Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AF228730.3-201ENST00000436691 102 ntBASIC0.96□□□□□ -2.26
RTL3Q8N8U3 SNORD124-201ENST00000459577 104 ntBASIC0.96□□□□□ -2.26
RTL3Q8N8U3 PDCD5P2-201ENST00000507570 312 ntBASIC0.96□□□□□ -2.26
RTL3Q8N8U3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
RTL3Q8N8U3 AC008163.1-202ENST00000636004 2889 ntBASIC0.96□□□□□ -2.26
RTL3Q8N8U3 MIR96-201ENST00000362288 78 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 Y_RNA.224-201ENST00000364308 111 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 Y_RNA.355-201ENST00000365462 98 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 Y_RNA.363-201ENST00000365529 113 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 Y_RNA.370-201ENST00000365589 108 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 RNU6-597P-201ENST00000365620 102 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 Y_RNA.441-201ENST00000384123 112 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 Y_RNA.494-201ENST00000384432 111 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
RTL3Q8N8U3 MIR1302-7-201ENST00000408841 72 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 RPS26P48-201ENST00000491713 339 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 SNORA18.4-201ENST00000516440 124 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 SNORD116-25-201ENST00000516517 92 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 SNORD36C-201ENST00000516733 66 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 AP003484.1-201ENST00000530974 250 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 MIR376A2-201ENST00000636782 80 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 MIR6767-201ENST00000637302 66 ntBASIC0.95□□□□□ -2.26
RTL3Q8N8U3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
RTL3Q8N8U3 MIR942-201ENST00000401111 86 ntBASIC0.94□□□□□ -2.26
RTL3Q8N8U3 RNU5E-9P-201ENST00000411164 104 ntBASIC0.94□□□□□ -2.26
RTL3Q8N8U3 AL392103.1-201ENST00000447000 198 ntBASIC0.94□□□□□ -2.26
RTL3Q8N8U3 RNU7-121P-201ENST00000516604 62 ntBASIC0.94□□□□□ -2.26
RTL3Q8N8U3 MIR4791-201ENST00000607666 84 ntBASIC0.94□□□□□ -2.26
RTL3Q8N8U3 AC090425.1-201ENST00000610007 140 ntBASIC0.94□□□□□ -2.26
RTL3Q8N8U3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.94□□□□□ -2.26
RTL3Q8N8U3 Y_RNA.118-201ENST00000363300 101 ntBASIC0.93□□□□□ -2.26
RTL3Q8N8U3 Y_RNA.191-201ENST00000363972 113 ntBASIC0.93□□□□□ -2.26
RTL3Q8N8U3 RNU4-84P-201ENST00000364200 139 ntBASIC0.93□□□□□ -2.26
RTL3Q8N8U3 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
RTL3Q8N8U3 Y_RNA.440-201ENST00000384120 114 ntBASIC0.93□□□□□ -2.26
RTL3Q8N8U3 MIR624-201ENST00000385217 97 ntBASIC0.93□□□□□ -2.26
RTL3Q8N8U3 SEPT7P4-201ENST00000437076 306 ntBASIC0.93□□□□□ -2.26
RTL3Q8N8U3 RNU7-90P-201ENST00000459216 62 ntBASIC0.93□□□□□ -2.26
RTL3Q8N8U3 RNU6-861P-201ENST00000516745 106 ntBASIC0.93□□□□□ -2.26
RTL3Q8N8U3 MIR5197-201ENST00000583721 112 ntBASIC0.93□□□□□ -2.26
RTL3Q8N8U3 AL020996.3-201ENST00000606617 222 ntBASIC0.93□□□□□ -2.26
RTL3Q8N8U3 FTX_2.1-201ENST00000618816 94 ntBASIC0.93□□□□□ -2.26
RTL3Q8N8U3 MIR4251-201ENST00000635819 61 ntBASIC0.93□□□□□ -2.26
RTL3Q8N8U3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
RTL3Q8N8U3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
RTL3Q8N8U3 RNA5SP264-201ENST00000363115 107 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 Y_RNA.241-201ENST00000364470 117 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 RNU6-1189P-201ENST00000383958 107 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 SNORA27-201ENST00000384323 126 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 RNU6-1067P-201ENST00000384752 107 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 PCNPP3-201ENST00000393579 471 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 MIR1185-1-201ENST00000408598 86 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 RNU6-1135P-201ENST00000411083 103 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 RNU7-73P-201ENST00000458743 63 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 AC107027.2-201ENST00000512197 115 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 RNU6-113P-201ENST00000516653 101 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 MIR3129-201ENST00000581095 76 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 MIR4452-201ENST00000583004 71 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 MIR6857-201ENST00000613267 93 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 MIR7111-201ENST00000619751 72 ntBASIC0.92□□□□□ -2.26
RTL3Q8N8U3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
RTL3Q8N8U3 Y_RNA.393-201ENST00000383936 102 ntBASIC0.91□□□□□ -2.26
RTL3Q8N8U3 SNORA51.10-201ENST00000384418 136 ntBASIC0.91□□□□□ -2.26
RTL3Q8N8U3 MIR570-201ENST00000384917 97 ntBASIC0.91□□□□□ -2.26
RTL3Q8N8U3 AC006461.1-201ENST00000412637 326 ntBASIC0.91□□□□□ -2.26
RTL3Q8N8U3 RNU7-21P-201ENST00000459430 62 ntBASIC0.91□□□□□ -2.26
RTL3Q8N8U3 snoU13.18-201ENST00000459483 104 ntBASIC0.91□□□□□ -2.26
RTL3Q8N8U3 RPS29P24-201ENST00000486345 171 ntBASIC0.91□□□□□ -2.26
RTL3Q8N8U3 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
RTL3Q8N8U3 SCARNA15-202ENST00000516881 127 ntBASIC0.91□□□□□ -2.26
RTL3Q8N8U3 RNU11-2P-201ENST00000516898 142 ntBASIC0.91□□□□□ -2.26
RTL3Q8N8U3 RNU6-182P-201ENST00000516970 105 ntBASIC0.91□□□□□ -2.26
RTL3Q8N8U3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.91□□□□□ -2.26
RTL3Q8N8U3 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
RTL3Q8N8U3 AC243994.1-201ENST00000618627 109 ntBASIC0.91□□□□□ -2.26
RTL3Q8N8U3 MTND1P7-201ENST00000632801 297 ntBASIC0.91□□□□□ -2.26
RTL3Q8N8U3 RNU1-93P-201ENST00000364704 169 ntBASIC0.9□□□□□ -2.27
RTL3Q8N8U3 RNU6-42P-201ENST00000384165 107 ntBASIC0.9□□□□□ -2.27
RTL3Q8N8U3 RNU6-768P-201ENST00000384683 107 ntBASIC0.9□□□□□ -2.27
RTL3Q8N8U3 RNU6-239P-201ENST00000390990 99 ntBASIC0.9□□□□□ -2.27
RTL3Q8N8U3 RNA5SP127-201ENST00000411051 133 ntBASIC0.9□□□□□ -2.27
RTL3Q8N8U3 MTND5P15-201ENST00000434246 349 ntBASIC0.9□□□□□ -2.27
RTL3Q8N8U3 snoU13.16-201ENST00000459350 104 ntBASIC0.9□□□□□ -2.27
RTL3Q8N8U3 RNU7-96P-201ENST00000459535 64 ntBASIC0.9□□□□□ -2.27
RTL3Q8N8U3 AC107297.1-201ENST00000459991 176 ntBASIC0.9□□□□□ -2.27
RTL3Q8N8U3 RNU6-998P-201ENST00000515894 101 ntBASIC0.9□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.662-201ENST00000516028 97 ntBASIC0.9□□□□□ -2.27
RTL3Q8N8U3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.9□□□□□ -2.27
RTL3Q8N8U3 MIR548AO-201ENST00000579992 96 ntBASIC0.9□□□□□ -2.27
RTL3Q8N8U3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.9□□□□□ -2.27
RTL3Q8N8U3 MIR373-201ENST00000362273 69 ntBASIC0.89□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.337-201ENST00000365312 102 ntBASIC0.89□□□□□ -2.27
RTL3Q8N8U3 SNORA75.2-201ENST00000391138 150 ntBASIC0.89□□□□□ -2.27
RTL3Q8N8U3 SNORA75.3-201ENST00000391231 150 ntBASIC0.89□□□□□ -2.27
RTL3Q8N8U3 AC074198.2-201ENST00000508153 258 ntBASIC0.89□□□□□ -2.27
RTL3Q8N8U3 RNA5SP220-201ENST00000516298 104 ntBASIC0.89□□□□□ -2.27
RTL3Q8N8U3 MIR3646-201ENST00000578301 84 ntBASIC0.89□□□□□ -2.27
RTL3Q8N8U3 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
RTL3Q8N8U3 AL078603.1-201ENST00000603824 313 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms