Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNU7-70P-201ENST00000516941 66 ntBASIC1.45□□□□□ -2.18
COL4A3BPQ9Y5P4 MIR3660-201ENST00000584845 100 ntBASIC1.45□□□□□ -2.18
COL4A3BPQ9Y5P4 MIR6516-201ENST00000630554 81 ntBASIC1.45□□□□□ -2.18
COL4A3BPQ9Y5P4 RNU6-392P-201ENST00000364926 101 ntBASIC1.44□□□□□ -2.18
COL4A3BPQ9Y5P4 Y_RNA.351-201ENST00000365436 96 ntBASIC1.44□□□□□ -2.18
COL4A3BPQ9Y5P4 Y_RNA.357-201ENST00000365487 109 ntBASIC1.44□□□□□ -2.18
COL4A3BPQ9Y5P4 RNU6-597P-201ENST00000365620 102 ntBASIC1.44□□□□□ -2.18
COL4A3BPQ9Y5P4 MIR624-201ENST00000385217 97 ntBASIC1.44□□□□□ -2.18
COL4A3BPQ9Y5P4 SNORA40.6-201ENST00000391153 128 ntBASIC1.44□□□□□ -2.18
COL4A3BPQ9Y5P4 RNA5SP261-201ENST00000410536 106 ntBASIC1.44□□□□□ -2.18
COL4A3BPQ9Y5P4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.44□□□□□ -2.18
COL4A3BPQ9Y5P4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.44□□□□□ -2.18
COL4A3BPQ9Y5P4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.44□□□□□ -2.18
COL4A3BPQ9Y5P4 Y_RNA.337-201ENST00000365312 102 ntBASIC1.43□□□□□ -2.18
COL4A3BPQ9Y5P4 Y_RNA.785-201ENST00000384290 109 ntBASIC1.43□□□□□ -2.18
COL4A3BPQ9Y5P4 MIR548I3-201ENST00000408378 149 ntBASIC1.43□□□□□ -2.18
COL4A3BPQ9Y5P4 RNU2-11P-201ENST00000459191 187 ntBASIC1.43□□□□□ -2.18
COL4A3BPQ9Y5P4 RNU7-120P-201ENST00000459334 63 ntBASIC1.43□□□□□ -2.18
COL4A3BPQ9Y5P4 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.43□□□□□ -2.18
COL4A3BPQ9Y5P4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.43□□□□□ -2.18
COL4A3BPQ9Y5P4 MIR377-201ENST00000362145 69 ntBASIC1.42□□□□□ -2.18
COL4A3BPQ9Y5P4 MIR337-201ENST00000362281 93 ntBASIC1.42□□□□□ -2.18
COL4A3BPQ9Y5P4 SNORD114-24-201ENST00000365029 72 ntBASIC1.42□□□□□ -2.18
COL4A3BPQ9Y5P4 Y_RNA.393-201ENST00000383936 102 ntBASIC1.42□□□□□ -2.18
COL4A3BPQ9Y5P4 SNORD111-201ENST00000408139 94 ntBASIC1.42□□□□□ -2.18
COL4A3BPQ9Y5P4 SEPT7P4-201ENST00000437076 306 ntBASIC1.42□□□□□ -2.18
COL4A3BPQ9Y5P4 SNORA81.3-201ENST00000517283 198 ntBASIC1.42□□□□□ -2.18
COL4A3BPQ9Y5P4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.42□□□□□ -2.18
COL4A3BPQ9Y5P4 MIR4264-201ENST00000583520 66 ntBASIC1.42□□□□□ -2.18
COL4A3BPQ9Y5P4 MIR342-201ENST00000362212 99 ntBASIC1.41□□□□□ -2.18
COL4A3BPQ9Y5P4 SNORD113.3-201ENST00000364630 78 ntBASIC1.41□□□□□ -2.18
COL4A3BPQ9Y5P4 SNORA1.1-201ENST00000364671 133 ntBASIC1.41□□□□□ -2.18
COL4A3BPQ9Y5P4 AC022559.1-201ENST00000520905 205 ntBASIC1.41□□□□□ -2.18
COL4A3BPQ9Y5P4 AC131055.1-201ENST00000584626 316 ntBASIC1.41□□□□□ -2.18
COL4A3BPQ9Y5P4 AC106800.4-201ENST00000614905 153 ntBASIC1.41□□□□□ -2.18
COL4A3BPQ9Y5P4 RNU6-913P-201ENST00000390913 95 ntBASIC1.4□□□□□ -2.19
COL4A3BPQ9Y5P4 FABP5P4-201ENST00000437203 171 ntBASIC1.4□□□□□ -2.19
COL4A3BPQ9Y5P4 AC023827.1-201ENST00000569247 97 ntBASIC1.4□□□□□ -2.19
COL4A3BPQ9Y5P4 AL020996.3-201ENST00000606617 222 ntBASIC1.4□□□□□ -2.19
COL4A3BPQ9Y5P4 MIR6078-201ENST00000611069 100 ntBASIC1.4□□□□□ -2.19
COL4A3BPQ9Y5P4 AC012676.2-201ENST00000619258 186 ntBASIC1.4□□□□□ -2.19
COL4A3BPQ9Y5P4 Z97988.1-201ENST00000637697 135 ntBASIC1.4□□□□□ -2.19
COL4A3BPQ9Y5P4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.39□□□□□ -2.19
COL4A3BPQ9Y5P4 Y_RNA.240-201ENST00000364469 95 ntBASIC1.39□□□□□ -2.19
COL4A3BPQ9Y5P4 SNORA2B-201ENST00000384583 137 ntBASIC1.39□□□□□ -2.19
COL4A3BPQ9Y5P4 SNORD38B-201ENST00000384690 67 ntBASIC1.39□□□□□ -2.19
COL4A3BPQ9Y5P4 AC067940.1-201ENST00000458411 300 ntBASIC1.39□□□□□ -2.19
COL4A3BPQ9Y5P4 Y_RNA.662-201ENST00000516028 97 ntBASIC1.39□□□□□ -2.19
COL4A3BPQ9Y5P4 SNORD38B-202ENST00000625943 69 ntBASIC1.39□□□□□ -2.19
COL4A3BPQ9Y5P4 MIR376A2-201ENST00000636782 80 ntBASIC1.39□□□□□ -2.19
COL4A3BPQ9Y5P4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
COL4A3BPQ9Y5P4 RNU6-654P-201ENST00000364373 107 ntBASIC1.38□□□□□ -2.19
COL4A3BPQ9Y5P4 RNU6-53P-201ENST00000365367 106 ntBASIC1.38□□□□□ -2.19
COL4A3BPQ9Y5P4 RNU6-182P-201ENST00000516970 105 ntBASIC1.38□□□□□ -2.19
COL4A3BPQ9Y5P4 AC036111.3-201ENST00000526389 112 ntBASIC1.38□□□□□ -2.19
COL4A3BPQ9Y5P4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.38□□□□□ -2.19
COL4A3BPQ9Y5P4 MIR8055-201ENST00000610739 97 ntBASIC1.38□□□□□ -2.19
COL4A3BPQ9Y5P4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.37□□□□□ -2.19
COL4A3BPQ9Y5P4 RNU6-239P-201ENST00000390990 99 ntBASIC1.37□□□□□ -2.19
COL4A3BPQ9Y5P4 MIR942-201ENST00000401111 86 ntBASIC1.37□□□□□ -2.19
COL4A3BPQ9Y5P4 RNU6-994P-201ENST00000410507 111 ntBASIC1.37□□□□□ -2.19
COL4A3BPQ9Y5P4 MTND5P15-201ENST00000434246 349 ntBASIC1.37□□□□□ -2.19
COL4A3BPQ9Y5P4 AC091932.4-201ENST00000623386 200 ntBASIC1.37□□□□□ -2.19
COL4A3BPQ9Y5P4 AL596211.1-201ENST00000569873 2277 ntBASIC1.36□□□□□ -2.19
COL4A3BPQ9Y5P4 RNU1-133P-201ENST00000364867 167 ntBASIC1.36□□□□□ -2.19
COL4A3BPQ9Y5P4 RNU6-125P-201ENST00000384505 107 ntBASIC1.36□□□□□ -2.19
COL4A3BPQ9Y5P4 SNORD124-201ENST00000459577 104 ntBASIC1.36□□□□□ -2.19
COL4A3BPQ9Y5P4 MIR3152-201ENST00000579801 74 ntBASIC1.36□□□□□ -2.19
COL4A3BPQ9Y5P4 MIR4661-201ENST00000582720 75 ntBASIC1.36□□□□□ -2.19
COL4A3BPQ9Y5P4 AL391516.1-201ENST00000554380 2449 ntBASIC1.36□□□□□ -2.19
COL4A3BPQ9Y5P4 RNU4-84P-201ENST00000364200 139 ntBASIC1.35□□□□□ -2.19
COL4A3BPQ9Y5P4 RNU6-768P-201ENST00000384683 107 ntBASIC1.35□□□□□ -2.19
COL4A3BPQ9Y5P4 SNORA75.5-201ENST00000391291 81 ntBASIC1.35□□□□□ -2.19
COL4A3BPQ9Y5P4 RNU6-861P-201ENST00000516745 106 ntBASIC1.35□□□□□ -2.19
COL4A3BPQ9Y5P4 MIR3646-201ENST00000578301 84 ntBASIC1.35□□□□□ -2.19
COL4A3BPQ9Y5P4 AC004792.1-201ENST00000614523 137 ntBASIC1.35□□□□□ -2.19
COL4A3BPQ9Y5P4 MIR8070-201ENST00000616510 88 ntBASIC1.35□□□□□ -2.19
COL4A3BPQ9Y5P4 AC091895.1-201ENST00000624494 256 ntBASIC1.35□□□□□ -2.19
COL4A3BPQ9Y5P4 SNORA20-201ENST00000384662 132 ntBASIC1.34□□□□□ -2.19
COL4A3BPQ9Y5P4 RPS3AP1-201ENST00000413190 320 ntBASIC1.34□□□□□ -2.19
COL4A3BPQ9Y5P4 RNU6-1149P-201ENST00000516810 97 ntBASIC1.34□□□□□ -2.19
COL4A3BPQ9Y5P4 HSPE1P19-201ENST00000603327 295 ntBASIC1.34□□□□□ -2.19
COL4A3BPQ9Y5P4 RNU6-818P-201ENST00000364837 108 ntBASIC1.33□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6-1318P-201ENST00000365389 103 ntBASIC1.33□□□□□ -2.2
COL4A3BPQ9Y5P4 RNA5SP95-201ENST00000410319 137 ntBASIC1.33□□□□□ -2.2
COL4A3BPQ9Y5P4 PDCD5P2-201ENST00000507570 312 ntBASIC1.33□□□□□ -2.2
COL4A3BPQ9Y5P4 UBL5P1-201ENST00000507979 193 ntBASIC1.33□□□□□ -2.2
COL4A3BPQ9Y5P4 AL136317.1-201ENST00000612653 226 ntBASIC1.33□□□□□ -2.2
COL4A3BPQ9Y5P4 MIR6844-201ENST00000637122 62 ntBASIC1.33□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6-580P-201ENST00000365159 107 ntBASIC1.32□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6-205P-201ENST00000390858 107 ntBASIC1.32□□□□□ -2.2
COL4A3BPQ9Y5P4 AC090844.1-201ENST00000422019 156 ntBASIC1.32□□□□□ -2.2
COL4A3BPQ9Y5P4 HMGN1P33-201ENST00000432945 451 ntBASIC1.32□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.32□□□□□ -2.2
COL4A3BPQ9Y5P4 SCARNA15-202ENST00000516881 127 ntBASIC1.32□□□□□ -2.2
COL4A3BPQ9Y5P4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
COL4A3BPQ9Y5P4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6-682P-201ENST00000363843 106 ntBASIC1.31□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6-1135P-201ENST00000411083 103 ntBASIC1.31□□□□□ -2.2
COL4A3BPQ9Y5P4 OR2A41P-201ENST00000473586 105 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms