Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 RNU6-455P-201ENST00000384681 107 ntBASIC-1.19□□□□□ -2.6
USP54Q70EL1 AC010655.3-201ENST00000478818 450 ntBASIC-1.19□□□□□ -2.6
USP54Q70EL1 AC011373.1-201ENST00000607270 237 ntBASIC-1.19□□□□□ -2.6
USP54Q70EL1 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.2□□□□□ -2.6
USP54Q70EL1 RNU4-70P-201ENST00000384579 139 ntBASIC-1.2□□□□□ -2.6
USP54Q70EL1 SNORA26.8-201ENST00000391306 124 ntBASIC-1.2□□□□□ -2.6
USP54Q70EL1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.2□□□□□ -2.6
USP54Q70EL1 SNORA13-201ENST00000458790 133 ntBASIC-1.2□□□□□ -2.6
USP54Q70EL1 RNU7-104P-201ENST00000459398 79 ntBASIC-1.2□□□□□ -2.6
USP54Q70EL1 RNU6-566P-201ENST00000516790 107 ntBASIC-1.2□□□□□ -2.6
USP54Q70EL1 MIR4499-201ENST00000584834 69 ntBASIC-1.2□□□□□ -2.6
USP54Q70EL1 RNU6-874P-201ENST00000362390 105 ntBASIC-1.2□□□□□ -2.6
USP54Q70EL1 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.2□□□□□ -2.6
USP54Q70EL1 RNU6-306P-201ENST00000384617 107 ntBASIC-1.2□□□□□ -2.6
USP54Q70EL1 MIR626-201ENST00000385032 94 ntBASIC-1.2□□□□□ -2.6
USP54Q70EL1 MTND4P28-201ENST00000426217 387 ntBASIC-1.2□□□□□ -2.6
USP54Q70EL1 MIR6128-201ENST00000615528 109 ntBASIC-1.2□□□□□ -2.6
USP54Q70EL1 RNA5SP403-201ENST00000363598 108 ntBASIC-1.21□□□□□ -2.6
USP54Q70EL1 RNU6-597P-201ENST00000365620 102 ntBASIC-1.21□□□□□ -2.6
USP54Q70EL1 SNORA69.1-201ENST00000390904 137 ntBASIC-1.21□□□□□ -2.6
USP54Q70EL1 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.21□□□□□ -2.6
USP54Q70EL1 MIR2053-201ENST00000459295 91 ntBASIC-1.21□□□□□ -2.6
USP54Q70EL1 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.21□□□□□ -2.6
USP54Q70EL1 RNU6-274P-201ENST00000459566 107 ntBASIC-1.21□□□□□ -2.6
USP54Q70EL1 RNU6-365P-201ENST00000517113 106 ntBASIC-1.21□□□□□ -2.6
USP54Q70EL1 MIR548H5-201ENST00000580314 60 ntBASIC-1.21□□□□□ -2.6
USP54Q70EL1 AC005899.2-201ENST00000584353 90 ntBASIC-1.21□□□□□ -2.6
USP54Q70EL1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.21□□□□□ -2.6
USP54Q70EL1 RNA5SP133-201ENST00000363368 119 ntBASIC-1.22□□□□□ -2.6
USP54Q70EL1 RNU6-449P-201ENST00000383914 107 ntBASIC-1.22□□□□□ -2.6
USP54Q70EL1 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.22□□□□□ -2.6
USP54Q70EL1 RNU7-141P-201ENST00000459304 62 ntBASIC-1.22□□□□□ -2.6
USP54Q70EL1 RNU7-79P-201ENST00000516082 62 ntBASIC-1.22□□□□□ -2.6
USP54Q70EL1 RNU6-126P-201ENST00000516685 103 ntBASIC-1.22□□□□□ -2.6
USP54Q70EL1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.22□□□□□ -2.6
USP54Q70EL1 AC092794.2-201ENST00000620933 563 ntBASIC-1.22□□□□□ -2.6
USP54Q70EL1 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.23□□□□□ -2.61
USP54Q70EL1 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.23□□□□□ -2.61
USP54Q70EL1 AL500527.2-201ENST00000454105 95 ntBASIC-1.23□□□□□ -2.61
USP54Q70EL1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.23□□□□□ -2.61
USP54Q70EL1 RNU6-175P-201ENST00000516896 107 ntBASIC-1.23□□□□□ -2.61
USP54Q70EL1 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.23□□□□□ -2.61
USP54Q70EL1 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.23□□□□□ -2.61
USP54Q70EL1 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.23□□□□□ -2.61
USP54Q70EL1 MIR518B-201ENST00000385127 83 ntBASIC-1.23□□□□□ -2.61
USP54Q70EL1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.23□□□□□ -2.61
USP54Q70EL1 RNU7-66P-201ENST00000459469 62 ntBASIC-1.23□□□□□ -2.61
USP54Q70EL1 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.23□□□□□ -2.61
USP54Q70EL1 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.23□□□□□ -2.61
USP54Q70EL1 RNA5SP169-201ENST00000517268 117 ntBASIC-1.23□□□□□ -2.61
USP54Q70EL1 RNU7-10P-201ENST00000607194 63 ntBASIC-1.23□□□□□ -2.61
USP54Q70EL1 AC124864.2-201ENST00000624736 186 ntBASIC-1.23□□□□□ -2.61
USP54Q70EL1 MIR20A-201ENST00000362279 71 ntBASIC-1.24□□□□□ -2.61
USP54Q70EL1 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.24□□□□□ -2.61
USP54Q70EL1 RNU6-900P-201ENST00000384498 102 ntBASIC-1.24□□□□□ -2.61
USP54Q70EL1 RNU6-429P-201ENST00000384582 108 ntBASIC-1.24□□□□□ -2.61
USP54Q70EL1 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.24□□□□□ -2.61
USP54Q70EL1 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.24□□□□□ -2.61
USP54Q70EL1 RNU6-706P-201ENST00000517229 104 ntBASIC-1.24□□□□□ -2.61
USP54Q70EL1 AC060788.1-201ENST00000521318 469 ntBASIC-1.24□□□□□ -2.61
USP54Q70EL1 RN7SKP299-201ENST00000606679 301 ntBASIC-1.24□□□□□ -2.61
USP54Q70EL1 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.24□□□□□ -2.61
USP54Q70EL1 uc_338.19-201ENST00000616808 99 ntBASIC-1.24□□□□□ -2.61
USP54Q70EL1 AC069503.3-201ENST00000618674 145 ntBASIC-1.24□□□□□ -2.61
USP54Q70EL1 RNU1-141P-201ENST00000364623 158 ntBASIC-1.25□□□□□ -2.61
USP54Q70EL1 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.25□□□□□ -2.61
USP54Q70EL1 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.25□□□□□ -2.61
USP54Q70EL1 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.25□□□□□ -2.61
USP54Q70EL1 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.25□□□□□ -2.61
USP54Q70EL1 RNY3P4-201ENST00000384428 101 ntBASIC-1.25□□□□□ -2.61
USP54Q70EL1 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.25□□□□□ -2.61
USP54Q70EL1 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.25□□□□□ -2.61
USP54Q70EL1 RNU6-893P-201ENST00000458841 100 ntBASIC-1.25□□□□□ -2.61
USP54Q70EL1 RNA5SP484-201ENST00000458857 111 ntBASIC-1.25□□□□□ -2.61
USP54Q70EL1 RNU7-80P-201ENST00000459562 61 ntBASIC-1.25□□□□□ -2.61
USP54Q70EL1 AL162413.1-201ENST00000603198 110 ntBASIC-1.25□□□□□ -2.61
USP54Q70EL1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.25□□□□□ -2.61
USP54Q70EL1 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 MIR9-2-201ENST00000384838 87 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 MIR4662B-201ENST00000579498 81 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 MIR548A2-201ENST00000384956 97 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 AL160004.2-201ENST00000432935 350 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 SEPT14P3-201ENST00000439401 183 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 AL732372.2-207ENST00000445840 183 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 AC098826.2-201ENST00000452011 651 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 SEPT14P2-201ENST00000453405 183 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.26□□□□□ -2.61
USP54Q70EL1 SEPT14P4-201ENST00000513445 186 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 SNORD36C-201ENST00000516733 66 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 FO082796.1-201ENST00000523795 183 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 AP000720.1-201ENST00000625091 483 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 MIR6863-201ENST00000636112 90 ntBASIC-1.26□□□□□ -2.61
USP54Q70EL1 SNORD61-201ENST00000384252 73 ntBASIC-1.27□□□□□ -2.61
USP54Q70EL1 RNU6-835P-201ENST00000516974 104 ntBASIC-1.27□□□□□ -2.61
USP54Q70EL1 NBR2-204ENST00000587322 63 ntBASIC-1.27□□□□□ -2.61
USP54Q70EL1 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.28□□□□□ -2.61
USP54Q70EL1 RNU4-36P-201ENST00000364294 144 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 300.4 ms