Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RNU6-1336P-201ENST00000383886 109 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 SNORA25-201ENST00000384384 134 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 MIR15B-201ENST00000385045 98 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 RNU6-910P-201ENST00000390844 107 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 RNU2-70P-201ENST00000410718 179 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.644-201ENST00000459006 113 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.797-201ENST00000515977 94 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.674-201ENST00000516362 113 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 SNORA18.4-201ENST00000516440 124 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 RNU7-43P-201ENST00000516554 64 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 RNU6-504P-201ENST00000516568 104 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 MRPS18CP4-201ENST00000535821 231 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 MIR548AO-201ENST00000579992 96 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 AL357312.1-201ENST00000603879 298 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 AL022345.2-201ENST00000606307 135 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 MIR4791-201ENST00000607666 84 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.75-201ENST00000362927 97 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 RNA5SP264-201ENST00000363115 107 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.233-201ENST00000364407 101 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.257-201ENST00000364596 102 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 RNU6-200P-201ENST00000364743 107 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 RNU6-275P-201ENST00000364910 107 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.435-201ENST00000384095 112 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 RNU4-70P-201ENST00000384579 139 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.552-201ENST00000384665 112 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 MIR193B-201ENST00000384907 83 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 MIR100-201ENST00000385259 80 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 SNORA75.2-201ENST00000391138 150 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 SNORA75.3-201ENST00000391231 150 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 AC006461.1-201ENST00000412637 326 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 AC090844.1-201ENST00000422019 156 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 AL392103.1-201ENST00000447000 198 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 AP003484.1-201ENST00000530974 250 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 MIR1273G-201ENST00000577677 100 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 MIR3129-201ENST00000581095 76 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 AC013244.2-201ENST00000603396 103 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 MTND1P7-201ENST00000632801 297 ntBASIC0.68□□□□□ -2.3
RSPO3Q9BXY4 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 RNU6-1020P-201ENST00000363684 107 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 RNY1P11-201ENST00000363759 113 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.241-201ENST00000364470 117 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 SNORA24-201ENST00000384096 131 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 RNU5E-9P-201ENST00000411164 104 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 AC074198.2-201ENST00000508153 258 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 SNORD79.1-201ENST00000516069 84 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 ACA64.5-201ENST00000516207 127 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 MIR378D2-201ENST00000580636 98 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 Z83818.1-201ENST00000603584 150 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 AC090425.1-201ENST00000610007 140 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 AC134878.1-201ENST00000619901 243 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 MIR4251-201ENST00000635819 61 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 AC010487.4-201ENST00000637027 61 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 AC008163.1-202ENST00000636004 2889 ntBASIC0.67□□□□□ -2.3
RSPO3Q9BXY4 RNU6-682P-201ENST00000363843 106 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 RNU6-654P-201ENST00000364373 107 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.242-201ENST00000364473 110 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.440-201ENST00000384120 114 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.515-201ENST00000384535 112 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.537-201ENST00000384626 109 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 RNU6-913P-201ENST00000390913 95 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 RNU2-64P-201ENST00000411315 191 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 SEPT7P4-201ENST00000437076 306 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 AC002429.1-201ENST00000437672 148 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 AL138752.1-201ENST00000452964 351 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 RPL39P39-201ENST00000455840 151 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 RNU6-861P-201ENST00000516745 106 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 RNU6-958P-201ENST00000516995 106 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 SNORA70.22-201ENST00000517160 124 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 AC004792.1-201ENST00000614523 137 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 AC243994.1-201ENST00000618627 109 ntBASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
RSPO3Q9BXY4 SNORD115-34-201ENST00000362441 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-12-201ENST00000362583 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-29-201ENST00000362834 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-9-201ENST00000362912 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-21-201ENST00000362963 81 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-14-201ENST00000363090 81 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-13-201ENST00000363358 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-41-201ENST00000363608 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-11-201ENST00000363616 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-5-201ENST00000363633 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-39-201ENST00000363694 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-4-201ENST00000363810 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-16-201ENST00000363887 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-6-201ENST00000363942 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-42-201ENST00000364273 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-15-201ENST00000364809 81 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 RNU6-818P-201ENST00000364837 108 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-1-201ENST00000364961 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-26-201ENST00000365067 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-10-201ENST00000365073 81 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 RNU6-1318P-201ENST00000365389 103 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-43-201ENST00000365503 82 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms