Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MIR548I3-201ENST00000408378 149 ntBASIC0.97□□□□□ -2.25
NR1H4Q96RI1 RPS3AP1-201ENST00000413190 320 ntBASIC0.97□□□□□ -2.25
NR1H4Q96RI1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.97□□□□□ -2.25
NR1H4Q96RI1 RNU7-70P-201ENST00000516941 66 ntBASIC0.97□□□□□ -2.25
NR1H4Q96RI1 MIR5197-201ENST00000583721 112 ntBASIC0.97□□□□□ -2.25
NR1H4Q96RI1 AL365205.2-201ENST00000594586 68 ntBASIC0.97□□□□□ -2.25
NR1H4Q96RI1 RNU6-94P-201ENST00000607728 107 ntBASIC0.97□□□□□ -2.25
NR1H4Q96RI1 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.97□□□□□ -2.25
NR1H4Q96RI1 MIR411-201ENST00000362239 96 ntBASIC0.96□□□□□ -2.26
NR1H4Q96RI1 Y_RNA.188-201ENST00000363952 111 ntBASIC0.96□□□□□ -2.26
NR1H4Q96RI1 Y_RNA.351-201ENST00000365436 96 ntBASIC0.96□□□□□ -2.26
NR1H4Q96RI1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.96□□□□□ -2.26
NR1H4Q96RI1 RNA5SP261-201ENST00000410536 106 ntBASIC0.96□□□□□ -2.26
NR1H4Q96RI1 U7.7-201ENST00000459276 60 ntBASIC0.96□□□□□ -2.26
NR1H4Q96RI1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.96□□□□□ -2.26
NR1H4Q96RI1 MIR4498-201ENST00000577599 66 ntBASIC0.96□□□□□ -2.26
NR1H4Q96RI1 AC025627.3-201ENST00000582078 182 ntBASIC0.96□□□□□ -2.26
NR1H4Q96RI1 RNU6-1020P-201ENST00000363684 107 ntBASIC0.95□□□□□ -2.26
NR1H4Q96RI1 RNU6-125P-201ENST00000384505 107 ntBASIC0.95□□□□□ -2.26
NR1H4Q96RI1 Y_RNA.515-201ENST00000384535 112 ntBASIC0.95□□□□□ -2.26
NR1H4Q96RI1 RNU6-205P-201ENST00000390858 107 ntBASIC0.95□□□□□ -2.26
NR1H4Q96RI1 RNU6-913P-201ENST00000390913 95 ntBASIC0.95□□□□□ -2.26
NR1H4Q96RI1 snosnR66.1-201ENST00000391095 99 ntBASIC0.95□□□□□ -2.26
NR1H4Q96RI1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.95□□□□□ -2.26
NR1H4Q96RI1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.95□□□□□ -2.26
NR1H4Q96RI1 RNU6-1053P-201ENST00000515930 101 ntBASIC0.95□□□□□ -2.26
NR1H4Q96RI1 RNA5SP255-201ENST00000516370 107 ntBASIC0.95□□□□□ -2.26
NR1H4Q96RI1 RNU6-1271P-201ENST00000517049 105 ntBASIC0.95□□□□□ -2.26
NR1H4Q96RI1 MIR1-1-201ENST00000362147 71 ntBASIC0.94□□□□□ -2.26
NR1H4Q96RI1 SNORD89-201ENST00000390981 114 ntBASIC0.94□□□□□ -2.26
NR1H4Q96RI1 SEPT7P4-201ENST00000437076 306 ntBASIC0.94□□□□□ -2.26
NR1H4Q96RI1 RNU6-1110P-201ENST00000516462 101 ntBASIC0.94□□□□□ -2.26
NR1H4Q96RI1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.94□□□□□ -2.26
NR1H4Q96RI1 AC009779.6-201ENST00000603972 165 ntBASIC0.94□□□□□ -2.26
NR1H4Q96RI1 AL020996.3-201ENST00000606617 222 ntBASIC0.94□□□□□ -2.26
NR1H4Q96RI1 Z97988.1-201ENST00000637697 135 ntBASIC0.94□□□□□ -2.26
NR1H4Q96RI1 Y_RNA.75-201ENST00000362927 97 ntBASIC0.93□□□□□ -2.26
NR1H4Q96RI1 RNA5SP127-201ENST00000411051 133 ntBASIC0.93□□□□□ -2.26
NR1H4Q96RI1 RNU7-62P-201ENST00000458856 62 ntBASIC0.93□□□□□ -2.26
NR1H4Q96RI1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.93□□□□□ -2.26
NR1H4Q96RI1 MIR8055-201ENST00000610739 97 ntBASIC0.93□□□□□ -2.26
NR1H4Q96RI1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
NR1H4Q96RI1 RNU6-978P-201ENST00000364371 103 ntBASIC0.92□□□□□ -2.26
NR1H4Q96RI1 SNORA25.7-201ENST00000364375 127 ntBASIC0.92□□□□□ -2.26
NR1H4Q96RI1 RNU1-36P-201ENST00000365130 165 ntBASIC0.92□□□□□ -2.26
NR1H4Q96RI1 Y_RNA.354-201ENST00000365448 111 ntBASIC0.92□□□□□ -2.26
NR1H4Q96RI1 Y_RNA.435-201ENST00000384095 112 ntBASIC0.92□□□□□ -2.26
NR1H4Q96RI1 Y_RNA.521-201ENST00000384560 114 ntBASIC0.92□□□□□ -2.26
NR1H4Q96RI1 MIR100-201ENST00000385259 80 ntBASIC0.92□□□□□ -2.26
NR1H4Q96RI1 AC006461.1-201ENST00000412637 326 ntBASIC0.92□□□□□ -2.26
NR1H4Q96RI1 AC090844.1-201ENST00000422019 156 ntBASIC0.92□□□□□ -2.26
NR1H4Q96RI1 AL359821.1-201ENST00000605519 182 ntBASIC0.92□□□□□ -2.26
NR1H4Q96RI1 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
NR1H4Q96RI1 MIR6078-201ENST00000611069 100 ntBASIC0.92□□□□□ -2.26
NR1H4Q96RI1 RNU6-580P-201ENST00000365159 107 ntBASIC0.91□□□□□ -2.26
NR1H4Q96RI1 Y_RNA.327-201ENST00000365201 102 ntBASIC0.91□□□□□ -2.26
NR1H4Q96RI1 Y_RNA.412-201ENST00000384001 104 ntBASIC0.91□□□□□ -2.26
NR1H4Q96RI1 Y_RNA.476-201ENST00000384347 108 ntBASIC0.91□□□□□ -2.26
NR1H4Q96RI1 Y_RNA.552-201ENST00000384665 112 ntBASIC0.91□□□□□ -2.26
NR1H4Q96RI1 RNU6-918P-201ENST00000391219 106 ntBASIC0.91□□□□□ -2.26
NR1H4Q96RI1 RNU2-64P-201ENST00000411315 191 ntBASIC0.91□□□□□ -2.26
NR1H4Q96RI1 HMGN1P33-201ENST00000432945 451 ntBASIC0.91□□□□□ -2.26
NR1H4Q96RI1 TRMT112P2-201ENST00000512910 132 ntBASIC0.91□□□□□ -2.26
NR1H4Q96RI1 MRPS18CP4-201ENST00000535821 231 ntBASIC0.91□□□□□ -2.26
NR1H4Q96RI1 MIR3152-201ENST00000579801 74 ntBASIC0.91□□□□□ -2.26
NR1H4Q96RI1 U6.106-201ENST00000636360 105 ntBASIC0.91□□□□□ -2.26
NR1H4Q96RI1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.91□□□□□ -2.26
NR1H4Q96RI1 AL596211.1-201ENST00000569873 2277 ntBASIC0.9□□□□□ -2.26
NR1H4Q96RI1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
NR1H4Q96RI1 Y_RNA.164-201ENST00000363709 102 ntBASIC0.9□□□□□ -2.27
NR1H4Q96RI1 SNORA20-201ENST00000384662 132 ntBASIC0.9□□□□□ -2.27
NR1H4Q96RI1 MIR146A-201ENST00000385201 99 ntBASIC0.9□□□□□ -2.27
NR1H4Q96RI1 MIR1827-201ENST00000408549 66 ntBASIC0.9□□□□□ -2.27
NR1H4Q96RI1 ACA64.5-201ENST00000516207 127 ntBASIC0.9□□□□□ -2.27
NR1H4Q96RI1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.9□□□□□ -2.27
NR1H4Q96RI1 MIR4431-201ENST00000579990 94 ntBASIC0.9□□□□□ -2.27
NR1H4Q96RI1 AC141273.2-201ENST00000618989 130 ntBASIC0.9□□□□□ -2.27
NR1H4Q96RI1 MIR337-201ENST00000362281 93 ntBASIC0.89□□□□□ -2.27
NR1H4Q96RI1 RNU1-133P-201ENST00000364867 167 ntBASIC0.89□□□□□ -2.27
NR1H4Q96RI1 MIR608-201ENST00000384820 100 ntBASIC0.89□□□□□ -2.27
NR1H4Q96RI1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.89□□□□□ -2.27
NR1H4Q96RI1 RNU6-321P-201ENST00000410912 106 ntBASIC0.89□□□□□ -2.27
NR1H4Q96RI1 RNU6-602P-201ENST00000411155 105 ntBASIC0.89□□□□□ -2.27
NR1H4Q96RI1 AC087343.1-201ENST00000477341 475 ntBASIC0.89□□□□□ -2.27
NR1H4Q96RI1 AC005840.1-201ENST00000498412 377 ntBASIC0.89□□□□□ -2.27
NR1H4Q96RI1 AC130289.1-201ENST00000577321 73 ntBASIC0.89□□□□□ -2.27
NR1H4Q96RI1 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
NR1H4Q96RI1 AC091932.4-201ENST00000623386 200 ntBASIC0.89□□□□□ -2.27
NR1H4Q96RI1 AC091895.1-201ENST00000624494 256 ntBASIC0.89□□□□□ -2.27
NR1H4Q96RI1 RNU6-934P-201ENST00000365154 107 ntBASIC0.88□□□□□ -2.27
NR1H4Q96RI1 MIR624-201ENST00000385217 97 ntBASIC0.88□□□□□ -2.27
NR1H4Q96RI1 MT-TG-201ENST00000387429 68 ntBASIC0.88□□□□□ -2.27
NR1H4Q96RI1 AC244023.1-201ENST00000426884 112 ntBASIC0.88□□□□□ -2.27
NR1H4Q96RI1 AC242498.1-201ENST00000604134 111 ntBASIC0.88□□□□□ -2.27
NR1H4Q96RI1 MIR376A2-201ENST00000636782 80 ntBASIC0.88□□□□□ -2.27
NR1H4Q96RI1 Y_RNA.4-201ENST00000362333 112 ntBASIC0.87□□□□□ -2.27
NR1H4Q96RI1 RNY1P10-201ENST00000363268 113 ntBASIC0.87□□□□□ -2.27
NR1H4Q96RI1 RNU4-38P-201ENST00000364472 129 ntBASIC0.87□□□□□ -2.27
NR1H4Q96RI1 RNU6-312P-201ENST00000364629 107 ntBASIC0.87□□□□□ -2.27
NR1H4Q96RI1 Y_RNA.297-201ENST00000364950 91 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms