Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RPL39P25-201ENST00000449384 154 ntBASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 SNORD77.4-201ENST00000516158 81 ntBASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 MIR4661-201ENST00000582720 75 ntBASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 MIR4719-201ENST00000585233 84 ntBASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.802-201ENST00000614892 130 ntBASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 AC243994.1-201ENST00000618627 109 ntBASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 AC134878.1-201ENST00000619901 243 ntBASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 RNU6-740P-201ENST00000364734 105 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 RNU6-1335P-201ENST00000365426 107 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.432-201ENST00000384087 111 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.461-201ENST00000384263 103 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 RNU4-70P-201ENST00000384579 139 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 SNORA40.5-201ENST00000391061 128 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 RNU6-994P-201ENST00000410507 111 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 RNU6-1045P-201ENST00000516321 107 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 AC004817.2-201ENST00000561794 651 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 MIR4662B-201ENST00000579498 81 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 AL365205.2-201ENST00000594586 68 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.24-201ENST00000362508 103 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.168-201ENST00000363740 102 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 SNORA1.1-201ENST00000364671 133 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 MT-TN-201ENST00000387400 73 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 MTCYBP9-201ENST00000431021 303 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 RNU6-977P-201ENST00000516411 103 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 RNU6-958P-201ENST00000516995 106 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 MIR5688-201ENST00000580619 83 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 PRELID3BP2-201ENST00000605362 201 ntBASIC0.46□□□□□ -2.34
SHROOM3Q8TF72 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-34-201ENST00000362441 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-12-201ENST00000362583 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-29-201ENST00000362834 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-9-201ENST00000362912 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-21-201ENST00000362963 81 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-14-201ENST00000363090 81 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-13-201ENST00000363358 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-41-201ENST00000363608 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-11-201ENST00000363616 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-5-201ENST00000363633 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-39-201ENST00000363694 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-4-201ENST00000363810 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-16-201ENST00000363887 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-6-201ENST00000363942 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.193-201ENST00000363979 102 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-42-201ENST00000364273 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.241-201ENST00000364470 117 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-15-201ENST00000364809 81 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 RNU6-818P-201ENST00000364837 108 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-1-201ENST00000364961 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-26-201ENST00000365067 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-10-201ENST00000365073 81 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-43-201ENST00000365503 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-36-201ENST00000365629 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.539-201ENST00000384635 107 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.572-201ENST00000384757 98 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 MIR548F4-201ENST00000408515 105 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 RPS3AP1-201ENST00000413190 320 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 snoU13.19-201ENST00000459148 104 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 MIR548AO-201ENST00000579992 96 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD115-40-201ENST00000606510 82 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 RNU6-94P-201ENST00000607728 107 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.812-201ENST00000610788 101 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 AL442067.1-201ENST00000613261 223 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.784-201ENST00000613803 101 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.787-201ENST00000616522 101 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.780-201ENST00000617336 101 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.801-201ENST00000619005 101 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.37-201ENST00000362606 108 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 RNU6-923P-201ENST00000364753 107 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 RNY3P5-201ENST00000384127 102 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.574-201ENST00000384766 95 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 MIR526A2-201ENST00000390198 65 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 MIR548I3-201ENST00000408378 149 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 AL035398.1-201ENST00000430869 322 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 RNU7-73P-201ENST00000458743 63 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 SNORD123-201ENST00000459473 70 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 PSMC1P5-201ENST00000512850 177 ntBASIC0.45□□□□□ -2.34
SHROOM3Q8TF72 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SHROOM3Q8TF72 MIR377-201ENST00000362145 69 ntBASIC0.44□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.76-201ENST00000362931 109 ntBASIC0.44□□□□□ -2.34
SHROOM3Q8TF72 SNORD114-24-201ENST00000365029 72 ntBASIC0.44□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.549-201ENST00000384657 102 ntBASIC0.44□□□□□ -2.34
SHROOM3Q8TF72 RNU6-1228P-201ENST00000391014 107 ntBASIC0.44□□□□□ -2.34
SHROOM3Q8TF72 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.44□□□□□ -2.34
SHROOM3Q8TF72 AL117187.1-201ENST00000555482 181 ntBASIC0.44□□□□□ -2.34
SHROOM3Q8TF72 MIR4804-201ENST00000581683 73 ntBASIC0.44□□□□□ -2.34
SHROOM3Q8TF72 MIR8062-201ENST00000621515 85 ntBASIC0.44□□□□□ -2.34
SHROOM3Q8TF72 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.23-201ENST00000362496 106 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 RNU6-369P-201ENST00000362515 102 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 RNU6-653P-201ENST00000363074 106 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 RNU6-103P-201ENST00000363686 107 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.304-201ENST00000365011 112 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 RNU6-1189P-201ENST00000383958 107 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.422-201ENST00000384054 114 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.486-201ENST00000384398 107 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 RNU7-62P-201ENST00000458856 62 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms