Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RNU6-861P-201ENST00000516745 106 ntBASIC1.22□□□□□ -2.21
DDX4Q9NQI0 MIR3129-201ENST00000581095 76 ntBASIC1.22□□□□□ -2.21
DDX4Q9NQI0 MIR5197-201ENST00000583721 112 ntBASIC1.22□□□□□ -2.21
DDX4Q9NQI0 AC243994.1-201ENST00000618627 109 ntBASIC1.22□□□□□ -2.21
DDX4Q9NQI0 RNU6-682P-201ENST00000363843 106 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 SNORA1-201ENST00000384107 130 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 RNU6-239P-201ENST00000390990 99 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 SNORD77.3-201ENST00000391113 65 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 MIR548J-201ENST00000408833 112 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 RNU2-64P-201ENST00000411315 191 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 snoU13.16-201ENST00000459350 104 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 RNU7-96P-201ENST00000459535 64 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 AC048334.1-201ENST00000477975 159 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 RPS29P24-201ENST00000486345 171 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 RPS26P48-201ENST00000491713 339 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 RNA5SP220-201ENST00000516298 104 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 SNORA18.4-201ENST00000516440 124 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 RNU7-53P-201ENST00000516705 60 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 RNU11-2P-201ENST00000516898 142 ntBASIC1.21□□□□□ -2.22
DDX4Q9NQI0 RNA5SP264-201ENST00000363115 107 ntBASIC1.2□□□□□ -2.22
DDX4Q9NQI0 RNU4-84P-201ENST00000364200 139 ntBASIC1.2□□□□□ -2.22
DDX4Q9NQI0 RNU4-38P-201ENST00000364472 129 ntBASIC1.2□□□□□ -2.22
DDX4Q9NQI0 Y_RNA.354-201ENST00000365448 111 ntBASIC1.2□□□□□ -2.22
DDX4Q9NQI0 Y_RNA.393-201ENST00000383936 102 ntBASIC1.2□□□□□ -2.22
DDX4Q9NQI0 RNU6-42P-201ENST00000384165 107 ntBASIC1.2□□□□□ -2.22
DDX4Q9NQI0 MIR624-201ENST00000385217 97 ntBASIC1.2□□□□□ -2.22
DDX4Q9NQI0 RNU6-1135P-201ENST00000411083 103 ntBASIC1.2□□□□□ -2.22
DDX4Q9NQI0 SNORD36C-201ENST00000516733 66 ntBASIC1.2□□□□□ -2.22
DDX4Q9NQI0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.2□□□□□ -2.22
DDX4Q9NQI0 MIR3973-201ENST00000579824 107 ntBASIC1.2□□□□□ -2.22
DDX4Q9NQI0 MIR3668-201ENST00000582138 75 ntBASIC1.2□□□□□ -2.22
DDX4Q9NQI0 AC098479.1-201ENST00000609225 154 ntBASIC1.2□□□□□ -2.22
DDX4Q9NQI0 MIR6788-201ENST00000618842 66 ntBASIC1.2□□□□□ -2.22
DDX4Q9NQI0 MIR103A2-201ENST00000362154 78 ntBASIC1.19□□□□□ -2.22
DDX4Q9NQI0 Y_RNA.440-201ENST00000384120 114 ntBASIC1.19□□□□□ -2.22
DDX4Q9NQI0 Y_RNA.441-201ENST00000384123 112 ntBASIC1.19□□□□□ -2.22
DDX4Q9NQI0 SNORD12-201ENST00000391002 90 ntBASIC1.19□□□□□ -2.22
DDX4Q9NQI0 MRPL35P3-201ENST00000421557 364 ntBASIC1.19□□□□□ -2.22
DDX4Q9NQI0 RNU7-67P-201ENST00000459003 62 ntBASIC1.19□□□□□ -2.22
DDX4Q9NQI0 MIR3646-201ENST00000578301 84 ntBASIC1.19□□□□□ -2.22
DDX4Q9NQI0 MIR6734-201ENST00000621166 68 ntBASIC1.19□□□□□ -2.22
DDX4Q9NQI0 Y_RNA.270-201ENST00000364693 104 ntBASIC1.18□□□□□ -2.22
DDX4Q9NQI0 Y_RNA.454-201ENST00000384224 113 ntBASIC1.18□□□□□ -2.22
DDX4Q9NQI0 SNORA80D-201ENST00000384488 135 ntBASIC1.18□□□□□ -2.22
DDX4Q9NQI0 MIR570-201ENST00000384917 97 ntBASIC1.18□□□□□ -2.22
DDX4Q9NQI0 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
DDX4Q9NQI0 RNU7-73P-201ENST00000458743 63 ntBASIC1.18□□□□□ -2.22
DDX4Q9NQI0 RNU7-80P-201ENST00000459562 61 ntBASIC1.18□□□□□ -2.22
DDX4Q9NQI0 RNU6-998P-201ENST00000515894 101 ntBASIC1.18□□□□□ -2.22
DDX4Q9NQI0 SNORA70.22-201ENST00000517160 124 ntBASIC1.18□□□□□ -2.22
DDX4Q9NQI0 AP003716.2-201ENST00000528260 108 ntBASIC1.18□□□□□ -2.22
DDX4Q9NQI0 PRELID3BP2-201ENST00000605362 201 ntBASIC1.18□□□□□ -2.22
DDX4Q9NQI0 FTX_2.1-201ENST00000618816 94 ntBASIC1.18□□□□□ -2.22
DDX4Q9NQI0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
DDX4Q9NQI0 SNORA25-201ENST00000384384 134 ntBASIC1.17□□□□□ -2.22
DDX4Q9NQI0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
DDX4Q9NQI0 RNU6-910P-201ENST00000390844 107 ntBASIC1.17□□□□□ -2.22
DDX4Q9NQI0 SNORA75.5-201ENST00000391291 81 ntBASIC1.17□□□□□ -2.22
DDX4Q9NQI0 RNU5E-9P-201ENST00000411164 104 ntBASIC1.17□□□□□ -2.22
DDX4Q9NQI0 AL035398.1-201ENST00000430869 322 ntBASIC1.17□□□□□ -2.22
DDX4Q9NQI0 snoU13.25-201ENST00000458945 104 ntBASIC1.17□□□□□ -2.22
DDX4Q9NQI0 MIR151B-201ENST00000584249 96 ntBASIC1.17□□□□□ -2.22
DDX4Q9NQI0 AL022345.2-201ENST00000606307 135 ntBASIC1.17□□□□□ -2.22
DDX4Q9NQI0 MTND1P7-201ENST00000632801 297 ntBASIC1.17□□□□□ -2.22
DDX4Q9NQI0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
DDX4Q9NQI0 RNU7-121P-201ENST00000516604 62 ntBASIC1.16□□□□□ -2.22
DDX4Q9NQI0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
DDX4Q9NQI0 Y_RNA.494-201ENST00000384432 111 ntBASIC1.15□□□□□ -2.23
DDX4Q9NQI0 Y_RNA.540-201ENST00000384638 111 ntBASIC1.15□□□□□ -2.23
DDX4Q9NQI0 Y_RNA.555-201ENST00000384673 110 ntBASIC1.15□□□□□ -2.23
DDX4Q9NQI0 RNU6-768P-201ENST00000384683 107 ntBASIC1.15□□□□□ -2.23
DDX4Q9NQI0 AL392103.1-201ENST00000447000 198 ntBASIC1.15□□□□□ -2.23
DDX4Q9NQI0 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
DDX4Q9NQI0 SNORD79.1-201ENST00000516069 84 ntBASIC1.15□□□□□ -2.23
DDX4Q9NQI0 MIR2115-201ENST00000516657 100 ntBASIC1.15□□□□□ -2.23
DDX4Q9NQI0 RNU7-70P-201ENST00000516941 66 ntBASIC1.15□□□□□ -2.23
DDX4Q9NQI0 RNU6-958P-201ENST00000516995 106 ntBASIC1.15□□□□□ -2.23
DDX4Q9NQI0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.15□□□□□ -2.23
DDX4Q9NQI0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.15□□□□□ -2.23
DDX4Q9NQI0 DNAJC19P2-201ENST00000593340 302 ntBASIC1.15□□□□□ -2.23
DDX4Q9NQI0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.23
DDX4Q9NQI0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
DDX4Q9NQI0 SNORA25.3-201ENST00000363205 127 ntBASIC1.14□□□□□ -2.23
DDX4Q9NQI0 Y_RNA.272-201ENST00000364696 102 ntBASIC1.14□□□□□ -2.23
DDX4Q9NQI0 RNU6-396P-201ENST00000365369 105 ntBASIC1.14□□□□□ -2.23
DDX4Q9NQI0 Y_RNA.351-201ENST00000365436 96 ntBASIC1.14□□□□□ -2.23
DDX4Q9NQI0 MIR532-201ENST00000385025 91 ntBASIC1.14□□□□□ -2.23
DDX4Q9NQI0 MIR1185-1-201ENST00000408598 86 ntBASIC1.14□□□□□ -2.23
DDX4Q9NQI0 RNA5SP261-201ENST00000410536 106 ntBASIC1.14□□□□□ -2.23
DDX4Q9NQI0 RN7SKP179-201ENST00000516126 217 ntBASIC1.14□□□□□ -2.23
DDX4Q9NQI0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.14□□□□□ -2.23
DDX4Q9NQI0 AC211469.2-201ENST00000605461 205 ntBASIC1.14□□□□□ -2.23
DDX4Q9NQI0 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.14□□□□□ -2.23
DDX4Q9NQI0 SEPT14P17-201ENST00000617978 177 ntBASIC1.14□□□□□ -2.23
DDX4Q9NQI0 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
DDX4Q9NQI0 MIR6844-201ENST00000637122 62 ntBASIC1.14□□□□□ -2.23
DDX4Q9NQI0 MIR302B-201ENST00000362188 73 ntBASIC1.13□□□□□ -2.23
DDX4Q9NQI0 RNU6-818P-201ENST00000364837 108 ntBASIC1.13□□□□□ -2.23
DDX4Q9NQI0 MIR548I3-201ENST00000408378 149 ntBASIC1.13□□□□□ -2.23
DDX4Q9NQI0 RNU2-11P-201ENST00000459191 187 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms