Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AL020996.3-201ENST00000606617 222 ntBASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 MIR8055-201ENST00000610739 97 ntBASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 RNU1-133P-201ENST00000364867 167 ntBASIC1.21□□□□□ -2.22
LIN7CQ9NUP9 RNU6-804P-201ENST00000384286 107 ntBASIC1.21□□□□□ -2.22
LIN7CQ9NUP9 Y_RNA.555-201ENST00000384673 110 ntBASIC1.21□□□□□ -2.22
LIN7CQ9NUP9 RNU7-45P-201ENST00000459460 63 ntBASIC1.21□□□□□ -2.22
LIN7CQ9NUP9 RNA5SP404-201ENST00000517118 132 ntBASIC1.21□□□□□ -2.22
LIN7CQ9NUP9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LIN7CQ9NUP9 Y_RNA.8-201ENST00000362353 102 ntBASIC1.2□□□□□ -2.22
LIN7CQ9NUP9 RNU6-60P-201ENST00000364792 103 ntBASIC1.2□□□□□ -2.22
LIN7CQ9NUP9 RNU6-1130P-201ENST00000365434 107 ntBASIC1.2□□□□□ -2.22
LIN7CQ9NUP9 Y_RNA.497-201ENST00000384447 98 ntBASIC1.2□□□□□ -2.22
LIN7CQ9NUP9 RNU6-125P-201ENST00000384505 107 ntBASIC1.2□□□□□ -2.22
LIN7CQ9NUP9 RNA5SP95-201ENST00000410319 137 ntBASIC1.2□□□□□ -2.22
LIN7CQ9NUP9 AC023827.1-201ENST00000569247 97 ntBASIC1.2□□□□□ -2.22
LIN7CQ9NUP9 AC131055.1-201ENST00000584626 316 ntBASIC1.2□□□□□ -2.22
LIN7CQ9NUP9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.2□□□□□ -2.22
LIN7CQ9NUP9 RNU6-151P-201ENST00000364158 107 ntBASIC1.19□□□□□ -2.22
LIN7CQ9NUP9 SNORA1.1-201ENST00000364671 133 ntBASIC1.19□□□□□ -2.22
LIN7CQ9NUP9 RNU6-449P-201ENST00000383914 107 ntBASIC1.19□□□□□ -2.22
LIN7CQ9NUP9 SNORD116-18-201ENST00000383961 92 ntBASIC1.19□□□□□ -2.22
LIN7CQ9NUP9 MIR618-201ENST00000385287 98 ntBASIC1.19□□□□□ -2.22
LIN7CQ9NUP9 RNU6-613P-201ENST00000410412 108 ntBASIC1.19□□□□□ -2.22
LIN7CQ9NUP9 MRPL35P3-201ENST00000421557 364 ntBASIC1.19□□□□□ -2.22
LIN7CQ9NUP9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.19□□□□□ -2.22
LIN7CQ9NUP9 MIR3144-201ENST00000579460 79 ntBASIC1.19□□□□□ -2.22
LIN7CQ9NUP9 Z97988.1-201ENST00000637697 135 ntBASIC1.19□□□□□ -2.22
LIN7CQ9NUP9 RNY1P11-201ENST00000363759 113 ntBASIC1.18□□□□□ -2.22
LIN7CQ9NUP9 RNU4-11P-201ENST00000365287 132 ntBASIC1.18□□□□□ -2.22
LIN7CQ9NUP9 MIR1323-201ENST00000408090 73 ntBASIC1.18□□□□□ -2.22
LIN7CQ9NUP9 AL354695.1-201ENST00000427935 228 ntBASIC1.18□□□□□ -2.22
LIN7CQ9NUP9 MIR4769-201ENST00000584126 77 ntBASIC1.18□□□□□ -2.22
LIN7CQ9NUP9 AP000753.3-201ENST00000604083 169 ntBASIC1.18□□□□□ -2.22
LIN7CQ9NUP9 RNA5SP99-201ENST00000364020 114 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 SNORA2B-201ENST00000384583 137 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 SNORD38B-201ENST00000384690 67 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 MIR19B1-201ENST00000384829 87 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 RNU6-205P-201ENST00000390858 107 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 Y_RNA.580-201ENST00000391004 95 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 SNORA26.6-201ENST00000391256 115 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 RNU6-237P-201ENST00000515985 71 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 AC036111.3-201ENST00000526389 112 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 AC112693.2-201ENST00000556538 232 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 HSPE1P19-201ENST00000603327 295 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 AL512598.1-201ENST00000610158 273 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 MIR7974-201ENST00000615835 79 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 Y_RNA.778-201ENST00000620203 90 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 SNORD38B-202ENST00000625943 69 ntBASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
LIN7CQ9NUP9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 U8.1-201ENST00000362843 134 ntBASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 Y_RNA.180-201ENST00000363867 113 ntBASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 Y_RNA.398-201ENST00000383952 99 ntBASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 RNU6-602P-201ENST00000411155 105 ntBASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 AC244023.1-201ENST00000426884 112 ntBASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 MIR4303-201ENST00000581299 66 ntBASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 MIR4781-201ENST00000585250 76 ntBASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 AC242498.1-201ENST00000604134 111 ntBASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 AL645939.4-201ENST00000604495 135 ntBASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 MIR6717-201ENST00000622747 73 ntBASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
LIN7CQ9NUP9 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
LIN7CQ9NUP9 MT-TN-201ENST00000387400 73 ntBASIC1.15□□□□□ -2.23
LIN7CQ9NUP9 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.23
LIN7CQ9NUP9 Y_RNA.584-201ENST00000391090 114 ntBASIC1.15□□□□□ -2.23
LIN7CQ9NUP9 RNA5SP261-201ENST00000410536 106 ntBASIC1.15□□□□□ -2.23
LIN7CQ9NUP9 RPS3AP1-201ENST00000413190 320 ntBASIC1.15□□□□□ -2.23
LIN7CQ9NUP9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.15□□□□□ -2.23
LIN7CQ9NUP9 RNA5SP236-201ENST00000516169 116 ntBASIC1.15□□□□□ -2.23
LIN7CQ9NUP9 RNA5SP61-201ENST00000516453 100 ntBASIC1.15□□□□□ -2.23
LIN7CQ9NUP9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.15□□□□□ -2.23
LIN7CQ9NUP9 MIR4264-201ENST00000583520 66 ntBASIC1.15□□□□□ -2.23
LIN7CQ9NUP9 AC021753.1-201ENST00000635724 168 ntBASIC1.15□□□□□ -2.23
LIN7CQ9NUP9 ZNF209P-201ENST00000593450 2304 ntBASIC1.14□□□□□ -2.23
LIN7CQ9NUP9 SNORD113.3-201ENST00000364630 78 ntBASIC1.14□□□□□ -2.23
LIN7CQ9NUP9 RNU4-16P-201ENST00000364737 141 ntBASIC1.14□□□□□ -2.23
LIN7CQ9NUP9 RNU6-1319P-201ENST00000390855 104 ntBASIC1.14□□□□□ -2.23
LIN7CQ9NUP9 RNU6-747P-201ENST00000390928 104 ntBASIC1.14□□□□□ -2.23
LIN7CQ9NUP9 RNU6-241P-201ENST00000391148 104 ntBASIC1.14□□□□□ -2.23
LIN7CQ9NUP9 SNORA17.3-201ENST00000391159 129 ntBASIC1.14□□□□□ -2.23
LIN7CQ9NUP9 RNU6-177P-201ENST00000411257 104 ntBASIC1.14□□□□□ -2.23
LIN7CQ9NUP9 SNORD124-201ENST00000459577 104 ntBASIC1.14□□□□□ -2.23
LIN7CQ9NUP9 MTND5P41-201ENST00000517498 206 ntBASIC1.14□□□□□ -2.23
LIN7CQ9NUP9 AC106800.4-201ENST00000614905 153 ntBASIC1.14□□□□□ -2.23
LIN7CQ9NUP9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.14□□□□□ -2.23
LIN7CQ9NUP9 AC021613.1-201ENST00000623880 111 ntBASIC1.14□□□□□ -2.23
LIN7CQ9NUP9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LIN7CQ9NUP9 Y_RNA.168-201ENST00000363740 102 ntBASIC1.13□□□□□ -2.23
LIN7CQ9NUP9 Y_RNA.251-201ENST00000364551 99 ntBASIC1.13□□□□□ -2.23
LIN7CQ9NUP9 RNY1P6-201ENST00000384193 109 ntBASIC1.13□□□□□ -2.23
LIN7CQ9NUP9 RNU6-939P-201ENST00000384634 107 ntBASIC1.13□□□□□ -2.23
LIN7CQ9NUP9 SNORA20-201ENST00000384662 132 ntBASIC1.13□□□□□ -2.23
LIN7CQ9NUP9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.13□□□□□ -2.23
LIN7CQ9NUP9 SNORD111-201ENST00000408139 94 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms