Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PDZRN3Q9UPQ7 RNU6-630P-201ENST00000391258 106 ntBASIC3.47□□□□□ -1.85
PDZRN3Q9UPQ7 RNA5SP492-201ENST00000411330 114 ntBASIC3.47□□□□□ -1.85
PDZRN3Q9UPQ7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.47□□□□□ -1.85
PDZRN3Q9UPQ7 RNU7-53P-201ENST00000516705 60 ntBASIC3.47□□□□□ -1.85
PDZRN3Q9UPQ7 RNU6-1116P-201ENST00000517269 99 ntBASIC3.47□□□□□ -1.85
PDZRN3Q9UPQ7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.47□□□□□ -1.85
PDZRN3Q9UPQ7 MIR4791-201ENST00000607666 84 ntBASIC3.47□□□□□ -1.85
PDZRN3Q9UPQ7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.47□□□□□ -1.85
PDZRN3Q9UPQ7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDZRN3Q9UPQ7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
PDZRN3Q9UPQ7 RNU1-112P-201ENST00000364401 164 ntBASIC3.46□□□□□ -1.86
PDZRN3Q9UPQ7 SNORA8-201ENST00000384574 139 ntBASIC3.46□□□□□ -1.86
PDZRN3Q9UPQ7 RNA5SP292-201ENST00000390974 118 ntBASIC3.46□□□□□ -1.86
PDZRN3Q9UPQ7 FO393413.1-201ENST00000402892 195 ntBASIC3.46□□□□□ -1.86
PDZRN3Q9UPQ7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.46□□□□□ -1.86
PDZRN3Q9UPQ7 SNORD53-201ENST00000579969 78 ntBASIC3.46□□□□□ -1.86
PDZRN3Q9UPQ7 MIR3605-201ENST00000583214 100 ntBASIC3.46□□□□□ -1.86
PDZRN3Q9UPQ7 MIR4765-201ENST00000585007 77 ntBASIC3.46□□□□□ -1.86
PDZRN3Q9UPQ7 AL020996.3-201ENST00000606617 222 ntBASIC3.46□□□□□ -1.86
PDZRN3Q9UPQ7 AL512598.1-201ENST00000610158 273 ntBASIC3.46□□□□□ -1.86
PDZRN3Q9UPQ7 AC105081.1-201ENST00000617727 106 ntBASIC3.46□□□□□ -1.86
PDZRN3Q9UPQ7 Y_RNA.264-201ENST00000364665 102 ntBASIC3.45□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-424P-201ENST00000384367 105 ntBASIC3.45□□□□□ -1.86
PDZRN3Q9UPQ7 MIR504-201ENST00000385065 83 ntBASIC3.45□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-913P-201ENST00000390913 95 ntBASIC3.45□□□□□ -1.86
PDZRN3Q9UPQ7 SNORA9.3-201ENST00000516383 129 ntBASIC3.45□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-977P-201ENST00000516411 103 ntBASIC3.45□□□□□ -1.86
PDZRN3Q9UPQ7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDZRN3Q9UPQ7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDZRN3Q9UPQ7 RNA5SP323-201ENST00000391094 133 ntBASIC3.44□□□□□ -1.86
PDZRN3Q9UPQ7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.44□□□□□ -1.86
PDZRN3Q9UPQ7 AC015922.2-201ENST00000435593 184 ntBASIC3.44□□□□□ -1.86
PDZRN3Q9UPQ7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.44□□□□□ -1.86
PDZRN3Q9UPQ7 RNU7-48P-201ENST00000458875 63 ntBASIC3.44□□□□□ -1.86
PDZRN3Q9UPQ7 AL163195.1-201ENST00000496941 348 ntBASIC3.44□□□□□ -1.86
PDZRN3Q9UPQ7 AC008413.1-201ENST00000511864 177 ntBASIC3.44□□□□□ -1.86
PDZRN3Q9UPQ7 RNA5SP112-201ENST00000515937 99 ntBASIC3.44□□□□□ -1.86
PDZRN3Q9UPQ7 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.44□□□□□ -1.86
PDZRN3Q9UPQ7 Y_RNA.98-201ENST00000363109 102 ntBASIC3.43□□□□□ -1.86
PDZRN3Q9UPQ7 SNORA25.4-201ENST00000363666 124 ntBASIC3.43□□□□□ -1.86
PDZRN3Q9UPQ7 SNORA70.7-201ENST00000384159 133 ntBASIC3.43□□□□□ -1.86
PDZRN3Q9UPQ7 SNORA26.7-201ENST00000391288 122 ntBASIC3.43□□□□□ -1.86
PDZRN3Q9UPQ7 AC092628.1-201ENST00000436250 252 ntBASIC3.43□□□□□ -1.86
PDZRN3Q9UPQ7 RNU7-67P-201ENST00000459003 62 ntBASIC3.43□□□□□ -1.86
PDZRN3Q9UPQ7 snoU13.26-201ENST00000459452 105 ntBASIC3.43□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-991P-201ENST00000516168 107 ntBASIC3.43□□□□□ -1.86
PDZRN3Q9UPQ7 RNA5SP148-201ENST00000516527 94 ntBASIC3.43□□□□□ -1.86
PDZRN3Q9UPQ7 SNORA18.5-201ENST00000516616 101 ntBASIC3.43□□□□□ -1.86
PDZRN3Q9UPQ7 RNU7-137P-201ENST00000516788 62 ntBASIC3.43□□□□□ -1.86
PDZRN3Q9UPQ7 MIR8066-201ENST00000617280 78 ntBASIC3.43□□□□□ -1.86
PDZRN3Q9UPQ7 MIR7843-201ENST00000622274 79 ntBASIC3.43□□□□□ -1.86
PDZRN3Q9UPQ7 HSBP1P2-201ENST00000299671 229 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 MIR26A1-201ENST00000362205 77 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 SNORD114-10-201ENST00000363409 72 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-669P-201ENST00000365575 107 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 U8.9-201ENST00000365667 134 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 SNORA24-201ENST00000384096 131 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 MIR627-201ENST00000384979 97 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-447P-201ENST00000410293 104 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-1118P-201ENST00000410382 104 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-1076P-201ENST00000410397 104 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-355P-201ENST00000410427 104 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-791P-201ENST00000410467 104 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-705P-201ENST00000410601 104 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-1100P-201ENST00000410691 104 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-860P-201ENST00000410860 104 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-1217P-201ENST00000411276 104 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-785P-201ENST00000411324 104 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 AC245047.7-201ENST00000440265 293 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 RPS29P29-201ENST00000456396 171 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 AC067747.1-201ENST00000608026 250 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 U6.90-201ENST00000614007 104 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 U6.70-201ENST00000620287 104 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 UCA1.1-201ENST00000620952 75 ntBASIC3.42□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-208P-201ENST00000362431 107 ntBASIC3.41□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-330P-201ENST00000363015 107 ntBASIC3.41□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-546P-201ENST00000383991 107 ntBASIC3.41□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-811P-201ENST00000384069 107 ntBASIC3.41□□□□□ -1.86
PDZRN3Q9UPQ7 RNU6-1086P-201ENST00000410930 100 ntBASIC3.41□□□□□ -1.86
PDZRN3Q9UPQ7 AC110620.1-201ENST00000416042 228 ntBASIC3.41□□□□□ -1.86
PDZRN3Q9UPQ7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDZRN3Q9UPQ7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PDZRN3Q9UPQ7 MIRLET7C-201ENST00000362160 84 ntBASIC3.4□□□□□ -1.87
PDZRN3Q9UPQ7 Y_RNA.443-201ENST00000384135 111 ntBASIC3.4□□□□□ -1.87
PDZRN3Q9UPQ7 RNU6-163P-201ENST00000384396 106 ntBASIC3.4□□□□□ -1.87
PDZRN3Q9UPQ7 RNU7-73P-201ENST00000458743 63 ntBASIC3.4□□□□□ -1.87
PDZRN3Q9UPQ7 snoU13.15-201ENST00000459407 104 ntBASIC3.4□□□□□ -1.87
PDZRN3Q9UPQ7 Y_RNA.648-201ENST00000459455 110 ntBASIC3.4□□□□□ -1.87
PDZRN3Q9UPQ7 RNU7-79P-201ENST00000516082 62 ntBASIC3.4□□□□□ -1.87
PDZRN3Q9UPQ7 RNA5SP282-201ENST00000516355 108 ntBASIC3.4□□□□□ -1.87
PDZRN3Q9UPQ7 RNU7-28P-201ENST00000516759 62 ntBASIC3.4□□□□□ -1.87
PDZRN3Q9UPQ7 MIR4511-201ENST00000582784 87 ntBASIC3.4□□□□□ -1.87
PDZRN3Q9UPQ7 AL627230.6-201ENST00000611129 280 ntBASIC3.4□□□□□ -1.87
PDZRN3Q9UPQ7 ZNF658B-202ENST00000615961 3375 ntBASIC3.4□□□□□ -1.87
PDZRN3Q9UPQ7 AP001362.1-201ENST00000625165 124 ntBASIC3.4□□□□□ -1.87
PDZRN3Q9UPQ7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.4□□□□□ -1.87
PDZRN3Q9UPQ7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.39□□□□□ -1.87
PDZRN3Q9UPQ7 Y_RNA.370-201ENST00000365589 108 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms