Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 RNA5SP327-201ENST00000362494 101 ntBASIC1.14□□□□□ -2.23
RTP3Q9BQQ7 Y_RNA.270-201ENST00000364693 104 ntBASIC1.14□□□□□ -2.23
RTP3Q9BQQ7 SNORA70.7-201ENST00000384159 133 ntBASIC1.14□□□□□ -2.23
RTP3Q9BQQ7 AC245047.7-201ENST00000440265 293 ntBASIC1.14□□□□□ -2.23
RTP3Q9BQQ7 RPS26P48-201ENST00000491713 339 ntBASIC1.14□□□□□ -2.23
RTP3Q9BQQ7 AC107027.2-201ENST00000512197 115 ntBASIC1.14□□□□□ -2.23
RTP3Q9BQQ7 RNU4-84P-201ENST00000364200 139 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 RNU1-133P-201ENST00000364867 167 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 Y_RNA.337-201ENST00000365312 102 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 RNU6-1336P-201ENST00000383886 109 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 RNU6-1189P-201ENST00000383958 107 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 Y_RNA.410-201ENST00000383992 113 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 Y_RNA.542-201ENST00000384641 111 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 RNU6-1067P-201ENST00000384752 107 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 RNU6-239P-201ENST00000390990 99 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 SNORA40.5-201ENST00000391061 128 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 AC107297.1-201ENST00000459991 176 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 AL133373.1-201ENST00000497098 94 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 SNORA31.2-201ENST00000516019 134 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 SNORD114-21-201ENST00000606412 72 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 MIR4791-201ENST00000607666 84 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 AC098479.1-201ENST00000609225 154 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 AC008133.2-201ENST00000624540 351 ntBASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.13□□□□□ -2.23
RTP3Q9BQQ7 SNORA25.7-201ENST00000364375 127 ntBASIC1.12□□□□□ -2.23
RTP3Q9BQQ7 Y_RNA.441-201ENST00000384123 112 ntBASIC1.12□□□□□ -2.23
RTP3Q9BQQ7 RNU6-886P-201ENST00000384319 105 ntBASIC1.12□□□□□ -2.23
RTP3Q9BQQ7 RNU6-768P-201ENST00000384683 107 ntBASIC1.12□□□□□ -2.23
RTP3Q9BQQ7 RNU6-1135P-201ENST00000411083 103 ntBASIC1.12□□□□□ -2.23
RTP3Q9BQQ7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.12□□□□□ -2.23
RTP3Q9BQQ7 SNORA18.4-201ENST00000516440 124 ntBASIC1.12□□□□□ -2.23
RTP3Q9BQQ7 AL365205.2-201ENST00000594586 68 ntBASIC1.12□□□□□ -2.23
RTP3Q9BQQ7 PRELID3BP2-201ENST00000605362 201 ntBASIC1.12□□□□□ -2.23
RTP3Q9BQQ7 AC104465.1-201ENST00000611365 139 ntBASIC1.12□□□□□ -2.23
RTP3Q9BQQ7 MIR376A2-201ENST00000636782 80 ntBASIC1.12□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-34-201ENST00000362441 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-12-201ENST00000362583 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-29-201ENST00000362834 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-9-201ENST00000362912 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-21-201ENST00000362963 81 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-14-201ENST00000363090 81 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORA25.3-201ENST00000363205 127 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-13-201ENST00000363358 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-41-201ENST00000363608 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-11-201ENST00000363616 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-5-201ENST00000363633 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-39-201ENST00000363694 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-4-201ENST00000363810 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-16-201ENST00000363887 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-6-201ENST00000363942 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-42-201ENST00000364273 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-15-201ENST00000364809 81 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-1-201ENST00000364961 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-26-201ENST00000365067 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-10-201ENST00000365073 81 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-43-201ENST00000365503 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-36-201ENST00000365629 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 RNU6-1292P-201ENST00000383856 107 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORA27-201ENST00000384323 126 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 Y_RNA.537-201ENST00000384626 109 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 PCNPP3-201ENST00000393579 471 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 RNU7-67P-201ENST00000459003 62 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 RNU2-13P-201ENST00000515909 113 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 RNU7-121P-201ENST00000516604 62 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 CYP3A137P-201ENST00000562436 69 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 SNORD115-40-201ENST00000606510 82 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 AL020996.3-201ENST00000606617 222 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 MIR6857-201ENST00000613267 93 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 AC243994.1-201ENST00000618627 109 ntBASIC1.11□□□□□ -2.23
RTP3Q9BQQ7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
RTP3Q9BQQ7 Y_RNA.272-201ENST00000364696 102 ntBASIC1.1□□□□□ -2.23
RTP3Q9BQQ7 RNU6-597P-201ENST00000365620 102 ntBASIC1.1□□□□□ -2.23
RTP3Q9BQQ7 Y_RNA.440-201ENST00000384120 114 ntBASIC1.1□□□□□ -2.23
RTP3Q9BQQ7 SNORA51.10-201ENST00000384418 136 ntBASIC1.1□□□□□ -2.23
RTP3Q9BQQ7 SNORA31.4-201ENST00000516049 129 ntBASIC1.1□□□□□ -2.23
RTP3Q9BQQ7 RN7SKP179-201ENST00000516126 217 ntBASIC1.1□□□□□ -2.23
RTP3Q9BQQ7 RNU6-958P-201ENST00000516995 106 ntBASIC1.1□□□□□ -2.23
RTP3Q9BQQ7 AP003716.2-201ENST00000528260 108 ntBASIC1.1□□□□□ -2.23
RTP3Q9BQQ7 MTND1P7-201ENST00000632801 297 ntBASIC1.1□□□□□ -2.23
RTP3Q9BQQ7 MIR4251-201ENST00000635819 61 ntBASIC1.1□□□□□ -2.23
RTP3Q9BQQ7 MIR6844-201ENST00000637122 62 ntBASIC1.1□□□□□ -2.23
RTP3Q9BQQ7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.09□□□□□ -2.23
RTP3Q9BQQ7 MIR373-201ENST00000362273 69 ntBASIC1.09□□□□□ -2.23
RTP3Q9BQQ7 RNU6-1082P-201ENST00000364574 107 ntBASIC1.09□□□□□ -2.23
RTP3Q9BQQ7 RNU6-910P-201ENST00000390844 107 ntBASIC1.09□□□□□ -2.23
RTP3Q9BQQ7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.09□□□□□ -2.23
RTP3Q9BQQ7 RNU6-394P-201ENST00000410735 107 ntBASIC1.09□□□□□ -2.23
RTP3Q9BQQ7 RNA5SP127-201ENST00000411051 133 ntBASIC1.09□□□□□ -2.23
RTP3Q9BQQ7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.09□□□□□ -2.23
RTP3Q9BQQ7 AL022345.2-201ENST00000606307 135 ntBASIC1.09□□□□□ -2.23
RTP3Q9BQQ7 MIR3658-201ENST00000636291 56 ntBASIC1.09□□□□□ -2.23
RTP3Q9BQQ7 MIR342-201ENST00000362212 99 ntBASIC1.08□□□□□ -2.24
RTP3Q9BQQ7 RNA5SP264-201ENST00000363115 107 ntBASIC1.08□□□□□ -2.24
RTP3Q9BQQ7 RNA5SP48-201ENST00000363969 126 ntBASIC1.08□□□□□ -2.24
RTP3Q9BQQ7 RNU4-38P-201ENST00000364472 129 ntBASIC1.08□□□□□ -2.24
RTP3Q9BQQ7 Y_RNA.351-201ENST00000365436 96 ntBASIC1.08□□□□□ -2.24
RTP3Q9BQQ7 Y_RNA.555-201ENST00000384673 110 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms