Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AL035398.1-201ENST00000430869 322 ntBASIC1.12□□□□□ -2.23
BEST3Q8N1M1 SNORD79.1-201ENST00000516069 84 ntBASIC1.12□□□□□ -2.23
BEST3Q8N1M1 RNA5SP102-201ENST00000516865 106 ntBASIC1.12□□□□□ -2.23
BEST3Q8N1M1 RNU6-958P-201ENST00000516995 106 ntBASIC1.12□□□□□ -2.23
BEST3Q8N1M1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
BEST3Q8N1M1 RNU4-84P-201ENST00000364200 139 ntBASIC1.11□□□□□ -2.23
BEST3Q8N1M1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.11□□□□□ -2.23
BEST3Q8N1M1 MIR1185-1-201ENST00000408598 86 ntBASIC1.11□□□□□ -2.23
BEST3Q8N1M1 AL392103.1-201ENST00000447000 198 ntBASIC1.11□□□□□ -2.23
BEST3Q8N1M1 RNU7-73P-201ENST00000458743 63 ntBASIC1.11□□□□□ -2.23
BEST3Q8N1M1 RNU7-80P-201ENST00000459562 61 ntBASIC1.11□□□□□ -2.23
BEST3Q8N1M1 RNU6-998P-201ENST00000515894 101 ntBASIC1.11□□□□□ -2.23
BEST3Q8N1M1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.11□□□□□ -2.23
BEST3Q8N1M1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.11□□□□□ -2.23
BEST3Q8N1M1 MIR548AO-201ENST00000579992 96 ntBASIC1.11□□□□□ -2.23
BEST3Q8N1M1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
BEST3Q8N1M1 Y_RNA.351-201ENST00000365436 96 ntBASIC1.1□□□□□ -2.23
BEST3Q8N1M1 Y_RNA.441-201ENST00000384123 112 ntBASIC1.1□□□□□ -2.23
BEST3Q8N1M1 Y_RNA.454-201ENST00000384224 113 ntBASIC1.1□□□□□ -2.23
BEST3Q8N1M1 SEPT14P17-201ENST00000617978 177 ntBASIC1.1□□□□□ -2.23
BEST3Q8N1M1 AC027335.2-201ENST00000624030 375 ntBASIC1.1□□□□□ -2.23
BEST3Q8N1M1 MIR376A2-201ENST00000636782 80 ntBASIC1.1□□□□□ -2.23
BEST3Q8N1M1 RNU6-396P-201ENST00000365369 105 ntBASIC1.09□□□□□ -2.23
BEST3Q8N1M1 RNU6-768P-201ENST00000384683 107 ntBASIC1.09□□□□□ -2.23
BEST3Q8N1M1 SNORA75.2-201ENST00000391138 150 ntBASIC1.09□□□□□ -2.23
BEST3Q8N1M1 SNORA75.3-201ENST00000391231 150 ntBASIC1.09□□□□□ -2.23
BEST3Q8N1M1 MIR1302-7-201ENST00000408841 72 ntBASIC1.09□□□□□ -2.23
BEST3Q8N1M1 RNU2-64P-201ENST00000411315 191 ntBASIC1.09□□□□□ -2.23
BEST3Q8N1M1 RNU7-21P-201ENST00000459430 62 ntBASIC1.09□□□□□ -2.23
BEST3Q8N1M1 RNU7-121P-201ENST00000516604 62 ntBASIC1.09□□□□□ -2.23
BEST3Q8N1M1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.09□□□□□ -2.23
BEST3Q8N1M1 MIR3646-201ENST00000578301 84 ntBASIC1.09□□□□□ -2.23
BEST3Q8N1M1 MIR6504-201ENST00000613520 61 ntBASIC1.09□□□□□ -2.23
BEST3Q8N1M1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
BEST3Q8N1M1 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
BEST3Q8N1M1 RNU6-1135P-201ENST00000411083 103 ntBASIC1.08□□□□□ -2.24
BEST3Q8N1M1 RNU5E-9P-201ENST00000411164 104 ntBASIC1.08□□□□□ -2.24
BEST3Q8N1M1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.08□□□□□ -2.24
BEST3Q8N1M1 RNU2-11P-201ENST00000459191 187 ntBASIC1.08□□□□□ -2.24
BEST3Q8N1M1 RNU7-90P-201ENST00000459216 62 ntBASIC1.08□□□□□ -2.24
BEST3Q8N1M1 MIR2115-201ENST00000516657 100 ntBASIC1.08□□□□□ -2.24
BEST3Q8N1M1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.08□□□□□ -2.24
BEST3Q8N1M1 FTX_2.1-201ENST00000618816 94 ntBASIC1.08□□□□□ -2.24
BEST3Q8N1M1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
BEST3Q8N1M1 MIR302B-201ENST00000362188 73 ntBASIC1.07□□□□□ -2.24
BEST3Q8N1M1 MIR342-201ENST00000362212 99 ntBASIC1.07□□□□□ -2.24
BEST3Q8N1M1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.07□□□□□ -2.24
BEST3Q8N1M1 SNORA75.5-201ENST00000391291 81 ntBASIC1.07□□□□□ -2.24
BEST3Q8N1M1 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
BEST3Q8N1M1 AC063976.4-201ENST00000421971 163 ntBASIC1.07□□□□□ -2.24
BEST3Q8N1M1 RNU7-70P-201ENST00000516941 66 ntBASIC1.07□□□□□ -2.24
BEST3Q8N1M1 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.07□□□□□ -2.24
BEST3Q8N1M1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.07□□□□□ -2.24
BEST3Q8N1M1 MIR6844-201ENST00000637122 62 ntBASIC1.07□□□□□ -2.24
BEST3Q8N1M1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.06□□□□□ -2.24
BEST3Q8N1M1 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
BEST3Q8N1M1 Y_RNA.270-201ENST00000364693 104 ntBASIC1.06□□□□□ -2.24
BEST3Q8N1M1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.06□□□□□ -2.24
BEST3Q8N1M1 MIR19B1-201ENST00000384829 87 ntBASIC1.06□□□□□ -2.24
BEST3Q8N1M1 RNU6-913P-201ENST00000390913 95 ntBASIC1.06□□□□□ -2.24
BEST3Q8N1M1 MIR548I3-201ENST00000408378 149 ntBASIC1.06□□□□□ -2.24
BEST3Q8N1M1 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
BEST3Q8N1M1 AC002429.1-201ENST00000437672 148 ntBASIC1.06□□□□□ -2.24
BEST3Q8N1M1 RNU7-40P-201ENST00000516397 64 ntBASIC1.06□□□□□ -2.24
BEST3Q8N1M1 DNAJC19P2-201ENST00000593340 302 ntBASIC1.06□□□□□ -2.24
BEST3Q8N1M1 AC098479.1-201ENST00000609225 154 ntBASIC1.06□□□□□ -2.24
BEST3Q8N1M1 MIR8055-201ENST00000610739 97 ntBASIC1.06□□□□□ -2.24
BEST3Q8N1M1 MIR6516-201ENST00000630554 81 ntBASIC1.06□□□□□ -2.24
BEST3Q8N1M1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
BEST3Q8N1M1 AC008163.1-202ENST00000636004 2889 ntBASIC1.06□□□□□ -2.24
BEST3Q8N1M1 MIR96-201ENST00000362288 78 ntBASIC1.05□□□□□ -2.24
BEST3Q8N1M1 RNU1-124P-201ENST00000363861 145 ntBASIC1.05□□□□□ -2.24
BEST3Q8N1M1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.05□□□□□ -2.24
BEST3Q8N1M1 RNU6-1082P-201ENST00000364574 107 ntBASIC1.05□□□□□ -2.24
BEST3Q8N1M1 Y_RNA.272-201ENST00000364696 102 ntBASIC1.05□□□□□ -2.24
BEST3Q8N1M1 RNU6-613P-201ENST00000410412 108 ntBASIC1.05□□□□□ -2.24
BEST3Q8N1M1 RNA5SP261-201ENST00000410536 106 ntBASIC1.05□□□□□ -2.24
BEST3Q8N1M1 RNA5SP404-201ENST00000517118 132 ntBASIC1.05□□□□□ -2.24
BEST3Q8N1M1 MIR3668-201ENST00000582138 75 ntBASIC1.05□□□□□ -2.24
BEST3Q8N1M1 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
BEST3Q8N1M1 AL020996.3-201ENST00000606617 222 ntBASIC1.05□□□□□ -2.24
BEST3Q8N1M1 AC091932.4-201ENST00000623386 200 ntBASIC1.05□□□□□ -2.24
BEST3Q8N1M1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
BEST3Q8N1M1 RNU6-818P-201ENST00000364837 108 ntBASIC1.04□□□□□ -2.24
BEST3Q8N1M1 RNU6-939P-201ENST00000384634 107 ntBASIC1.04□□□□□ -2.24
BEST3Q8N1M1 MT-TN-201ENST00000387400 73 ntBASIC1.04□□□□□ -2.24
BEST3Q8N1M1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.04□□□□□ -2.24
BEST3Q8N1M1 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
BEST3Q8N1M1 AC074198.2-201ENST00000508153 258 ntBASIC1.04□□□□□ -2.24
BEST3Q8N1M1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.04□□□□□ -2.24
BEST3Q8N1M1 RNU6-1149P-201ENST00000516810 97 ntBASIC1.04□□□□□ -2.24
BEST3Q8N1M1 SCARNA15-202ENST00000516881 127 ntBASIC1.04□□□□□ -2.24
BEST3Q8N1M1 AC131055.1-201ENST00000584626 316 ntBASIC1.04□□□□□ -2.24
BEST3Q8N1M1 Z97988.1-201ENST00000637697 135 ntBASIC1.04□□□□□ -2.24
BEST3Q8N1M1 AL596211.1-201ENST00000569873 2277 ntBASIC1.03□□□□□ -2.24
BEST3Q8N1M1 SNORA1.1-201ENST00000364671 133 ntBASIC1.03□□□□□ -2.24
BEST3Q8N1M1 RNU1-133P-201ENST00000364867 167 ntBASIC1.03□□□□□ -2.24
BEST3Q8N1M1 SNORD114-22-201ENST00000365423 72 ntBASIC1.03□□□□□ -2.24
BEST3Q8N1M1 RNU6-1336P-201ENST00000383886 109 ntBASIC1.03□□□□□ -2.24
BEST3Q8N1M1 RNU6-886P-201ENST00000384319 105 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 577.6 ms