Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 SNORA79-201ENST00000408376 140 ntBASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 RNU2-64P-201ENST00000411315 191 ntBASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 AC090844.1-201ENST00000422019 156 ntBASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 RPS29P24-201ENST00000486345 171 ntBASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 AP000753.3-201ENST00000604083 169 ntBASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 7SK.10-201ENST00000621414 298 ntBASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
CCDC60Q8IWA6 MIR342-201ENST00000362212 99 ntBASIC0.8□□□□□ -2.28
CCDC60Q8IWA6 Y_RNA.7-201ENST00000362352 102 ntBASIC0.8□□□□□ -2.28
CCDC60Q8IWA6 Y_RNA.23-201ENST00000362496 106 ntBASIC0.8□□□□□ -2.28
CCDC60Q8IWA6 RNU6-923P-201ENST00000364753 107 ntBASIC0.8□□□□□ -2.28
CCDC60Q8IWA6 RNU6-1189P-201ENST00000383958 107 ntBASIC0.8□□□□□ -2.28
CCDC60Q8IWA6 RNU6-196P-201ENST00000384315 107 ntBASIC0.8□□□□□ -2.28
CCDC60Q8IWA6 RNU6-125P-201ENST00000384505 107 ntBASIC0.8□□□□□ -2.28
CCDC60Q8IWA6 RNA5SP255-201ENST00000516370 107 ntBASIC0.8□□□□□ -2.28
CCDC60Q8IWA6 RNU6-197P-201ENST00000516680 100 ntBASIC0.8□□□□□ -2.28
CCDC60Q8IWA6 RNU7-53P-201ENST00000516705 60 ntBASIC0.8□□□□□ -2.28
CCDC60Q8IWA6 MIR3128-201ENST00000581957 66 ntBASIC0.8□□□□□ -2.28
CCDC60Q8IWA6 AC062037.2-201ENST00000610137 73 ntBASIC0.8□□□□□ -2.28
CCDC60Q8IWA6 MIR6515-201ENST00000619843 57 ntBASIC0.8□□□□□ -2.28
CCDC60Q8IWA6 U4.1-201ENST00000620349 87 ntBASIC0.8□□□□□ -2.28
CCDC60Q8IWA6 RNU6-103P-201ENST00000363686 107 ntBASIC0.79□□□□□ -2.28
CCDC60Q8IWA6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.79□□□□□ -2.28
CCDC60Q8IWA6 SNORA1-201ENST00000384107 130 ntBASIC0.79□□□□□ -2.28
CCDC60Q8IWA6 RNU6-574P-201ENST00000384265 107 ntBASIC0.79□□□□□ -2.28
CCDC60Q8IWA6 Y_RNA.539-201ENST00000384635 107 ntBASIC0.79□□□□□ -2.28
CCDC60Q8IWA6 MIR508-201ENST00000384857 115 ntBASIC0.79□□□□□ -2.28
CCDC60Q8IWA6 RNU6-913P-201ENST00000390913 95 ntBASIC0.79□□□□□ -2.28
CCDC60Q8IWA6 AL121914.1-201ENST00000450188 156 ntBASIC0.79□□□□□ -2.28
CCDC60Q8IWA6 MTND1P19-201ENST00000511780 315 ntBASIC0.79□□□□□ -2.28
CCDC60Q8IWA6 MIR3129-201ENST00000581095 76 ntBASIC0.79□□□□□ -2.28
CCDC60Q8IWA6 AC097639.2-201ENST00000603159 172 ntBASIC0.79□□□□□ -2.28
CCDC60Q8IWA6 RNU2-4P-201ENST00000606190 192 ntBASIC0.79□□□□□ -2.28
CCDC60Q8IWA6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CCDC60Q8IWA6 Y_RNA.60-201ENST00000362831 98 ntBASIC0.78□□□□□ -2.28
CCDC60Q8IWA6 Y_RNA.168-201ENST00000363740 102 ntBASIC0.78□□□□□ -2.28
CCDC60Q8IWA6 RNY1-201ENST00000364228 113 ntBASIC0.78□□□□□ -2.28
CCDC60Q8IWA6 RNU1-133P-201ENST00000364867 167 ntBASIC0.78□□□□□ -2.28
CCDC60Q8IWA6 RNU6-702P-201ENST00000364982 107 ntBASIC0.78□□□□□ -2.28
CCDC60Q8IWA6 RNY4P28-201ENST00000365281 93 ntBASIC0.78□□□□□ -2.28
CCDC60Q8IWA6 AL035398.1-201ENST00000430869 322 ntBASIC0.78□□□□□ -2.28
CCDC60Q8IWA6 HMGN1P33-201ENST00000432945 451 ntBASIC0.78□□□□□ -2.28
CCDC60Q8IWA6 AC133485.1-201ENST00000567176 124 ntBASIC0.78□□□□□ -2.28
CCDC60Q8IWA6 AC138907.6-201ENST00000568401 126 ntBASIC0.78□□□□□ -2.28
CCDC60Q8IWA6 MIR4744-201ENST00000581563 82 ntBASIC0.78□□□□□ -2.28
CCDC60Q8IWA6 MIR4503-201ENST00000582187 83 ntBASIC0.78□□□□□ -2.28
CCDC60Q8IWA6 Y_RNA.410-201ENST00000383992 113 ntBASIC0.77□□□□□ -2.29
CCDC60Q8IWA6 MIR608-201ENST00000384820 100 ntBASIC0.77□□□□□ -2.29
CCDC60Q8IWA6 MIR605-201ENST00000385078 83 ntBASIC0.77□□□□□ -2.29
CCDC60Q8IWA6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
CCDC60Q8IWA6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.77□□□□□ -2.29
CCDC60Q8IWA6 RNU7-73P-201ENST00000458743 63 ntBASIC0.77□□□□□ -2.29
CCDC60Q8IWA6 RNU2-11P-201ENST00000459191 187 ntBASIC0.77□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.680-201ENST00000516441 93 ntBASIC0.77□□□□□ -2.29
CCDC60Q8IWA6 AC004812.1-201ENST00000540773 146 ntBASIC0.77□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.20-201ENST00000362479 113 ntBASIC0.76□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.440-201ENST00000384120 114 ntBASIC0.76□□□□□ -2.29
CCDC60Q8IWA6 MIR100-201ENST00000385259 80 ntBASIC0.76□□□□□ -2.29
CCDC60Q8IWA6 MT-TN-201ENST00000387400 73 ntBASIC0.76□□□□□ -2.29
CCDC60Q8IWA6 SNORD77.3-201ENST00000391113 65 ntBASIC0.76□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.626-201ENST00000411288 95 ntBASIC0.76□□□□□ -2.29
CCDC60Q8IWA6 U7.7-201ENST00000459276 60 ntBASIC0.76□□□□□ -2.29
CCDC60Q8IWA6 snoU13.21-201ENST00000459368 105 ntBASIC0.76□□□□□ -2.29
CCDC60Q8IWA6 RNU7-96P-201ENST00000459535 64 ntBASIC0.76□□□□□ -2.29
CCDC60Q8IWA6 RNU6-998P-201ENST00000515894 101 ntBASIC0.76□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.797-201ENST00000515977 94 ntBASIC0.76□□□□□ -2.29
CCDC60Q8IWA6 MIR4264-201ENST00000583520 66 ntBASIC0.76□□□□□ -2.29
CCDC60Q8IWA6 AC023934.1-201ENST00000574529 2389 ntBASIC0.76□□□□□ -2.29
CCDC60Q8IWA6 MIR377-201ENST00000362145 69 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 MIR1-1-201ENST00000362147 71 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 SNORA1.1-201ENST00000364671 133 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 SNORA20.1-201ENST00000364790 130 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.307-201ENST00000365022 117 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.478-201ENST00000384358 107 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 SNORD38B-201ENST00000384690 67 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 RNU6-578P-201ENST00000390980 103 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 MIR548I3-201ENST00000408378 149 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 RNU6-1190P-201ENST00000410811 104 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 SNORD83.1-201ENST00000411362 77 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 AL606490.4-201ENST00000423117 127 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 RNU7-62P-201ENST00000458856 62 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 MIR3149-201ENST00000584629 83 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 SNORD38B-202ENST00000625943 69 ntBASIC0.75□□□□□ -2.29
CCDC60Q8IWA6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CCDC60Q8IWA6 MIR302B-201ENST00000362188 73 ntBASIC0.74□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.182-201ENST00000363880 111 ntBASIC0.74□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.447-201ENST00000384184 113 ntBASIC0.74□□□□□ -2.29
CCDC60Q8IWA6 AC006461.1-201ENST00000412637 326 ntBASIC0.74□□□□□ -2.29
CCDC60Q8IWA6 AC244023.1-201ENST00000426884 112 ntBASIC0.74□□□□□ -2.29
CCDC60Q8IWA6 AC015818.7-201ENST00000428754 109 ntBASIC0.74□□□□□ -2.29
CCDC60Q8IWA6 AC087499.7-201ENST00000441958 109 ntBASIC0.74□□□□□ -2.29
CCDC60Q8IWA6 RNU6-1110P-201ENST00000516462 101 ntBASIC0.74□□□□□ -2.29
CCDC60Q8IWA6 RNU6-111P-201ENST00000517179 105 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms