Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 Y_RNA.665-201ENST00000516177 98 ntBASIC-2.86□□□□□ -2.87
LINC00643Q86TS7 RNU6-412P-201ENST00000516434 106 ntBASIC-2.86□□□□□ -2.87
LINC00643Q86TS7 AC018638.8-201ENST00000588755 281 ntBASIC-2.86□□□□□ -2.87
LINC00643Q86TS7 AL445584.3-201ENST00000617173 78 ntBASIC-2.86□□□□□ -2.87
LINC00643Q86TS7 Y_RNA.27-201ENST00000362540 103 ntBASIC-2.87□□□□□ -2.87
LINC00643Q86TS7 MIR548A2-201ENST00000384956 97 ntBASIC-2.87□□□□□ -2.87
LINC00643Q86TS7 ACA59.1-201ENST00000515966 143 ntBASIC-2.87□□□□□ -2.87
LINC00643Q86TS7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-2.87□□□□□ -2.87
LINC00643Q86TS7 RNU6-710P-201ENST00000410424 105 ntBASIC-2.88□□□□□ -2.87
LINC00643Q86TS7 AC100767.1-201ENST00000528178 123 ntBASIC-2.88□□□□□ -2.87
LINC00643Q86TS7 MIR6874-201ENST00000635894 71 ntBASIC-2.88□□□□□ -2.87
LINC00643Q86TS7 Y_RNA.101-201ENST00000363154 102 ntBASIC-2.89□□□□□ -2.87
LINC00643Q86TS7 RNU6-746P-201ENST00000384112 109 ntBASIC-2.89□□□□□ -2.87
LINC00643Q86TS7 SNORD63B-201ENST00000411005 70 ntBASIC-2.89□□□□□ -2.87
LINC00643Q86TS7 SNORA19.2-201ENST00000516013 114 ntBASIC-2.89□□□□□ -2.87
LINC00643Q86TS7 RNU7-35P-201ENST00000517174 62 ntBASIC-2.89□□□□□ -2.87
LINC00643Q86TS7 AC024909.2-201ENST00000553035 286 ntBASIC-2.89□□□□□ -2.87
LINC00643Q86TS7 MIR6773-201ENST00000612812 74 ntBASIC-2.89□□□□□ -2.87
LINC00643Q86TS7 AL669831.3-213ENST00000636676 183 ntBASIC-2.89□□□□□ -2.87
LINC00643Q86TS7 Y_RNA.358-201ENST00000365491 99 ntBASIC-2.9□□□□□ -2.87
LINC00643Q86TS7 Y_RNA.456-201ENST00000384232 111 ntBASIC-2.9□□□□□ -2.87
LINC00643Q86TS7 RNA5SP86-201ENST00000390869 98 ntBASIC-2.9□□□□□ -2.87
LINC00643Q86TS7 MIR548I2-201ENST00000408348 149 ntBASIC-2.9□□□□□ -2.87
LINC00643Q86TS7 RNU6-287P-201ENST00000516230 98 ntBASIC-2.9□□□□□ -2.87
LINC00643Q86TS7 AC092747.3-201ENST00000603769 301 ntBASIC-2.9□□□□□ -2.87
LINC00643Q86TS7 MIR198-201ENST00000637333 62 ntBASIC-2.9□□□□□ -2.87
LINC00643Q86TS7 SNORA2.1-201ENST00000363089 137 ntBASIC-2.91□□□□□ -2.88
LINC00643Q86TS7 RNU5E-5P-201ENST00000365379 116 ntBASIC-2.91□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.351-201ENST00000365436 96 ntBASIC-2.91□□□□□ -2.88
LINC00643Q86TS7 RNU6-1189P-201ENST00000383958 107 ntBASIC-2.91□□□□□ -2.88
LINC00643Q86TS7 MIRLET7B-201ENST00000385140 83 ntBASIC-2.91□□□□□ -2.88
LINC00643Q86TS7 RNA5SP266-201ENST00000410273 108 ntBASIC-2.91□□□□□ -2.88
LINC00643Q86TS7 MTATP6P20-201ENST00000414147 562 ntBASIC-2.91□□□□□ -2.88
LINC00643Q86TS7 BX295541.1-201ENST00000417774 250 ntBASIC-2.91□□□□□ -2.88
LINC00643Q86TS7 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-2.91□□□□□ -2.88
LINC00643Q86TS7 UBE2V1P7-201ENST00000446395 340 ntBASIC-2.91□□□□□ -2.88
LINC00643Q86TS7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-2.91□□□□□ -2.88
LINC00643Q86TS7 AC092954.2-201ENST00000609103 430 ntBASIC-2.91□□□□□ -2.88
LINC00643Q86TS7 RNU6-82P-201ENST00000363970 107 ntBASIC-2.92□□□□□ -2.88
LINC00643Q86TS7 MTCYBP8-201ENST00000422855 651 ntBASIC-2.92□□□□□ -2.88
LINC00643Q86TS7 MTATP6P13-201ENST00000438531 667 ntBASIC-2.92□□□□□ -2.88
LINC00643Q86TS7 RNU6-408P-201ENST00000515910 100 ntBASIC-2.92□□□□□ -2.88
LINC00643Q86TS7 MIR376A2-201ENST00000636782 80 ntBASIC-2.92□□□□□ -2.88
LINC00643Q86TS7 SNORD18.1-201ENST00000363807 70 ntBASIC-2.93□□□□□ -2.88
LINC00643Q86TS7 RNU6-164P-201ENST00000364604 103 ntBASIC-2.93□□□□□ -2.88
LINC00643Q86TS7 RNY4P34-201ENST00000364779 95 ntBASIC-2.93□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.437-201ENST00000384113 113 ntBASIC-2.93□□□□□ -2.88
LINC00643Q86TS7 SNORA36B-201ENST00000410438 131 ntBASIC-2.93□□□□□ -2.88
LINC00643Q86TS7 AF228730.3-201ENST00000436691 102 ntBASIC-2.93□□□□□ -2.88
LINC00643Q86TS7 RNU6-1170P-201ENST00000515974 106 ntBASIC-2.93□□□□□ -2.88
LINC00643Q86TS7 RNU6-983P-201ENST00000516004 103 ntBASIC-2.93□□□□□ -2.88
LINC00643Q86TS7 SNORD63.1-201ENST00000516178 80 ntBASIC-2.93□□□□□ -2.88
LINC00643Q86TS7 RNU7-137P-201ENST00000516788 62 ntBASIC-2.93□□□□□ -2.88
LINC00643Q86TS7 AP002963.1-201ENST00000530590 184 ntBASIC-2.93□□□□□ -2.88
LINC00643Q86TS7 MIR4441-201ENST00000582623 100 ntBASIC-2.93□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.215-201ENST00000364204 112 ntBASIC-2.94□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.490-201ENST00000384413 102 ntBASIC-2.94□□□□□ -2.88
LINC00643Q86TS7 RNU6-466P-201ENST00000391224 103 ntBASIC-2.94□□□□□ -2.88
LINC00643Q86TS7 RNU6-155P-201ENST00000516347 100 ntBASIC-2.94□□□□□ -2.88
LINC00643Q86TS7 MIR4500-201ENST00000579472 76 ntBASIC-2.94□□□□□ -2.88
LINC00643Q86TS7 AC060780.3-201ENST00000589464 80 ntBASIC-2.94□□□□□ -2.88
LINC00643Q86TS7 AC112487.2-201ENST00000637950 304 ntBASIC-2.94□□□□□ -2.88
LINC00643Q86TS7 MIR365A-201ENST00000362260 87 ntBASIC-2.95□□□□□ -2.88
LINC00643Q86TS7 RNU4-80P-201ENST00000363200 141 ntBASIC-2.95□□□□□ -2.88
LINC00643Q86TS7 SNORD115-33-201ENST00000363723 82 ntBASIC-2.95□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.328-201ENST00000365208 113 ntBASIC-2.95□□□□□ -2.88
LINC00643Q86TS7 SNORD61-201ENST00000384252 73 ntBASIC-2.95□□□□□ -2.88
LINC00643Q86TS7 RNU6-318P-201ENST00000384283 103 ntBASIC-2.95□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.95□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.562-201ENST00000384695 113 ntBASIC-2.95□□□□□ -2.88
LINC00643Q86TS7 SNORA53-201ENST00000391141 249 ntBASIC-2.95□□□□□ -2.88
LINC00643Q86TS7 RNU6-195P-201ENST00000411352 109 ntBASIC-2.95□□□□□ -2.88
LINC00643Q86TS7 AF228730.4-201ENST00000421457 183 ntBASIC-2.95□□□□□ -2.88
LINC00643Q86TS7 RNU6-158P-201ENST00000517104 100 ntBASIC-2.95□□□□□ -2.88
LINC00643Q86TS7 RNU6-1270P-201ENST00000517128 108 ntBASIC-2.95□□□□□ -2.88
LINC00643Q86TS7 RNU6-595P-201ENST00000363944 107 ntBASIC-2.96□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.96□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.533-201ENST00000384596 114 ntBASIC-2.96□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.572-201ENST00000384757 98 ntBASIC-2.96□□□□□ -2.88
LINC00643Q86TS7 AL590004.1-201ENST00000405321 300 ntBASIC-2.96□□□□□ -2.88
LINC00643Q86TS7 AL606923.1-201ENST00000406616 190 ntBASIC-2.96□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.601-201ENST00000410500 113 ntBASIC-2.96□□□□□ -2.88
LINC00643Q86TS7 MTCO2P21-201ENST00000419780 677 ntBASIC-2.96□□□□□ -2.88
LINC00643Q86TS7 AL356010.1-201ENST00000456364 102 ntBASIC-2.96□□□□□ -2.88
LINC00643Q86TS7 RNU7-80P-201ENST00000459562 61 ntBASIC-2.96□□□□□ -2.88
LINC00643Q86TS7 MIR4424-201ENST00000585257 86 ntBASIC-2.96□□□□□ -2.88
LINC00643Q86TS7 DLEU2_5.1-201ENST00000615567 84 ntBASIC-2.96□□□□□ -2.88
LINC00643Q86TS7 AC021613.1-201ENST00000623880 111 ntBASIC-2.96□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.97□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.239-201ENST00000364444 113 ntBASIC-2.97□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.353-201ENST00000365440 108 ntBASIC-2.97□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.486-201ENST00000384398 107 ntBASIC-2.97□□□□□ -2.88
LINC00643Q86TS7 SNORA26.4-201ENST00000391188 123 ntBASIC-2.97□□□□□ -2.88
LINC00643Q86TS7 Y_RNA.631-201ENST00000459607 101 ntBASIC-2.97□□□□□ -2.88
LINC00643Q86TS7 MIR3682-201ENST00000581338 84 ntBASIC-2.97□□□□□ -2.88
LINC00643Q86TS7 RNU6-1192P-201ENST00000612197 107 ntBASIC-2.97□□□□□ -2.88
LINC00643Q86TS7 RNU6-489P-201ENST00000618289 107 ntBASIC-2.97□□□□□ -2.88
LINC00643Q86TS7 MIR7111-201ENST00000619751 72 ntBASIC-2.97□□□□□ -2.88
LINC00643Q86TS7 AC091932.4-201ENST00000623386 200 ntBASIC-2.97□□□□□ -2.88
LINC00643Q86TS7 RNU6-208P-201ENST00000362431 107 ntBASIC-2.98□□□□□ -2.89
Retrieved 100 of 98,524 protein–RNA pairs in 190.4 ms