Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MIR376A2-201ENST00000636782 80 ntBASIC1.09□□□□□ -2.23
YIPF1Q9Y548 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
YIPF1Q9Y548 RNU6-1189P-201ENST00000383958 107 ntBASIC1.08□□□□□ -2.24
YIPF1Q9Y548 SNORA80D-201ENST00000384488 135 ntBASIC1.08□□□□□ -2.24
YIPF1Q9Y548 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
YIPF1Q9Y548 MTND5P15-201ENST00000434246 349 ntBASIC1.08□□□□□ -2.24
YIPF1Q9Y548 RNU6-312P-201ENST00000364629 107 ntBASIC1.07□□□□□ -2.24
YIPF1Q9Y548 Y_RNA.330-201ENST00000365230 109 ntBASIC1.07□□□□□ -2.24
YIPF1Q9Y548 Y_RNA.440-201ENST00000384120 114 ntBASIC1.07□□□□□ -2.24
YIPF1Q9Y548 Y_RNA.542-201ENST00000384641 111 ntBASIC1.07□□□□□ -2.24
YIPF1Q9Y548 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
YIPF1Q9Y548 SEPT7P4-201ENST00000437076 306 ntBASIC1.07□□□□□ -2.24
YIPF1Q9Y548 AL392103.1-201ENST00000447000 198 ntBASIC1.07□□□□□ -2.24
YIPF1Q9Y548 MIR4431-201ENST00000579990 94 ntBASIC1.07□□□□□ -2.24
YIPF1Q9Y548 AC072026.1-201ENST00000605023 201 ntBASIC1.07□□□□□ -2.24
YIPF1Q9Y548 AC027335.2-201ENST00000624030 375 ntBASIC1.07□□□□□ -2.24
YIPF1Q9Y548 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.06□□□□□ -2.24
YIPF1Q9Y548 Y_RNA.29-201ENST00000362570 113 ntBASIC1.06□□□□□ -2.24
YIPF1Q9Y548 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
YIPF1Q9Y548 SNORA24-201ENST00000384096 131 ntBASIC1.06□□□□□ -2.24
YIPF1Q9Y548 AC002429.1-201ENST00000437672 148 ntBASIC1.06□□□□□ -2.24
YIPF1Q9Y548 RNU7-21P-201ENST00000459430 62 ntBASIC1.06□□□□□ -2.24
YIPF1Q9Y548 RPS29P24-201ENST00000486345 171 ntBASIC1.06□□□□□ -2.24
YIPF1Q9Y548 RNA5SP220-201ENST00000516298 104 ntBASIC1.06□□□□□ -2.24
YIPF1Q9Y548 RNU6-861P-201ENST00000516745 106 ntBASIC1.06□□□□□ -2.24
YIPF1Q9Y548 SNORA81.3-201ENST00000517283 198 ntBASIC1.06□□□□□ -2.24
YIPF1Q9Y548 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.06□□□□□ -2.24
YIPF1Q9Y548 AC008163.1-202ENST00000636004 2889 ntBASIC1.06□□□□□ -2.24
YIPF1Q9Y548 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
YIPF1Q9Y548 MIR342-201ENST00000362212 99 ntBASIC1.05□□□□□ -2.24
YIPF1Q9Y548 RNU6-1318P-201ENST00000365389 103 ntBASIC1.05□□□□□ -2.24
YIPF1Q9Y548 RNU6-1292P-201ENST00000383856 107 ntBASIC1.05□□□□□ -2.24
YIPF1Q9Y548 RNU6-1336P-201ENST00000383886 109 ntBASIC1.05□□□□□ -2.24
YIPF1Q9Y548 Y_RNA.521-201ENST00000384560 114 ntBASIC1.05□□□□□ -2.24
YIPF1Q9Y548 RNU6-913P-201ENST00000390913 95 ntBASIC1.05□□□□□ -2.24
YIPF1Q9Y548 RNU7-40P-201ENST00000516397 64 ntBASIC1.05□□□□□ -2.24
YIPF1Q9Y548 RNA5SP404-201ENST00000517118 132 ntBASIC1.05□□□□□ -2.24
YIPF1Q9Y548 AL365205.2-201ENST00000594586 68 ntBASIC1.05□□□□□ -2.24
YIPF1Q9Y548 AC004792.1-201ENST00000614523 137 ntBASIC1.05□□□□□ -2.24
YIPF1Q9Y548 SEPT14P17-201ENST00000617978 177 ntBASIC1.05□□□□□ -2.24
YIPF1Q9Y548 MIR6734-201ENST00000621166 68 ntBASIC1.05□□□□□ -2.24
YIPF1Q9Y548 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
YIPF1Q9Y548 Y_RNA.351-201ENST00000365436 96 ntBASIC1.04□□□□□ -2.24
YIPF1Q9Y548 SNORA70.7-201ENST00000384159 133 ntBASIC1.04□□□□□ -2.24
YIPF1Q9Y548 AL035398.1-201ENST00000430869 322 ntBASIC1.04□□□□□ -2.24
YIPF1Q9Y548 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.04□□□□□ -2.24
YIPF1Q9Y548 RNU7-120P-201ENST00000459334 63 ntBASIC1.04□□□□□ -2.24
YIPF1Q9Y548 snoU13.16-201ENST00000459350 104 ntBASIC1.04□□□□□ -2.24
YIPF1Q9Y548 MIR151B-201ENST00000584249 96 ntBASIC1.04□□□□□ -2.24
YIPF1Q9Y548 MIR6516-201ENST00000630554 81 ntBASIC1.04□□□□□ -2.24
YIPF1Q9Y548 MIR373-201ENST00000362273 69 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 RNU6-682P-201ENST00000363843 106 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 RNU6-654P-201ENST00000364373 107 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 RNU6-42P-201ENST00000384165 107 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 Y_RNA.785-201ENST00000384290 109 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 SNORD12-201ENST00000391002 90 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 AC063976.4-201ENST00000421971 163 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 AC090844.1-201ENST00000422019 156 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 RNU2-11P-201ENST00000459191 187 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 RNU7-90P-201ENST00000459216 62 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 RNU6-998P-201ENST00000515894 101 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 Y_RNA.700-201ENST00000516806 100 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 RNU11-2P-201ENST00000516898 142 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 MIR5197-201ENST00000583721 112 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
YIPF1Q9Y548 MIR6788-201ENST00000618842 66 ntBASIC1.03□□□□□ -2.24
YIPF1Q9Y548 SNORA25.7-201ENST00000364375 127 ntBASIC1.02□□□□□ -2.25
YIPF1Q9Y548 Y_RNA.357-201ENST00000365487 109 ntBASIC1.02□□□□□ -2.25
YIPF1Q9Y548 RNU6-768P-201ENST00000384683 107 ntBASIC1.02□□□□□ -2.25
YIPF1Q9Y548 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
YIPF1Q9Y548 RNA5SP95-201ENST00000410319 137 ntBASIC1.02□□□□□ -2.25
YIPF1Q9Y548 RNU7-73P-201ENST00000458743 63 ntBASIC1.02□□□□□ -2.25
YIPF1Q9Y548 RNU7-96P-201ENST00000459535 64 ntBASIC1.02□□□□□ -2.25
YIPF1Q9Y548 RNU7-53P-201ENST00000516705 60 ntBASIC1.02□□□□□ -2.25
YIPF1Q9Y548 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.02□□□□□ -2.25
YIPF1Q9Y548 AC023827.1-201ENST00000569247 97 ntBASIC1.02□□□□□ -2.25
YIPF1Q9Y548 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
YIPF1Q9Y548 MIR8055-201ENST00000610739 97 ntBASIC1.02□□□□□ -2.25
YIPF1Q9Y548 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
YIPF1Q9Y548 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
YIPF1Q9Y548 Y_RNA.240-201ENST00000364469 95 ntBASIC1.01□□□□□ -2.25
YIPF1Q9Y548 RNU6-396P-201ENST00000365369 105 ntBASIC1.01□□□□□ -2.25
YIPF1Q9Y548 MIR548J-201ENST00000408833 112 ntBASIC1.01□□□□□ -2.25
YIPF1Q9Y548 RNA5SP127-201ENST00000411051 133 ntBASIC1.01□□□□□ -2.25
YIPF1Q9Y548 RNU5E-9P-201ENST00000411164 104 ntBASIC1.01□□□□□ -2.25
YIPF1Q9Y548 HMGN1P33-201ENST00000432945 451 ntBASIC1.01□□□□□ -2.25
YIPF1Q9Y548 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.01□□□□□ -2.25
YIPF1Q9Y548 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
YIPF1Q9Y548 AC107027.2-201ENST00000512197 115 ntBASIC1.01□□□□□ -2.25
YIPF1Q9Y548 Y_RNA.662-201ENST00000516028 97 ntBASIC1.01□□□□□ -2.25
YIPF1Q9Y548 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.01□□□□□ -2.25
YIPF1Q9Y548 MIR3671-201ENST00000580455 88 ntBASIC1.01□□□□□ -2.25
YIPF1Q9Y548 Y_RNA.337-201ENST00000365312 102 ntBASIC1□□□□□ -2.25
YIPF1Q9Y548 RNU6-597P-201ENST00000365620 102 ntBASIC1□□□□□ -2.25
YIPF1Q9Y548 Y_RNA.393-201ENST00000383936 102 ntBASIC1□□□□□ -2.25
YIPF1Q9Y548 MIR19B1-201ENST00000384829 87 ntBASIC1□□□□□ -2.25
YIPF1Q9Y548 MIR624-201ENST00000385217 97 ntBASIC1□□□□□ -2.25
YIPF1Q9Y548 RNU6-1190P-201ENST00000410811 104 ntBASIC1□□□□□ -2.25
YIPF1Q9Y548 MRPL35P3-201ENST00000421557 364 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms