Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AP003072.1-201ENST00000531740 145 ntBASIC0.31□□□□□ -2.36
SMARCD3Q6STE5 AL442663.2-201ENST00000554385 511 ntBASIC0.31□□□□□ -2.36
SMARCD3Q6STE5 MIR4662B-201ENST00000579498 81 ntBASIC0.31□□□□□ -2.36
SMARCD3Q6STE5 MIR4804-201ENST00000581683 73 ntBASIC0.31□□□□□ -2.36
SMARCD3Q6STE5 MIR4676-201ENST00000583078 72 ntBASIC0.31□□□□□ -2.36
SMARCD3Q6STE5 MIR4264-201ENST00000583520 66 ntBASIC0.31□□□□□ -2.36
SMARCD3Q6STE5 AC243829.6-201ENST00000612652 106 ntBASIC0.31□□□□□ -2.36
SMARCD3Q6STE5 AL136317.1-201ENST00000612653 226 ntBASIC0.31□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.23-201ENST00000362496 106 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.118-201ENST00000363300 101 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 RNY1-201ENST00000364228 113 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.304-201ENST00000365011 112 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 SNORD38B-201ENST00000384690 67 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 MIR598-201ENST00000384868 97 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 RNU7-73P-201ENST00000458743 63 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 RNU2-11P-201ENST00000459191 187 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 RPS29P24-201ENST00000486345 171 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 RNU6-1299P-201ENST00000516316 100 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 RNU6-504P-201ENST00000516568 104 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 AC008608.1-201ENST00000603910 127 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 AL365265.1-201ENST00000621045 234 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 SNORD38B-202ENST00000625943 69 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 Z97988.1-201ENST00000637697 135 ntBASIC0.3□□□□□ -2.36
SMARCD3Q6STE5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.199-201ENST00000364014 102 ntBASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 RNU6-597P-201ENST00000365620 102 ntBASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 SNORD24-201ENST00000383884 75 ntBASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.440-201ENST00000384120 114 ntBASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 RNU6-472P-201ENST00000384299 107 ntBASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 MIR588-201ENST00000384900 83 ntBASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 MIR573-201ENST00000384964 99 ntBASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 SNORD77.3-201ENST00000391113 65 ntBASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 RNU2-70P-201ENST00000410718 179 ntBASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 RNU7-56P-201ENST00000458744 62 ntBASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 SNORD2.1-201ENST00000458762 69 ntBASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 RNY3P16-201ENST00000516338 101 ntBASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 MIR5688-201ENST00000580619 83 ntBASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 U2.14-201ENST00000615943 113 ntBASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.29□□□□□ -2.36
SMARCD3Q6STE5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.82-201ENST00000363000 102 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.92-201ENST00000363043 102 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.235-201ENST00000364412 102 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 SNORA1.1-201ENST00000364671 133 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.306-201ENST00000365015 102 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.312-201ENST00000365089 102 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.322-201ENST00000365151 102 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.396-201ENST00000383949 103 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.432-201ENST00000384087 111 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.461-201ENST00000384263 103 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 RNU6-713P-201ENST00000384761 107 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 RNU6-1237P-201ENST00000384777 107 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.590-201ENST00000410140 107 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 RNU6-177P-201ENST00000411257 104 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.650-201ENST00000459002 102 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 RNU6-998P-201ENST00000515894 101 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.777-201ENST00000516982 102 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.720-201ENST00000517166 92 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 MIR3612-201ENST00000579753 87 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.771-201ENST00000598668 102 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 MIR8062-201ENST00000621515 85 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 Y_RNA.789-201ENST00000622480 102 ntBASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.28□□□□□ -2.36
SMARCD3Q6STE5 MIR18A-201ENST00000362310 71 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 Y_RNA.76-201ENST00000362931 109 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 RNU6-653P-201ENST00000363074 106 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 Y_RNA.277-201ENST00000364754 102 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 Y_RNA.326-201ENST00000365176 113 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 RNU6-1189P-201ENST00000383958 107 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 MIR616-201ENST00000385293 97 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 SNORA26.6-201ENST00000391256 115 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 MIR548I3-201ENST00000408378 149 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 RNU6-1165P-201ENST00000410119 107 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 snoU13.2-201ENST00000459201 104 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 Y_RNA.679-201ENST00000516416 91 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 RNU7-53P-201ENST00000516705 60 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 MIR3129-201ENST00000581095 76 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 MIR4282-201ENST00000583613 67 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 AL162730.1-201ENST00000605734 292 ntBASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SMARCD3Q6STE5 MIR335-201ENST00000362173 94 ntBASIC0.26□□□□□ -2.37
SMARCD3Q6STE5 Y_RNA.54-201ENST00000362766 105 ntBASIC0.26□□□□□ -2.37
SMARCD3Q6STE5 SNORA63C-201ENST00000364578 129 ntBASIC0.26□□□□□ -2.37
SMARCD3Q6STE5 Y_RNA.351-201ENST00000365436 96 ntBASIC0.26□□□□□ -2.37
SMARCD3Q6STE5 MIR140-201ENST00000385282 100 ntBASIC0.26□□□□□ -2.37
SMARCD3Q6STE5 RNU6-381P-201ENST00000391259 108 ntBASIC0.26□□□□□ -2.37
SMARCD3Q6STE5 MIR938-201ENST00000401216 83 ntBASIC0.26□□□□□ -2.37
SMARCD3Q6STE5 MIR1302-6-201ENST00000408466 90 ntBASIC0.26□□□□□ -2.37
SMARCD3Q6STE5 RNU7-185P-201ENST00000459215 60 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms