Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 U2.14-201ENST00000615943 113 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 Y_RNA.115-201ENST00000363272 98 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 RNU6-238P-201ENST00000363313 106 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 RNU6-580P-201ENST00000365159 107 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 SNORA26.6-201ENST00000391256 115 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 MIR548I3-201ENST00000408378 149 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 SNORD123-201ENST00000459473 70 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 RNU6-958P-201ENST00000516995 106 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 MIR4643-201ENST00000577473 78 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 MIR4711-201ENST00000578274 70 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
SCN2AQ99250 Y_RNA.277-201ENST00000364754 102 ntBASIC0.53□□□□□ -2.32
SCN2AQ99250 Y_RNA.410-201ENST00000383992 113 ntBASIC0.53□□□□□ -2.32
SCN2AQ99250 MIR1827-201ENST00000408549 66 ntBASIC0.53□□□□□ -2.32
SCN2AQ99250 Y_RNA.293-201ENST00000364908 93 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 RNU6-1335P-201ENST00000365426 107 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 Y_RNA.376-201ENST00000365638 108 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 RNU6-1045P-201ENST00000516321 107 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 RNA5SP153-201ENST00000516498 76 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 RNU6-448P-201ENST00000517052 107 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 MIR548AO-201ENST00000579992 96 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 AL442067.1-201ENST00000613261 223 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 AL662814.1-201ENST00000617364 121 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 MIR367-201ENST00000362299 68 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 RNU6-1309P-201ENST00000363305 108 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 Y_RNA.241-201ENST00000364470 117 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 RNU6-740P-201ENST00000364734 105 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 MT-TF-201ENST00000387314 71 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 RNU2-64P-201ENST00000411315 191 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.52□□□□□ -2.33
SCN2AQ99250 RNU7-56P-201ENST00000458744 62 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 RNU4-71P-201ENST00000516258 113 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 AC023827.1-201ENST00000569247 97 ntBASIC0.52□□□□□ -2.33
SCN2AQ99250 MIR342-201ENST00000362212 99 ntBASIC0.51□□□□□ -2.33
SCN2AQ99250 Y_RNA.91-201ENST00000363042 107 ntBASIC0.51□□□□□ -2.33
SCN2AQ99250 RNU6-653P-201ENST00000363074 106 ntBASIC0.51□□□□□ -2.33
SCN2AQ99250 MIR508-201ENST00000384857 115 ntBASIC0.51□□□□□ -2.33
SCN2AQ99250 MIR616-201ENST00000385293 97 ntBASIC0.51□□□□□ -2.33
SCN2AQ99250 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.51□□□□□ -2.33
SCN2AQ99250 MIR548F4-201ENST00000408515 105 ntBASIC0.51□□□□□ -2.33
SCN2AQ99250 RNU7-62P-201ENST00000458856 62 ntBASIC0.51□□□□□ -2.33
SCN2AQ99250 RNU6-504P-201ENST00000516568 104 ntBASIC0.51□□□□□ -2.33
SCN2AQ99250 MIR3152-201ENST00000579801 74 ntBASIC0.51□□□□□ -2.33
SCN2AQ99250 Z83818.1-201ENST00000603584 150 ntBASIC0.51□□□□□ -2.33
SCN2AQ99250 U6.104-201ENST00000637979 90 ntBASIC0.51□□□□□ -2.33
SCN2AQ99250 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
SCN2AQ99250 SNORD27-201ENST00000363981 72 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 RNU6-694P-201ENST00000364071 147 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 Y_RNA.351-201ENST00000365436 96 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 RNU6-326P-201ENST00000365480 107 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 Y_RNA.547-201ENST00000384654 119 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 MIR626-201ENST00000385032 94 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 RPS26P5-201ENST00000418544 335 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 MTCYBP9-201ENST00000431021 303 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 SNRPGP8-201ENST00000454064 226 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 RNA5SP476-201ENST00000516613 103 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 MIR4282-201ENST00000583613 67 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 Y_RNA.812-201ENST00000610788 101 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 Y_RNA.784-201ENST00000613803 101 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 Y_RNA.787-201ENST00000616522 101 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 Y_RNA.780-201ENST00000617336 101 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 Y_RNA.801-201ENST00000619005 101 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 AC243829.3-201ENST00000622177 108 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 MIR6516-201ENST00000630554 81 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 Y_RNA.486-201ENST00000384398 107 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 MIR520F-201ENST00000384824 87 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 MIR573-201ENST00000384964 99 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 AC244023.1-201ENST00000426884 112 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 RNU7-96P-201ENST00000459535 64 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 AC036111.3-201ENST00000526389 112 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 AC242498.1-201ENST00000604134 111 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 MIR8087-201ENST00000612745 78 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 MTND1P7-201ENST00000632801 297 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 Z97988.1-201ENST00000637697 135 ntBASIC0.5□□□□□ -2.33
SCN2AQ99250 MIR302B-201ENST00000362188 73 ntBASIC0.49□□□□□ -2.33
SCN2AQ99250 Y_RNA.54-201ENST00000362766 105 ntBASIC0.49□□□□□ -2.33
SCN2AQ99250 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
SCN2AQ99250 Y_RNA.539-201ENST00000384635 107 ntBASIC0.49□□□□□ -2.33
SCN2AQ99250 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.49□□□□□ -2.33
SCN2AQ99250 MIR18B-201ENST00000454574 71 ntBASIC0.49□□□□□ -2.33
SCN2AQ99250 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.49□□□□□ -2.33
SCN2AQ99250 AC113410.1-201ENST00000505029 247 ntBASIC0.49□□□□□ -2.33
SCN2AQ99250 AL117187.1-201ENST00000555482 181 ntBASIC0.49□□□□□ -2.33
SCN2AQ99250 AC004817.2-201ENST00000561794 651 ntBASIC0.49□□□□□ -2.33
SCN2AQ99250 AC012433.1-201ENST00000588916 398 ntBASIC0.49□□□□□ -2.33
SCN2AQ99250 MIR8062-201ENST00000621515 85 ntBASIC0.49□□□□□ -2.33
SCN2AQ99250 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
SCN2AQ99250 Y_RNA.23-201ENST00000362496 106 ntBASIC0.48□□□□□ -2.33
SCN2AQ99250 Y_RNA.24-201ENST00000362508 103 ntBASIC0.48□□□□□ -2.33
SCN2AQ99250 Y_RNA.193-201ENST00000363979 102 ntBASIC0.48□□□□□ -2.33
SCN2AQ99250 RNU6-938P-201ENST00000411285 103 ntBASIC0.48□□□□□ -2.33
SCN2AQ99250 SNORD127-201ENST00000458892 86 ntBASIC0.48□□□□□ -2.33
SCN2AQ99250 Y_RNA.42-201ENST00000362660 108 ntBASIC0.48□□□□□ -2.33
SCN2AQ99250 SNORD61-201ENST00000384252 73 ntBASIC0.48□□□□□ -2.33
SCN2AQ99250 SNORA51.10-201ENST00000384418 136 ntBASIC0.48□□□□□ -2.33
SCN2AQ99250 Y_RNA.574-201ENST00000384766 95 ntBASIC0.48□□□□□ -2.33
SCN2AQ99250 RNU7-102P-201ENST00000458948 62 ntBASIC0.48□□□□□ -2.33
SCN2AQ99250 Y_RNA.681-201ENST00000516445 113 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 217.2 ms