Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AC113410.1-201ENST00000505029 247 ntBASIC0.76□□□□□ -2.29
NDNQ99608 RNU6-998P-201ENST00000515894 101 ntBASIC0.76□□□□□ -2.29
NDNQ99608 RNU6-561P-201ENST00000516222 102 ntBASIC0.76□□□□□ -2.29
NDNQ99608 MIR1-1-201ENST00000362147 71 ntBASIC0.75□□□□□ -2.29
NDNQ99608 Y_RNA.65-201ENST00000362846 100 ntBASIC0.75□□□□□ -2.29
NDNQ99608 Y_RNA.193-201ENST00000363979 102 ntBASIC0.75□□□□□ -2.29
NDNQ99608 Y_RNA.269-201ENST00000364685 89 ntBASIC0.75□□□□□ -2.29
NDNQ99608 RNU6-702P-201ENST00000364982 107 ntBASIC0.75□□□□□ -2.29
NDNQ99608 Y_RNA.308-201ENST00000365043 101 ntBASIC0.75□□□□□ -2.29
NDNQ99608 SNORA1-201ENST00000384107 130 ntBASIC0.75□□□□□ -2.29
NDNQ99608 RNU6-196P-201ENST00000384315 107 ntBASIC0.75□□□□□ -2.29
NDNQ99608 Y_RNA.539-201ENST00000384635 107 ntBASIC0.75□□□□□ -2.29
NDNQ99608 RNU6-913P-201ENST00000390913 95 ntBASIC0.75□□□□□ -2.29
NDNQ99608 RNU6-578P-201ENST00000390980 103 ntBASIC0.75□□□□□ -2.29
NDNQ99608 MIR1827-201ENST00000408549 66 ntBASIC0.75□□□□□ -2.29
NDNQ99608 Y_RNA.618-201ENST00000410949 107 ntBASIC0.75□□□□□ -2.29
NDNQ99608 AC244023.1-201ENST00000426884 112 ntBASIC0.75□□□□□ -2.29
NDNQ99608 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.75□□□□□ -2.29
NDNQ99608 AL121914.1-201ENST00000450188 156 ntBASIC0.75□□□□□ -2.29
NDNQ99608 RNU6-1023P-201ENST00000516137 106 ntBASIC0.75□□□□□ -2.29
NDNQ99608 RNU4-71P-201ENST00000516258 113 ntBASIC0.75□□□□□ -2.29
NDNQ99608 Y_RNA.673-201ENST00000516306 88 ntBASIC0.75□□□□□ -2.29
NDNQ99608 AC242498.1-201ENST00000604134 111 ntBASIC0.75□□□□□ -2.29
NDNQ99608 AL353765.1-201ENST00000605514 183 ntBASIC0.75□□□□□ -2.29
NDNQ99608 Y_RNA.238-201ENST00000364441 102 ntBASIC0.74□□□□□ -2.29
NDNQ99608 SNORA1.1-201ENST00000364671 133 ntBASIC0.74□□□□□ -2.29
NDNQ99608 Y_RNA.452-201ENST00000384202 108 ntBASIC0.74□□□□□ -2.29
NDNQ99608 Y_RNA.477-201ENST00000384352 108 ntBASIC0.74□□□□□ -2.29
NDNQ99608 Y_RNA.626-201ENST00000411288 95 ntBASIC0.74□□□□□ -2.29
NDNQ99608 AC006461.1-201ENST00000412637 326 ntBASIC0.74□□□□□ -2.29
NDNQ99608 RNU2-11P-201ENST00000459191 187 ntBASIC0.74□□□□□ -2.29
NDNQ99608 RNY3P16-201ENST00000516338 101 ntBASIC0.74□□□□□ -2.29
NDNQ99608 SNORD116-25-201ENST00000516517 92 ntBASIC0.74□□□□□ -2.29
NDNQ99608 MIR3128-201ENST00000581957 66 ntBASIC0.74□□□□□ -2.29
NDNQ99608 MIR4503-201ENST00000582187 83 ntBASIC0.74□□□□□ -2.29
NDNQ99608 AL365205.2-201ENST00000594586 68 ntBASIC0.74□□□□□ -2.29
NDNQ99608 AL353621.2-201ENST00000605340 133 ntBASIC0.74□□□□□ -2.29
NDNQ99608 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
NDNQ99608 AC099654.10-201ENST00000640395 161 ntBASIC0.74□□□□□ -2.29
NDNQ99608 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
NDNQ99608 SNORA20.1-201ENST00000364790 130 ntBASIC0.73□□□□□ -2.29
NDNQ99608 MIR100-201ENST00000385259 80 ntBASIC0.73□□□□□ -2.29
NDNQ99608 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.73□□□□□ -2.29
NDNQ99608 RNU6-205P-201ENST00000390858 107 ntBASIC0.73□□□□□ -2.29
NDNQ99608 AL078595.1-201ENST00000404458 226 ntBASIC0.73□□□□□ -2.29
NDNQ99608 AC090844.1-201ENST00000422019 156 ntBASIC0.73□□□□□ -2.29
NDNQ99608 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
NDNQ99608 RNU7-80P-201ENST00000459562 61 ntBASIC0.73□□□□□ -2.29
NDNQ99608 Y_RNA.797-201ENST00000515977 94 ntBASIC0.73□□□□□ -2.29
NDNQ99608 MIR378D2-201ENST00000580636 98 ntBASIC0.73□□□□□ -2.29
NDNQ99608 7SK.10-201ENST00000621414 298 ntBASIC0.73□□□□□ -2.29
NDNQ99608 SNORA25.9-201ENST00000365087 128 ntBASIC0.72□□□□□ -2.29
NDNQ99608 RNU6-934P-201ENST00000365154 107 ntBASIC0.72□□□□□ -2.29
NDNQ99608 Y_RNA.351-201ENST00000365436 96 ntBASIC0.72□□□□□ -2.29
NDNQ99608 Y_RNA.454-201ENST00000384224 113 ntBASIC0.72□□□□□ -2.29
NDNQ99608 MIR548I3-201ENST00000408378 149 ntBASIC0.72□□□□□ -2.29
NDNQ99608 RNA5SP261-201ENST00000410536 106 ntBASIC0.72□□□□□ -2.29
NDNQ99608 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
NDNQ99608 MIR3129-201ENST00000581095 76 ntBASIC0.72□□□□□ -2.29
NDNQ99608 MIR5197-201ENST00000583721 112 ntBASIC0.72□□□□□ -2.29
NDNQ99608 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
NDNQ99608 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
NDNQ99608 MIR302B-201ENST00000362188 73 ntBASIC0.71□□□□□ -2.3
NDNQ99608 RNY1-201ENST00000364228 113 ntBASIC0.71□□□□□ -2.3
NDNQ99608 Y_RNA.354-201ENST00000365448 111 ntBASIC0.71□□□□□ -2.3
NDNQ99608 RNU6-463P-201ENST00000384340 107 ntBASIC0.71□□□□□ -2.3
NDNQ99608 Y_RNA.571-201ENST00000384753 98 ntBASIC0.71□□□□□ -2.3
NDNQ99608 RNU6-493P-201ENST00000391321 108 ntBASIC0.71□□□□□ -2.3
NDNQ99608 RPS26P5-201ENST00000418544 335 ntBASIC0.71□□□□□ -2.3
NDNQ99608 AL138752.1-201ENST00000452964 351 ntBASIC0.71□□□□□ -2.3
NDNQ99608 PSMC1P5-201ENST00000512850 177 ntBASIC0.71□□□□□ -2.3
NDNQ99608 MIR3149-201ENST00000584629 83 ntBASIC0.71□□□□□ -2.3
NDNQ99608 RNU2-4P-201ENST00000606190 192 ntBASIC0.71□□□□□ -2.3
NDNQ99608 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
NDNQ99608 Y_RNA.447-201ENST00000384184 113 ntBASIC0.7□□□□□ -2.3
NDNQ99608 RNU6-110P-201ENST00000384508 104 ntBASIC0.7□□□□□ -2.3
NDNQ99608 RNU4-70P-201ENST00000384579 139 ntBASIC0.7□□□□□ -2.3
NDNQ99608 MIR499A-201ENST00000384903 122 ntBASIC0.7□□□□□ -2.3
NDNQ99608 SNORD105-201ENST00000386910 85 ntBASIC0.7□□□□□ -2.3
NDNQ99608 RNU6-602P-201ENST00000411155 105 ntBASIC0.7□□□□□ -2.3
NDNQ99608 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
NDNQ99608 RNU7-62P-201ENST00000458856 62 ntBASIC0.7□□□□□ -2.3
NDNQ99608 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.7□□□□□ -2.3
NDNQ99608 Y_RNA.191-201ENST00000363972 113 ntBASIC0.69□□□□□ -2.3
NDNQ99608 RNU6-978P-201ENST00000364371 103 ntBASIC0.69□□□□□ -2.3
NDNQ99608 SNORD114-22-201ENST00000365423 72 ntBASIC0.69□□□□□ -2.3
NDNQ99608 RNU6-1335P-201ENST00000365426 107 ntBASIC0.69□□□□□ -2.3
NDNQ99608 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.69□□□□□ -2.3
NDNQ99608 SNORD99-201ENST00000408612 74 ntBASIC0.69□□□□□ -2.3
NDNQ99608 MIR18B-201ENST00000454574 71 ntBASIC0.69□□□□□ -2.3
NDNQ99608 AC004817.2-201ENST00000561794 651 ntBASIC0.69□□□□□ -2.3
NDNQ99608 MIR4308-201ENST00000580634 81 ntBASIC0.69□□□□□ -2.3
NDNQ99608 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.69□□□□□ -2.3
NDNQ99608 AC104465.1-201ENST00000611365 139 ntBASIC0.69□□□□□ -2.3
NDNQ99608 MIR342-201ENST00000362212 99 ntBASIC0.68□□□□□ -2.3
NDNQ99608 Y_RNA.60-201ENST00000362831 98 ntBASIC0.68□□□□□ -2.3
NDNQ99608 Y_RNA.182-201ENST00000363880 111 ntBASIC0.68□□□□□ -2.3
NDNQ99608 RNU6-923P-201ENST00000364753 107 ntBASIC0.68□□□□□ -2.3
NDNQ99608 RNU6-275P-201ENST00000364910 107 ntBASIC0.68□□□□□ -2.3
NDNQ99608 HMGN1P33-201ENST00000432945 451 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms