Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RNU6-947P-201ENST00000516264 106 ntBASIC1.34□□□□□ -2.19
VPS52Q8N1B4 AC068338.1-201ENST00000565567 176 ntBASIC1.34□□□□□ -2.19
VPS52Q8N1B4 MIR3646-201ENST00000578301 84 ntBASIC1.34□□□□□ -2.19
VPS52Q8N1B4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.33□□□□□ -2.2
VPS52Q8N1B4 RNU6-42P-201ENST00000384165 107 ntBASIC1.33□□□□□ -2.2
VPS52Q8N1B4 SNORA51.10-201ENST00000384418 136 ntBASIC1.33□□□□□ -2.2
VPS52Q8N1B4 MIR570-201ENST00000384917 97 ntBASIC1.33□□□□□ -2.2
VPS52Q8N1B4 Y_RNA.580-201ENST00000391004 95 ntBASIC1.33□□□□□ -2.2
VPS52Q8N1B4 RPS29P29-201ENST00000456396 171 ntBASIC1.33□□□□□ -2.2
VPS52Q8N1B4 RPS29P24-201ENST00000486345 171 ntBASIC1.33□□□□□ -2.2
VPS52Q8N1B4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.33□□□□□ -2.2
VPS52Q8N1B4 AC243994.1-201ENST00000618627 109 ntBASIC1.33□□□□□ -2.2
VPS52Q8N1B4 MIR8065-201ENST00000620577 100 ntBASIC1.33□□□□□ -2.2
VPS52Q8N1B4 MIR4251-201ENST00000635819 61 ntBASIC1.33□□□□□ -2.2
VPS52Q8N1B4 SNORA75.5-201ENST00000391291 81 ntBASIC1.32□□□□□ -2.2
VPS52Q8N1B4 MIR548I3-201ENST00000408378 149 ntBASIC1.32□□□□□ -2.2
VPS52Q8N1B4 MIR548I1-201ENST00000408810 149 ntBASIC1.32□□□□□ -2.2
VPS52Q8N1B4 AC048334.1-201ENST00000477975 159 ntBASIC1.32□□□□□ -2.2
VPS52Q8N1B4 SNORA31.2-201ENST00000516019 134 ntBASIC1.32□□□□□ -2.2
VPS52Q8N1B4 SNORA31.4-201ENST00000516049 129 ntBASIC1.32□□□□□ -2.2
VPS52Q8N1B4 RNA5SP220-201ENST00000516298 104 ntBASIC1.32□□□□□ -2.2
VPS52Q8N1B4 DNAJC19P2-201ENST00000593340 302 ntBASIC1.32□□□□□ -2.2
VPS52Q8N1B4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
VPS52Q8N1B4 SNORD114-27-201ENST00000363766 70 ntBASIC1.31□□□□□ -2.2
VPS52Q8N1B4 RNU6-1082P-201ENST00000364574 107 ntBASIC1.31□□□□□ -2.2
VPS52Q8N1B4 RNU7-96P-201ENST00000459535 64 ntBASIC1.31□□□□□ -2.2
VPS52Q8N1B4 RNU6-998P-201ENST00000515894 101 ntBASIC1.31□□□□□ -2.2
VPS52Q8N1B4 RN7SKP179-201ENST00000516126 217 ntBASIC1.31□□□□□ -2.2
VPS52Q8N1B4 SCARNA15-202ENST00000516881 127 ntBASIC1.31□□□□□ -2.2
VPS52Q8N1B4 AC019288.1-201ENST00000557918 224 ntBASIC1.31□□□□□ -2.2
VPS52Q8N1B4 MIR6734-201ENST00000621166 68 ntBASIC1.31□□□□□ -2.2
VPS52Q8N1B4 MTND1P7-201ENST00000632801 297 ntBASIC1.31□□□□□ -2.2
VPS52Q8N1B4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
VPS52Q8N1B4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
VPS52Q8N1B4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.3□□□□□ -2.2
VPS52Q8N1B4 RNA5SP264-201ENST00000363115 107 ntBASIC1.3□□□□□ -2.2
VPS52Q8N1B4 RNU1-93P-201ENST00000364704 169 ntBASIC1.3□□□□□ -2.2
VPS52Q8N1B4 MIR1302-7-201ENST00000408841 72 ntBASIC1.3□□□□□ -2.2
VPS52Q8N1B4 AL392103.1-201ENST00000447000 198 ntBASIC1.3□□□□□ -2.2
VPS52Q8N1B4 RNU7-73P-201ENST00000458743 63 ntBASIC1.3□□□□□ -2.2
VPS52Q8N1B4 RNU6-1212P-201ENST00000517023 104 ntBASIC1.3□□□□□ -2.2
VPS52Q8N1B4 RMST_2.1-201ENST00000617263 136 ntBASIC1.3□□□□□ -2.2
VPS52Q8N1B4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
VPS52Q8N1B4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
VPS52Q8N1B4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.29□□□□□ -2.2
VPS52Q8N1B4 RNU6-1336P-201ENST00000383886 109 ntBASIC1.29□□□□□ -2.2
VPS52Q8N1B4 Y_RNA.464-201ENST00000384282 110 ntBASIC1.29□□□□□ -2.2
VPS52Q8N1B4 MIR1185-1-201ENST00000408598 86 ntBASIC1.29□□□□□ -2.2
VPS52Q8N1B4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.29□□□□□ -2.2
VPS52Q8N1B4 snoU13.16-201ENST00000459350 104 ntBASIC1.29□□□□□ -2.2
VPS52Q8N1B4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.29□□□□□ -2.2
VPS52Q8N1B4 MIR3658-201ENST00000636291 56 ntBASIC1.29□□□□□ -2.2
VPS52Q8N1B4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.28□□□□□ -2.2
VPS52Q8N1B4 AL035398.1-201ENST00000430869 322 ntBASIC1.28□□□□□ -2.2
VPS52Q8N1B4 RNU7-53P-201ENST00000516705 60 ntBASIC1.28□□□□□ -2.2
VPS52Q8N1B4 RNU11-2P-201ENST00000516898 142 ntBASIC1.28□□□□□ -2.2
VPS52Q8N1B4 MIR3144-201ENST00000579460 79 ntBASIC1.28□□□□□ -2.2
VPS52Q8N1B4 MIR548AO-201ENST00000579992 96 ntBASIC1.28□□□□□ -2.2
VPS52Q8N1B4 MIR6844-201ENST00000637122 62 ntBASIC1.28□□□□□ -2.2
VPS52Q8N1B4 RNA5SP327-201ENST00000362494 101 ntBASIC1.27□□□□□ -2.21
VPS52Q8N1B4 RNU7-67P-201ENST00000459003 62 ntBASIC1.27□□□□□ -2.21
VPS52Q8N1B4 AC131055.1-201ENST00000584626 316 ntBASIC1.27□□□□□ -2.21
VPS52Q8N1B4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS52Q8N1B4 Y_RNA.52-201ENST00000362760 96 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 SNORA25.3-201ENST00000363205 127 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 RNU6-818P-201ENST00000364837 108 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 RNU6-1130P-201ENST00000365434 107 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 RNU6-449P-201ENST00000383914 107 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 RNU6-804P-201ENST00000384286 107 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 MIR520E-201ENST00000384867 87 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 RNU6-913P-201ENST00000390913 95 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 RNU7-80P-201ENST00000459562 61 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 SNORD79.1-201ENST00000516069 84 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 RNU6-1149P-201ENST00000516810 97 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 RNU6-958P-201ENST00000516995 106 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 MIR8055-201ENST00000610739 97 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 AC104465.1-201ENST00000611365 139 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 Y_RNA.778-201ENST00000620203 90 ntBASIC1.26□□□□□ -2.21
VPS52Q8N1B4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.26□□□□□ -2.21
VPS52Q8N1B4 MIR103A2-201ENST00000362154 78 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 Y_RNA.351-201ENST00000365436 96 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 Y_RNA.454-201ENST00000384224 113 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 Y_RNA.497-201ENST00000384447 98 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 MT-TR-201ENST00000387439 65 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 RNU6-910P-201ENST00000390844 107 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 SNORD12-201ENST00000391002 90 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 RNU6-588P-201ENST00000410281 105 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 RNU2-11P-201ENST00000459191 187 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 RNA5SP236-201ENST00000516169 116 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS52Q8N1B4 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 AL022345.2-201ENST00000606307 135 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 AL020996.3-201ENST00000606617 222 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 AC091932.4-201ENST00000623386 200 ntBASIC1.25□□□□□ -2.21
VPS52Q8N1B4 MTND5P32-201ENST00000560711 1802 ntBASIC1.24□□□□□ -2.21
VPS52Q8N1B4 Y_RNA.251-201ENST00000364551 99 ntBASIC1.24□□□□□ -2.21
VPS52Q8N1B4 RPS29P1-201ENST00000465274 159 ntBASIC1.24□□□□□ -2.21
VPS52Q8N1B4 AC087343.1-201ENST00000477341 475 ntBASIC1.24□□□□□ -2.21
VPS52Q8N1B4 HSPE1P19-201ENST00000603327 295 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms