Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RNU6-938P-201ENST00000411285 103 ntBASIC1.94□□□□□ -2.1
CDK11AQ9UQ88 SNORD36C-201ENST00000516733 66 ntBASIC1.94□□□□□ -2.1
CDK11AQ9UQ88 MIR5197-201ENST00000583721 112 ntBASIC1.94□□□□□ -2.1
CDK11AQ9UQ88 AL078603.1-201ENST00000603824 313 ntBASIC1.94□□□□□ -2.1
CDK11AQ9UQ88 Y_RNA.8-201ENST00000362353 102 ntBASIC1.93□□□□□ -2.1
CDK11AQ9UQ88 RNU6-818P-201ENST00000364837 108 ntBASIC1.93□□□□□ -2.1
CDK11AQ9UQ88 SNORD116-18-201ENST00000383961 92 ntBASIC1.93□□□□□ -2.1
CDK11AQ9UQ88 RNU6-804P-201ENST00000384286 107 ntBASIC1.93□□□□□ -2.1
CDK11AQ9UQ88 MIR150-201ENST00000385048 84 ntBASIC1.93□□□□□ -2.1
CDK11AQ9UQ88 SNORD28B-201ENST00000390993 75 ntBASIC1.93□□□□□ -2.1
CDK11AQ9UQ88 RPS26P48-201ENST00000491713 339 ntBASIC1.93□□□□□ -2.1
CDK11AQ9UQ88 RNU6-1212P-201ENST00000517023 104 ntBASIC1.93□□□□□ -2.1
CDK11AQ9UQ88 AC090821.2-201ENST00000523552 176 ntBASIC1.93□□□□□ -2.1
CDK11AQ9UQ88 AC008133.2-201ENST00000624540 351 ntBASIC1.93□□□□□ -2.1
CDK11AQ9UQ88 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDK11AQ9UQ88 RNA5SP48-201ENST00000363969 126 ntBASIC1.92□□□□□ -2.1
CDK11AQ9UQ88 SNORA51.10-201ENST00000384418 136 ntBASIC1.92□□□□□ -2.1
CDK11AQ9UQ88 RNA5SP61-201ENST00000516453 100 ntBASIC1.92□□□□□ -2.1
CDK11AQ9UQ88 Y_RNA.778-201ENST00000620203 90 ntBASIC1.92□□□□□ -2.1
CDK11AQ9UQ88 RNA5SP327-201ENST00000362494 101 ntBASIC1.91□□□□□ -2.1
CDK11AQ9UQ88 RNU6-151P-201ENST00000364158 107 ntBASIC1.91□□□□□ -2.1
CDK11AQ9UQ88 Y_RNA.440-201ENST00000384120 114 ntBASIC1.91□□□□□ -2.1
CDK11AQ9UQ88 RNU6-939P-201ENST00000384634 107 ntBASIC1.91□□□□□ -2.1
CDK11AQ9UQ88 RPS29P29-201ENST00000456396 171 ntBASIC1.91□□□□□ -2.1
CDK11AQ9UQ88 RNU7-67P-201ENST00000459003 62 ntBASIC1.91□□□□□ -2.1
CDK11AQ9UQ88 RNU7-80P-201ENST00000459562 61 ntBASIC1.91□□□□□ -2.1
CDK11AQ9UQ88 RPS29P24-201ENST00000486345 171 ntBASIC1.91□□□□□ -2.1
CDK11AQ9UQ88 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.91□□□□□ -2.1
CDK11AQ9UQ88 MIR4791-201ENST00000607666 84 ntBASIC1.91□□□□□ -2.1
CDK11AQ9UQ88 AC243994.1-201ENST00000618627 109 ntBASIC1.91□□□□□ -2.1
CDK11AQ9UQ88 Y_RNA.454-201ENST00000384224 113 ntBASIC1.9□□□□□ -2.11
CDK11AQ9UQ88 Y_RNA.466-201ENST00000384294 113 ntBASIC1.9□□□□□ -2.11
CDK11AQ9UQ88 MIR618-201ENST00000385287 98 ntBASIC1.9□□□□□ -2.11
CDK11AQ9UQ88 RNU7-96P-201ENST00000459535 64 ntBASIC1.9□□□□□ -2.11
CDK11AQ9UQ88 RNU2-13P-201ENST00000515909 113 ntBASIC1.9□□□□□ -2.11
CDK11AQ9UQ88 RNU7-70P-201ENST00000516941 66 ntBASIC1.9□□□□□ -2.11
CDK11AQ9UQ88 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.9□□□□□ -2.11
CDK11AQ9UQ88 AC131055.1-201ENST00000584626 316 ntBASIC1.9□□□□□ -2.11
CDK11AQ9UQ88 RNU6-1082P-201ENST00000364574 107 ntBASIC1.89□□□□□ -2.11
CDK11AQ9UQ88 RNU6-588P-201ENST00000410281 105 ntBASIC1.89□□□□□ -2.11
CDK11AQ9UQ88 AL133373.1-201ENST00000497098 94 ntBASIC1.89□□□□□ -2.11
CDK11AQ9UQ88 RNU7-53P-201ENST00000516705 60 ntBASIC1.89□□□□□ -2.11
CDK11AQ9UQ88 AC112693.2-201ENST00000556538 232 ntBASIC1.89□□□□□ -2.11
CDK11AQ9UQ88 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.89□□□□□ -2.11
CDK11AQ9UQ88 MIR4251-201ENST00000635819 61 ntBASIC1.89□□□□□ -2.11
CDK11AQ9UQ88 MIR3658-201ENST00000636291 56 ntBASIC1.89□□□□□ -2.11
CDK11AQ9UQ88 RNU4-11P-201ENST00000365287 132 ntBASIC1.88□□□□□ -2.11
CDK11AQ9UQ88 RNU6-1130P-201ENST00000365434 107 ntBASIC1.88□□□□□ -2.11
CDK11AQ9UQ88 Y_RNA.351-201ENST00000365436 96 ntBASIC1.88□□□□□ -2.11
CDK11AQ9UQ88 Y_RNA.398-201ENST00000383952 99 ntBASIC1.88□□□□□ -2.11
CDK11AQ9UQ88 MIR513C-201ENST00000401352 84 ntBASIC1.88□□□□□ -2.11
CDK11AQ9UQ88 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.88□□□□□ -2.11
CDK11AQ9UQ88 AL035398.1-201ENST00000430869 322 ntBASIC1.88□□□□□ -2.11
CDK11AQ9UQ88 RNU7-41P-201ENST00000515917 61 ntBASIC1.88□□□□□ -2.11
CDK11AQ9UQ88 AL096861.1-201ENST00000610899 123 ntBASIC1.88□□□□□ -2.11
CDK11AQ9UQ88 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.88□□□□□ -2.11
CDK11AQ9UQ88 AC021753.1-201ENST00000635724 168 ntBASIC1.88□□□□□ -2.11
CDK11AQ9UQ88 SNORA24-201ENST00000384096 131 ntBASIC1.87□□□□□ -2.11
CDK11AQ9UQ88 MIR570-201ENST00000384917 97 ntBASIC1.87□□□□□ -2.11
CDK11AQ9UQ88 RNU6-165P-201ENST00000517170 99 ntBASIC1.87□□□□□ -2.11
CDK11AQ9UQ88 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CDK11AQ9UQ88 Y_RNA.400-201ENST00000383963 111 ntBASIC1.86□□□□□ -2.11
CDK11AQ9UQ88 MIR222-201ENST00000384992 110 ntBASIC1.86□□□□□ -2.11
CDK11AQ9UQ88 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.86□□□□□ -2.11
CDK11AQ9UQ88 snoU13.16-201ENST00000459350 104 ntBASIC1.86□□□□□ -2.11
CDK11AQ9UQ88 AC068338.1-201ENST00000565567 176 ntBASIC1.86□□□□□ -2.11
CDK11AQ9UQ88 MIR3192-201ENST00000584920 77 ntBASIC1.86□□□□□ -2.11
CDK11AQ9UQ88 MIR6734-201ENST00000621166 68 ntBASIC1.86□□□□□ -2.11
CDK11AQ9UQ88 MIR302B-201ENST00000362188 73 ntBASIC1.85□□□□□ -2.11
CDK11AQ9UQ88 RNU6-1336P-201ENST00000383886 109 ntBASIC1.85□□□□□ -2.11
CDK11AQ9UQ88 RNU6-1062P-201ENST00000383908 107 ntBASIC1.85□□□□□ -2.11
CDK11AQ9UQ88 Y_RNA.494-201ENST00000384432 111 ntBASIC1.85□□□□□ -2.11
CDK11AQ9UQ88 MTATP6P21-201ENST00000440681 189 ntBASIC1.85□□□□□ -2.11
CDK11AQ9UQ88 RNU6-998P-201ENST00000515894 101 ntBASIC1.85□□□□□ -2.11
CDK11AQ9UQ88 RNU6-958P-201ENST00000516995 106 ntBASIC1.85□□□□□ -2.11
CDK11AQ9UQ88 SNORD18B-201ENST00000365659 72 ntBASIC1.84□□□□□ -2.11
CDK11AQ9UQ88 Y_RNA.540-201ENST00000384638 111 ntBASIC1.84□□□□□ -2.11
CDK11AQ9UQ88 Y_RNA.584-201ENST00000391090 114 ntBASIC1.84□□□□□ -2.11
CDK11AQ9UQ88 RNU6-1054P-201ENST00000411293 104 ntBASIC1.84□□□□□ -2.11
CDK11AQ9UQ88 RNU6-1149P-201ENST00000516810 97 ntBASIC1.84□□□□□ -2.11
CDK11AQ9UQ88 MIR376A2-201ENST00000636782 80 ntBASIC1.84□□□□□ -2.11
CDK11AQ9UQ88 MIR342-201ENST00000362212 99 ntBASIC1.83□□□□□ -2.12
CDK11AQ9UQ88 Y_RNA.170-201ENST00000363746 110 ntBASIC1.83□□□□□ -2.12
CDK11AQ9UQ88 SNORA25-201ENST00000384384 134 ntBASIC1.83□□□□□ -2.12
CDK11AQ9UQ88 Y_RNA.497-201ENST00000384447 98 ntBASIC1.83□□□□□ -2.12
CDK11AQ9UQ88 MIR520E-201ENST00000384867 87 ntBASIC1.83□□□□□ -2.12
CDK11AQ9UQ88 RNU7-73P-201ENST00000458743 63 ntBASIC1.83□□□□□ -2.12
CDK11AQ9UQ88 SNORA31.4-201ENST00000516049 129 ntBASIC1.83□□□□□ -2.12
CDK11AQ9UQ88 MIR548X2-201ENST00000579776 100 ntBASIC1.83□□□□□ -2.12
CDK11AQ9UQ88 MIR4295-201ENST00000585286 85 ntBASIC1.83□□□□□ -2.12
CDK11AQ9UQ88 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.83□□□□□ -2.12
CDK11AQ9UQ88 MIR6767-201ENST00000637302 66 ntBASIC1.83□□□□□ -2.12
CDK11AQ9UQ88 Y_RNA.52-201ENST00000362760 96 ntBASIC1.82□□□□□ -2.12
CDK11AQ9UQ88 SNORD114-27-201ENST00000363766 70 ntBASIC1.82□□□□□ -2.12
CDK11AQ9UQ88 RNU1-133P-201ENST00000364867 167 ntBASIC1.82□□□□□ -2.12
CDK11AQ9UQ88 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CDK11AQ9UQ88 RNU2-11P-201ENST00000459191 187 ntBASIC1.82□□□□□ -2.12
CDK11AQ9UQ88 RNU7-200P-201ENST00000516105 62 ntBASIC1.82□□□□□ -2.12
CDK11AQ9UQ88 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.82□□□□□ -2.12
CDK11AQ9UQ88 AL022345.2-201ENST00000606307 135 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms