBASIC-0.47□□□□□ -2.48
RBFOX3A6NFN3 MIR148A-201ENST00000362215 68 ntBASIC-0.47□□□□□ -2.48
RBFOX3A6NFN3 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.47□□□□□ -2.48
RBFOX3A6NFN3 SNORA22B-201ENST00000383876 138 ntBASIC-0.47□□□□□ -2.48
RBFOX3A6NFN3 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.47□□□□□ -2.48
RBFOX3A6NFN3 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.47□□□□□ -2.48
RBFOX3A6NFN3 MIR526A2-201ENST00000390198 65 ntBASIC-0.47□□□□□ -2.48
RBFOX3A6NFN3 SNORA75.1-201ENST00000391130 148 ntBASIC-0.47□□□□□ -2.48
RBFOX3A6NFN3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.47□□□□□ -2.48
RBFOX3A6NFN3 AC109327.2-201ENST00000448339 378 ntBASIC-0.47□□□□□ -2.48
RBFOX3A6NFN3 MIR378D2-201ENST00000580636 98 ntBASIC-0.47□□□□□ -2.48
RBFOX3A6NFN3 AC092794.1-201ENST00000612734 582 ntBASIC-0.47□□□□□ -2.48
RBFOX3A6NFN3 AL162726.3-218ENST00000636401 95 ntBASIC-0.47□□□□□ -2.48
RBFOX3A6NFN3 MIR655-201ENST00000362159 97 ntBASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 RNU1-115P-201ENST00000365329 160 ntBASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 SNORD116-4-201ENST00000384733 96 ntBASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 RNY4P36-201ENST00000391116 96 ntBASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 AL589823.1-201ENST00000429577 183 ntBASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 MRPS35P2-201ENST00000508242 191 ntBASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 uc_338.28-201ENST00000612082 187 ntBASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 MIR548AZ-201ENST00000616567 95 ntBASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 AL606534.2-204ENST00000635008 178 ntBASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 MIR6841-201ENST00000637129 72 ntBASIC-0.48□□□□□ -2.49
RBFOX3A6NFN3 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 SNORD115-24-201ENST00000363528 82 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 SNORD114-11-201ENST00000363738 75 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 SNORD116-29-201ENST00000384516 83 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 MIR604-201ENST00000384880 94 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 MIR548L-201ENST00000408303 86 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 AC244250.2-201ENST00000418731 148 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 FGF7P6-202ENST00000451282 293 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 RNU6-758P-201ENST00000516292 89 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 SNORA20.3-201ENST00000516880 132 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 AL391099.1-201ENST00000624635 187 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 AC073869.6-201ENST00000640656 341 ntBASIC-0.49□□□□□ -2.49
RBFOX3A6NFN3 RNA5SP368-201ENST00000364298 116 ntBASIC-0.5□□□□□ -2.49
RBFOX3A6NFN3 RNU6-811P-201ENST00000384069 107 ntBASIC-0.5□□□□□ -2.49
RBFOX3A6NFN3 SNORA1-201ENST00000384107 130 ntBASIC-0.5□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.5□□□□□ -2.49
RBFOX3A6NFN3 MIR876-201ENST00000401147 81 ntBASIC-0.5□□□□□ -2.49
RBFOX3A6NFN3 RNA5SP451-201ENST00000410588 110 ntBASIC-0.5□□□□□ -2.49
RBFOX3A6NFN3 RNU6-130P-201ENST00000411112 103 ntBASIC-0.5□□□□□ -2.49
RBFOX3A6NFN3 RNU2-55P-201ENST00000411146 174 ntBASIC-0.5□□□□□ -2.49
RBFOX3A6NFN3 RNU7-80P-201ENST00000459562 61 ntBASIC-0.5□□□□□ -2.49
RBFOX3A6NFN3 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.5□□□□□ -2.49
RBFOX3A6NFN3 MIR4432-201ENST00000581823 84 ntBASIC-0.5□□□□□ -2.49
RBFOX3A6NFN3 AL590491.3-201ENST00000610731 82 ntBASIC-0.5□□□□□ -2.49
RBFOX3A6NFN3 PART1_1.1-201ENST00000611761 217 ntBASIC-0.5□□□□□ -2.49
RBFOX3A6NFN3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.5□□□□□ -2.49
RBFOX3A6NFN3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.51□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.51□□□□□ -2.49
RBFOX3A6NFN3 RNU6-480P-201ENST00000384332 107 ntBASIC-0.51□□□□□ -2.49
RBFOX3A6NFN3 HSPE1P25-201ENST00000455484 251 ntBASIC-0.51□□□□□ -2.49
RBFOX3A6NFN3 AC114755.3-201ENST00000481111 251 ntBASIC-0.51□□□□□ -2.49
RBFOX3A6NFN3 RNU7-161P-201ENST00000517289 62 ntBASIC-0.51□□□□□ -2.49
RBFOX3A6NFN3 MIR4263-201ENST00000584745 83 ntBASIC-0.51□□□□□ -2.49
RBFOX3A6NFN3 AC097639.2-201ENST00000603159 172 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms