Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 RNU6-504P-201ENST00000516568 104 ntBASIC0.66□□□□□ -2.3
SNRNP48Q6IEG0 RNU6-126P-201ENST00000516685 103 ntBASIC0.66□□□□□ -2.3
SNRNP48Q6IEG0 MIR8062-201ENST00000621515 85 ntBASIC0.66□□□□□ -2.3
SNRNP48Q6IEG0 MIR6086-201ENST00000638065 55 ntBASIC0.66□□□□□ -2.3
SNRNP48Q6IEG0 MIR335-201ENST00000362173 94 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 RNU6-369P-201ENST00000362515 102 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.66-201ENST00000362862 102 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.82-201ENST00000363000 102 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.91-201ENST00000363042 107 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.92-201ENST00000363043 102 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 snoU2_19.4-201ENST00000364329 80 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.235-201ENST00000364412 102 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.306-201ENST00000365015 102 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.312-201ENST00000365089 102 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.322-201ENST00000365151 102 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 SNORA27-201ENST00000384323 126 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.483-201ENST00000384380 101 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 SNORD105-201ENST00000386910 85 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 AC092628.1-201ENST00000436250 252 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 AF228730.3-201ENST00000436691 102 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 SNRPGP8-201ENST00000454064 226 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.650-201ENST00000459002 102 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 RNU6-453P-201ENST00000516819 85 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.777-201ENST00000516982 102 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 MIR4264-201ENST00000583520 66 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 AC006504.6-201ENST00000590142 199 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.771-201ENST00000598668 102 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 MIR8055-201ENST00000610739 97 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.789-201ENST00000622480 102 ntBASIC0.65□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.274-201ENST00000364714 101 ntBASIC0.64□□□□□ -2.31
SNRNP48Q6IEG0 RNU6-484P-201ENST00000384016 107 ntBASIC0.64□□□□□ -2.31
SNRNP48Q6IEG0 RNU6-1160P-201ENST00000384546 104 ntBASIC0.64□□□□□ -2.31
SNRNP48Q6IEG0 MIR1302-6-201ENST00000408466 90 ntBASIC0.64□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.622-201ENST00000411091 108 ntBASIC0.64□□□□□ -2.31
SNRNP48Q6IEG0 RNU2-55P-201ENST00000411146 174 ntBASIC0.64□□□□□ -2.31
SNRNP48Q6IEG0 RNU7-73P-201ENST00000458743 63 ntBASIC0.64□□□□□ -2.31
SNRNP48Q6IEG0 RNU6-229P-201ENST00000516614 102 ntBASIC0.64□□□□□ -2.31
SNRNP48Q6IEG0 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
SNRNP48Q6IEG0 MIR2909-201ENST00000617113 69 ntBASIC0.64□□□□□ -2.31
SNRNP48Q6IEG0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.634-201ENST00000364811 113 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 RNU6-934P-201ENST00000365154 107 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.412-201ENST00000384001 104 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 RNY3P5-201ENST00000384127 102 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.461-201ENST00000384263 103 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 RNU6-110P-201ENST00000384508 104 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 AL606845.1-201ENST00000404881 255 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.590-201ENST00000410140 107 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 RNU2-70P-201ENST00000410718 179 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 SNORD83.1-201ENST00000411362 77 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 AC244098.3-201ENST00000424803 96 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 RPS29P24-201ENST00000486345 171 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 AC011195.1-201ENST00000578177 177 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 MIR4282-201ENST00000583613 67 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 AL365265.1-201ENST00000621045 234 ntBASIC0.63□□□□□ -2.31
SNRNP48Q6IEG0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.62□□□□□ -2.31
SNRNP48Q6IEG0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.432-201ENST00000384087 111 ntBASIC0.62□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.574-201ENST00000384766 95 ntBASIC0.62□□□□□ -2.31
SNRNP48Q6IEG0 MIR616-201ENST00000385293 97 ntBASIC0.62□□□□□ -2.31
SNRNP48Q6IEG0 RNU1-119P-201ENST00000391122 165 ntBASIC0.62□□□□□ -2.31
SNRNP48Q6IEG0 SNORA26-201ENST00000391286 122 ntBASIC0.62□□□□□ -2.31
SNRNP48Q6IEG0 AC015818.7-201ENST00000428754 109 ntBASIC0.62□□□□□ -2.31
SNRNP48Q6IEG0 AC087499.7-201ENST00000441958 109 ntBASIC0.62□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.679-201ENST00000516416 91 ntBASIC0.62□□□□□ -2.31
SNRNP48Q6IEG0 RNU7-53P-201ENST00000516705 60 ntBASIC0.62□□□□□ -2.31
SNRNP48Q6IEG0 AL442663.2-201ENST00000554385 511 ntBASIC0.62□□□□□ -2.31
SNRNP48Q6IEG0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.62□□□□□ -2.31
SNRNP48Q6IEG0 SNORA63C-201ENST00000364578 129 ntBASIC0.61□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.304-201ENST00000365011 112 ntBASIC0.61□□□□□ -2.31
SNRNP48Q6IEG0 RNU6-472P-201ENST00000384299 107 ntBASIC0.61□□□□□ -2.31
SNRNP48Q6IEG0 SNORD38B-201ENST00000384690 67 ntBASIC0.61□□□□□ -2.31
SNRNP48Q6IEG0 MIR606-201ENST00000384851 96 ntBASIC0.61□□□□□ -2.31
SNRNP48Q6IEG0 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
SNRNP48Q6IEG0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.61□□□□□ -2.31
SNRNP48Q6IEG0 MIR548F4-201ENST00000408515 105 ntBASIC0.61□□□□□ -2.31
SNRNP48Q6IEG0 RNA5SP153-201ENST00000516498 76 ntBASIC0.61□□□□□ -2.31
SNRNP48Q6IEG0 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
SNRNP48Q6IEG0 SNORD38B-202ENST00000625943 69 ntBASIC0.61□□□□□ -2.31
SNRNP48Q6IEG0 Z97988.1-201ENST00000637697 135 ntBASIC0.61□□□□□ -2.31
SNRNP48Q6IEG0 U6.104-201ENST00000637979 90 ntBASIC0.61□□□□□ -2.31
SNRNP48Q6IEG0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.199-201ENST00000364014 102 ntBASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.416-201ENST00000384014 113 ntBASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.518-201ENST00000384552 113 ntBASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 RNU6-1228P-201ENST00000391014 107 ntBASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 AL138752.1-201ENST00000452964 351 ntBASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 RNU7-62P-201ENST00000458856 62 ntBASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 SNORA62.5-201ENST00000516634 120 ntBASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 MIR4643-201ENST00000577473 78 ntBASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 MIR4771-2-201ENST00000577758 74 ntBASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 MIR4771-1-201ENST00000582617 74 ntBASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 AC097639.2-201ENST00000603159 172 ntBASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.812-201ENST00000610788 101 ntBASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 uc_338.6-201ENST00000613544 171 ntBASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.784-201ENST00000613803 101 ntBASIC0.6□□□□□ -2.31
SNRNP48Q6IEG0 Y_RNA.787-201ENST00000616522 101 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms