Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 MIR6767-201ENST00000637302 66 ntBASIC0.83□□□□□ -2.28
HACD3Q9P035 HSBP1P2-201ENST00000299671 229 ntBASIC0.82□□□□□ -2.28
HACD3Q9P035 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.82□□□□□ -2.28
HACD3Q9P035 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
HACD3Q9P035 Y_RNA.571-201ENST00000384753 98 ntBASIC0.82□□□□□ -2.28
HACD3Q9P035 SNORA79-201ENST00000408376 140 ntBASIC0.82□□□□□ -2.28
HACD3Q9P035 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.82□□□□□ -2.28
HACD3Q9P035 RNU6-998P-201ENST00000515894 101 ntBASIC0.82□□□□□ -2.28
HACD3Q9P035 Y_RNA.797-201ENST00000515977 94 ntBASIC0.82□□□□□ -2.28
HACD3Q9P035 MIR3129-201ENST00000581095 76 ntBASIC0.82□□□□□ -2.28
HACD3Q9P035 MIR96-201ENST00000362288 78 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 Y_RNA.4-201ENST00000362333 112 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 Y_RNA.168-201ENST00000363740 102 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 RNU1-93P-201ENST00000364704 169 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 RNU6-580P-201ENST00000365159 107 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 SNORA2B-201ENST00000384583 137 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 Y_RNA.542-201ENST00000384641 111 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 MT-TN-201ENST00000387400 73 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
HACD3Q9P035 MIR1276-201ENST00000408707 83 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 AC244023.1-201ENST00000426884 112 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 AL035398.1-201ENST00000430869 322 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 FABP5P4-201ENST00000437203 171 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 AL138752.1-201ENST00000452964 351 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 RNU7-96P-201ENST00000459535 64 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 RNA5SP255-201ENST00000516370 107 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 RNU7-53P-201ENST00000516705 60 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 MIR3973-201ENST00000579824 107 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 AL365205.2-201ENST00000594586 68 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 AC242498.1-201ENST00000604134 111 ntBASIC0.81□□□□□ -2.28
HACD3Q9P035 MIR377-201ENST00000362145 69 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 MIR373-201ENST00000362273 69 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 Y_RNA.182-201ENST00000363880 111 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 RNU6-978P-201ENST00000364371 103 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 MIR100-201ENST00000385259 80 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 RNU6-205P-201ENST00000390858 107 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 RNU6-918P-201ENST00000391219 106 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 AC006461.1-201ENST00000412637 326 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 HMGN1P33-201ENST00000432945 451 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.8□□□□□ -2.28
HACD3Q9P035 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 MIR378D2-201ENST00000580636 98 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 MIR5197-201ENST00000583721 112 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 Z97988.1-201ENST00000637697 135 ntBASIC0.8□□□□□ -2.28
HACD3Q9P035 Y_RNA.200-201ENST00000364018 102 ntBASIC0.79□□□□□ -2.28
HACD3Q9P035 RNU6-275P-201ENST00000364910 107 ntBASIC0.79□□□□□ -2.28
HACD3Q9P035 RNU6-1292P-201ENST00000383856 107 ntBASIC0.79□□□□□ -2.28
HACD3Q9P035 RNU4-70P-201ENST00000384579 139 ntBASIC0.79□□□□□ -2.28
HACD3Q9P035 MIR605-201ENST00000385078 83 ntBASIC0.79□□□□□ -2.28
HACD3Q9P035 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
HACD3Q9P035 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.79□□□□□ -2.28
HACD3Q9P035 RNU2-11P-201ENST00000459191 187 ntBASIC0.79□□□□□ -2.28
HACD3Q9P035 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.79□□□□□ -2.28
HACD3Q9P035 AC009779.6-201ENST00000603972 165 ntBASIC0.79□□□□□ -2.28
HACD3Q9P035 MIR6504-201ENST00000613520 61 ntBASIC0.79□□□□□ -2.28
HACD3Q9P035 MIR8070-201ENST00000616510 88 ntBASIC0.79□□□□□ -2.28
HACD3Q9P035 MIR411-201ENST00000362239 96 ntBASIC0.78□□□□□ -2.28
HACD3Q9P035 Y_RNA.412-201ENST00000384001 104 ntBASIC0.78□□□□□ -2.28
HACD3Q9P035 RNU6-643P-201ENST00000384018 107 ntBASIC0.78□□□□□ -2.28
HACD3Q9P035 RNU6-1190P-201ENST00000410811 104 ntBASIC0.78□□□□□ -2.28
HACD3Q9P035 RPS3AP1-201ENST00000413190 320 ntBASIC0.78□□□□□ -2.28
HACD3Q9P035 SNORD116-25-201ENST00000516517 92 ntBASIC0.78□□□□□ -2.28
HACD3Q9P035 AC130289.1-201ENST00000577321 73 ntBASIC0.78□□□□□ -2.28
HACD3Q9P035 MIR4264-201ENST00000583520 66 ntBASIC0.78□□□□□ -2.28
HACD3Q9P035 AP000753.3-201ENST00000604083 169 ntBASIC0.78□□□□□ -2.28
HACD3Q9P035 U6.106-201ENST00000636360 105 ntBASIC0.78□□□□□ -2.28
HACD3Q9P035 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
HACD3Q9P035 Y_RNA.75-201ENST00000362927 97 ntBASIC0.77□□□□□ -2.29
HACD3Q9P035 Y_RNA.83-201ENST00000363005 113 ntBASIC0.77□□□□□ -2.29
HACD3Q9P035 RNU6-1335P-201ENST00000365426 107 ntBASIC0.77□□□□□ -2.29
HACD3Q9P035 MIR548I3-201ENST00000408378 149 ntBASIC0.77□□□□□ -2.29
HACD3Q9P035 Y_RNA.618-201ENST00000410949 107 ntBASIC0.77□□□□□ -2.29
HACD3Q9P035 U7.7-201ENST00000459276 60 ntBASIC0.77□□□□□ -2.29
HACD3Q9P035 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.77□□□□□ -2.29
HACD3Q9P035 MIR342-201ENST00000362212 99 ntBASIC0.76□□□□□ -2.29
HACD3Q9P035 Y_RNA.351-201ENST00000365436 96 ntBASIC0.76□□□□□ -2.29
HACD3Q9P035 RNU6-47P-201ENST00000383866 107 ntBASIC0.76□□□□□ -2.29
HACD3Q9P035 Y_RNA.435-201ENST00000384095 112 ntBASIC0.76□□□□□ -2.29
HACD3Q9P035 Y_RNA.489-201ENST00000384410 101 ntBASIC0.76□□□□□ -2.29
HACD3Q9P035 MIR608-201ENST00000384820 100 ntBASIC0.76□□□□□ -2.29
HACD3Q9P035 SNORD89-201ENST00000390981 114 ntBASIC0.76□□□□□ -2.29
HACD3Q9P035 MIR1827-201ENST00000408549 66 ntBASIC0.76□□□□□ -2.29
HACD3Q9P035 RNU6-994P-201ENST00000410507 111 ntBASIC0.76□□□□□ -2.29
HACD3Q9P035 RNU6-602P-201ENST00000411155 105 ntBASIC0.76□□□□□ -2.29
HACD3Q9P035 snoU13.21-201ENST00000459368 105 ntBASIC0.76□□□□□ -2.29
HACD3Q9P035 RNU6-369P-201ENST00000362515 102 ntBASIC0.75□□□□□ -2.29
HACD3Q9P035 SNORA1.1-201ENST00000364671 133 ntBASIC0.75□□□□□ -2.29
HACD3Q9P035 SNORD38B-201ENST00000384690 67 ntBASIC0.75□□□□□ -2.29
HACD3Q9P035 snosnR66.1-201ENST00000391095 99 ntBASIC0.75□□□□□ -2.29
HACD3Q9P035 SNORA26.6-201ENST00000391256 115 ntBASIC0.75□□□□□ -2.29
HACD3Q9P035 AC067940.1-201ENST00000458411 300 ntBASIC0.75□□□□□ -2.29
HACD3Q9P035 RNU6-1110P-201ENST00000516462 101 ntBASIC0.75□□□□□ -2.29
HACD3Q9P035 MRPS18CP4-201ENST00000535821 231 ntBASIC0.75□□□□□ -2.29
HACD3Q9P035 Z83818.1-201ENST00000603584 150 ntBASIC0.75□□□□□ -2.29
HACD3Q9P035 uc_338.6-201ENST00000613544 171 ntBASIC0.75□□□□□ -2.29
HACD3Q9P035 MIR6740-201ENST00000618268 113 ntBASIC0.75□□□□□ -2.29
HACD3Q9P035 SNORD38B-202ENST00000625943 69 ntBASIC0.75□□□□□ -2.29
HACD3Q9P035 Y_RNA.164-201ENST00000363709 102 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms