Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 MIR3122-201ENST00000577243 73 ntBASIC1.9□□□□□ -2.11
CCDC113Q9H0I3 MIR3121-201ENST00000579680 77 ntBASIC1.9□□□□□ -2.11
CCDC113Q9H0I3 MIR3910-1-201ENST00000580936 111 ntBASIC1.9□□□□□ -2.11
CCDC113Q9H0I3 MIR4285-201ENST00000581001 85 ntBASIC1.9□□□□□ -2.11
CCDC113Q9H0I3 MIR4769-201ENST00000584126 77 ntBASIC1.9□□□□□ -2.11
CCDC113Q9H0I3 MIR3192-201ENST00000584920 77 ntBASIC1.9□□□□□ -2.11
CCDC113Q9H0I3 RNU6-690P-201ENST00000365242 106 ntBASIC1.89□□□□□ -2.11
CCDC113Q9H0I3 AL133373.1-201ENST00000497098 94 ntBASIC1.89□□□□□ -2.11
CCDC113Q9H0I3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC113Q9H0I3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC113Q9H0I3 RNU1-17P-201ENST00000363022 152 ntBASIC1.88□□□□□ -2.11
CCDC113Q9H0I3 RNU6-508P-201ENST00000363231 103 ntBASIC1.88□□□□□ -2.11
CCDC113Q9H0I3 SNORD48-201ENST00000364953 64 ntBASIC1.88□□□□□ -2.11
CCDC113Q9H0I3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.88□□□□□ -2.11
CCDC113Q9H0I3 AC132825.6-201ENST00000638861 357 ntBASIC1.88□□□□□ -2.11
CCDC113Q9H0I3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC113Q9H0I3 Y_RNA.114-201ENST00000363265 113 ntBASIC1.87□□□□□ -2.11
CCDC113Q9H0I3 RNA5SP99-201ENST00000364020 114 ntBASIC1.87□□□□□ -2.11
CCDC113Q9H0I3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC113Q9H0I3 RNU6-237P-201ENST00000515985 71 ntBASIC1.87□□□□□ -2.11
CCDC113Q9H0I3 MIR3618-201ENST00000580330 88 ntBASIC1.87□□□□□ -2.11
CCDC113Q9H0I3 Y_RNA.294-201ENST00000364916 102 ntBASIC1.86□□□□□ -2.11
CCDC113Q9H0I3 RNA5SP190-201ENST00000365222 118 ntBASIC1.86□□□□□ -2.11
CCDC113Q9H0I3 AC009474.2-201ENST00000451383 136 ntBASIC1.86□□□□□ -2.11
CCDC113Q9H0I3 SNORD13-201ENST00000459299 104 ntBASIC1.86□□□□□ -2.11
CCDC113Q9H0I3 SNORA25.15-201ENST00000516487 89 ntBASIC1.86□□□□□ -2.11
CCDC113Q9H0I3 RNU6-971P-201ENST00000516920 106 ntBASIC1.86□□□□□ -2.11
CCDC113Q9H0I3 AC133485.4-201ENST00000561835 220 ntBASIC1.86□□□□□ -2.11
CCDC113Q9H0I3 AC138907.4-201ENST00000570107 226 ntBASIC1.86□□□□□ -2.11
CCDC113Q9H0I3 MIR8065-201ENST00000620577 100 ntBASIC1.86□□□□□ -2.11
CCDC113Q9H0I3 SNORA25.3-201ENST00000363205 127 ntBASIC1.85□□□□□ -2.11
CCDC113Q9H0I3 RNU6-647P-201ENST00000364243 107 ntBASIC1.85□□□□□ -2.11
CCDC113Q9H0I3 SNORA1.1-201ENST00000364671 133 ntBASIC1.85□□□□□ -2.11
CCDC113Q9H0I3 RNU6-913P-201ENST00000390913 95 ntBASIC1.85□□□□□ -2.11
CCDC113Q9H0I3 RNU6-482P-201ENST00000391068 107 ntBASIC1.85□□□□□ -2.11
CCDC113Q9H0I3 SNORA17.3-201ENST00000391159 129 ntBASIC1.85□□□□□ -2.11
CCDC113Q9H0I3 Y_RNA.651-201ENST00000459380 103 ntBASIC1.85□□□□□ -2.11
CCDC113Q9H0I3 RNU6-240P-201ENST00000516098 97 ntBASIC1.85□□□□□ -2.11
CCDC113Q9H0I3 CYP3A52P-201ENST00000563326 91 ntBASIC1.85□□□□□ -2.11
CCDC113Q9H0I3 MIR548AO-201ENST00000579992 96 ntBASIC1.85□□□□□ -2.11
CCDC113Q9H0I3 RNU6-349P-201ENST00000362402 107 ntBASIC1.84□□□□□ -2.11
CCDC113Q9H0I3 RNU4-16P-201ENST00000364737 141 ntBASIC1.84□□□□□ -2.11
CCDC113Q9H0I3 RNA5SP363-201ENST00000365072 115 ntBASIC1.84□□□□□ -2.11
CCDC113Q9H0I3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.84□□□□□ -2.11
CCDC113Q9H0I3 RNU6-893P-201ENST00000458841 100 ntBASIC1.84□□□□□ -2.11
CCDC113Q9H0I3 RNU7-45P-201ENST00000459460 63 ntBASIC1.84□□□□□ -2.11
CCDC113Q9H0I3 HSPE1P19-201ENST00000603327 295 ntBASIC1.84□□□□□ -2.11
CCDC113Q9H0I3 AL353997.5-201ENST00000618886 171 ntBASIC1.84□□□□□ -2.11
CCDC113Q9H0I3 AC021613.1-201ENST00000623880 111 ntBASIC1.84□□□□□ -2.11
CCDC113Q9H0I3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.84□□□□□ -2.12
CCDC113Q9H0I3 RNU6-1319P-201ENST00000390855 104 ntBASIC1.83□□□□□ -2.12
CCDC113Q9H0I3 RNU6-747P-201ENST00000390928 104 ntBASIC1.83□□□□□ -2.12
CCDC113Q9H0I3 RNU6-241P-201ENST00000391148 104 ntBASIC1.83□□□□□ -2.12
CCDC113Q9H0I3 RNU6-177P-201ENST00000411257 104 ntBASIC1.83□□□□□ -2.12
CCDC113Q9H0I3 RNU1-98P-201ENST00000458992 160 ntBASIC1.83□□□□□ -2.12
CCDC113Q9H0I3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC113Q9H0I3 RNU6-165P-201ENST00000517170 99 ntBASIC1.83□□□□□ -2.12
CCDC113Q9H0I3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC113Q9H0I3 AL020996.3-201ENST00000606617 222 ntBASIC1.83□□□□□ -2.12
CCDC113Q9H0I3 RPS3AP1-201ENST00000413190 320 ntBASIC1.82□□□□□ -2.12
CCDC113Q9H0I3 AL158147.1-201ENST00000443970 75 ntBASIC1.82□□□□□ -2.12
CCDC113Q9H0I3 RNU6-970P-201ENST00000516312 107 ntBASIC1.82□□□□□ -2.12
CCDC113Q9H0I3 MIR502-201ENST00000606349 86 ntBASIC1.82□□□□□ -2.12
CCDC113Q9H0I3 MIR6717-201ENST00000622747 73 ntBASIC1.82□□□□□ -2.12
CCDC113Q9H0I3 MIR103A2-201ENST00000362154 78 ntBASIC1.81□□□□□ -2.12
CCDC113Q9H0I3 RNU6-235P-201ENST00000362644 107 ntBASIC1.81□□□□□ -2.12
CCDC113Q9H0I3 Y_RNA.354-201ENST00000365448 111 ntBASIC1.81□□□□□ -2.12
CCDC113Q9H0I3 RNU6-81P-201ENST00000365608 104 ntBASIC1.81□□□□□ -2.12
CCDC113Q9H0I3 HMGN1P33-201ENST00000432945 451 ntBASIC1.81□□□□□ -2.12
CCDC113Q9H0I3 AC245047.7-201ENST00000440265 293 ntBASIC1.81□□□□□ -2.12
CCDC113Q9H0I3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC113Q9H0I3 AC021443.1-201ENST00000604478 211 ntBASIC1.81□□□□□ -2.12
CCDC113Q9H0I3 MIR8055-201ENST00000610739 97 ntBASIC1.81□□□□□ -2.12
CCDC113Q9H0I3 AL137067.1-201ENST00000615933 120 ntBASIC1.81□□□□□ -2.12
CCDC113Q9H0I3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC113Q9H0I3 RNU6-396P-201ENST00000365369 105 ntBASIC1.8□□□□□ -2.12
CCDC113Q9H0I3 RNU6-959P-201ENST00000384671 107 ntBASIC1.8□□□□□ -2.12
CCDC113Q9H0I3 SNORD38B-201ENST00000384690 67 ntBASIC1.8□□□□□ -2.12
CCDC113Q9H0I3 SNORD38B-202ENST00000625943 69 ntBASIC1.8□□□□□ -2.12
CCDC113Q9H0I3 RNA5SP264-201ENST00000363115 107 ntBASIC1.79□□□□□ -2.12
CCDC113Q9H0I3 Y_RNA.366-201ENST00000365540 102 ntBASIC1.79□□□□□ -2.12
CCDC113Q9H0I3 RNU6-1190P-201ENST00000410811 104 ntBASIC1.79□□□□□ -2.12
CCDC113Q9H0I3 AL022718.1-201ENST00000412004 84 ntBASIC1.79□□□□□ -2.12
CCDC113Q9H0I3 AC048334.1-201ENST00000477975 159 ntBASIC1.79□□□□□ -2.12
CCDC113Q9H0I3 RNU6-1061P-201ENST00000516530 99 ntBASIC1.79□□□□□ -2.12
CCDC113Q9H0I3 MIR4305-201ENST00000583252 102 ntBASIC1.79□□□□□ -2.12
CCDC113Q9H0I3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CCDC113Q9H0I3 RNU6-80P-201ENST00000384195 107 ntBASIC1.78□□□□□ -2.12
CCDC113Q9H0I3 RNU6-997P-201ENST00000384725 107 ntBASIC1.78□□□□□ -2.12
CCDC113Q9H0I3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.78□□□□□ -2.12
CCDC113Q9H0I3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.78□□□□□ -2.12
CCDC113Q9H0I3 RN7SKP19-201ENST00000516016 252 ntBASIC1.78□□□□□ -2.12
CCDC113Q9H0I3 SNORA31.2-201ENST00000516019 134 ntBASIC1.78□□□□□ -2.12
CCDC113Q9H0I3 SNORA31.4-201ENST00000516049 129 ntBASIC1.78□□□□□ -2.12
CCDC113Q9H0I3 AC108081.1-201ENST00000604358 221 ntBASIC1.78□□□□□ -2.12
CCDC113Q9H0I3 Z97988.1-201ENST00000637697 135 ntBASIC1.78□□□□□ -2.12
CCDC113Q9H0I3 SNORA22.1-201ENST00000362701 134 ntBASIC1.77□□□□□ -2.13
CCDC113Q9H0I3 RNU6-1117P-201ENST00000384525 104 ntBASIC1.77□□□□□ -2.13
CCDC113Q9H0I3 AL606753.1-201ENST00000427435 87 ntBASIC1.77□□□□□ -2.13
CCDC113Q9H0I3 AL603825.1-201ENST00000438481 80 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms