Protein–RNA interactions for Protein: Q08ER8

ZNF543, Zinc finger protein 543, humanhuman

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543Q08ER8 RNU4-84P-201ENST00000364200 139 ntBASIC1.35□□□□□ -2.19
ZNF543Q08ER8 RNU6-396P-201ENST00000365369 105 ntBASIC1.35□□□□□ -2.19
ZNF543Q08ER8 Y_RNA.351-201ENST00000365436 96 ntBASIC1.35□□□□□ -2.19
ZNF543Q08ER8 MIR2115-201ENST00000516657 100 ntBASIC1.35□□□□□ -2.19
ZNF543Q08ER8 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.35□□□□□ -2.19
ZNF543Q08ER8 SEPT14P17-201ENST00000617978 177 ntBASIC1.35□□□□□ -2.19
ZNF543Q08ER8 Y_RNA.441-201ENST00000384123 112 ntBASIC1.34□□□□□ -2.19
ZNF543Q08ER8 MIR1185-1-201ENST00000408598 86 ntBASIC1.34□□□□□ -2.19
ZNF543Q08ER8 MRPL35P3-201ENST00000421557 364 ntBASIC1.34□□□□□ -2.19
ZNF543Q08ER8 RNU7-90P-201ENST00000459216 62 ntBASIC1.34□□□□□ -2.19
ZNF543Q08ER8 RNU7-40P-201ENST00000516397 64 ntBASIC1.34□□□□□ -2.19
ZNF543Q08ER8 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.34□□□□□ -2.19
ZNF543Q08ER8 MIR3646-201ENST00000578301 84 ntBASIC1.34□□□□□ -2.19
ZNF543Q08ER8 MIR548AO-201ENST00000579992 96 ntBASIC1.34□□□□□ -2.19
ZNF543Q08ER8 AC027335.2-201ENST00000624030 375 ntBASIC1.34□□□□□ -2.19
ZNF543Q08ER8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
ZNF543Q08ER8 Y_RNA.270-201ENST00000364693 104 ntBASIC1.33□□□□□ -2.2
ZNF543Q08ER8 Y_RNA.363-201ENST00000365529 113 ntBASIC1.33□□□□□ -2.2
ZNF543Q08ER8 MIR618-201ENST00000385287 98 ntBASIC1.33□□□□□ -2.2
ZNF543Q08ER8 RNU6-1135P-201ENST00000411083 103 ntBASIC1.33□□□□□ -2.2
ZNF543Q08ER8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.33□□□□□ -2.2
ZNF543Q08ER8 AL392103.1-201ENST00000447000 198 ntBASIC1.33□□□□□ -2.2
ZNF543Q08ER8 RNU7-21P-201ENST00000459430 62 ntBASIC1.33□□□□□ -2.2
ZNF543Q08ER8 MIR342-201ENST00000362212 99 ntBASIC1.32□□□□□ -2.2
ZNF543Q08ER8 RNU6-768P-201ENST00000384683 107 ntBASIC1.32□□□□□ -2.2
ZNF543Q08ER8 SNORA75.2-201ENST00000391138 150 ntBASIC1.32□□□□□ -2.2
ZNF543Q08ER8 SNORA75.3-201ENST00000391231 150 ntBASIC1.32□□□□□ -2.2
ZNF543Q08ER8 RNA5SP261-201ENST00000410536 106 ntBASIC1.32□□□□□ -2.2
ZNF543Q08ER8 AC063976.4-201ENST00000421971 163 ntBASIC1.32□□□□□ -2.2
ZNF543Q08ER8 RNU2-11P-201ENST00000459191 187 ntBASIC1.32□□□□□ -2.2
ZNF543Q08ER8 RNU7-121P-201ENST00000516604 62 ntBASIC1.32□□□□□ -2.2
ZNF543Q08ER8 MIR6844-201ENST00000637122 62 ntBASIC1.32□□□□□ -2.2
ZNF543Q08ER8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
ZNF543Q08ER8 Y_RNA.330-201ENST00000365230 109 ntBASIC1.31□□□□□ -2.2
ZNF543Q08ER8 SNORA75.5-201ENST00000391291 81 ntBASIC1.31□□□□□ -2.2
ZNF543Q08ER8 MIR1276-201ENST00000408707 83 ntBASIC1.31□□□□□ -2.2
ZNF543Q08ER8 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
ZNF543Q08ER8 RNU2-64P-201ENST00000411315 191 ntBASIC1.31□□□□□ -2.2
ZNF543Q08ER8 RNA5SP102-201ENST00000516865 106 ntBASIC1.31□□□□□ -2.2
ZNF543Q08ER8 MIR3668-201ENST00000582138 75 ntBASIC1.31□□□□□ -2.2
ZNF543Q08ER8 AC098479.1-201ENST00000609225 154 ntBASIC1.31□□□□□ -2.2
ZNF543Q08ER8 MIR376A2-201ENST00000636782 80 ntBASIC1.31□□□□□ -2.2
ZNF543Q08ER8 AC008163.1-202ENST00000636004 2889 ntBASIC1.3□□□□□ -2.2
ZNF543Q08ER8 RNU6-818P-201ENST00000364837 108 ntBASIC1.3□□□□□ -2.2
ZNF543Q08ER8 RNU6-939P-201ENST00000384634 107 ntBASIC1.3□□□□□ -2.2
ZNF543Q08ER8 MIR548I3-201ENST00000408378 149 ntBASIC1.3□□□□□ -2.2
ZNF543Q08ER8 MIR1302-7-201ENST00000408841 72 ntBASIC1.3□□□□□ -2.2
ZNF543Q08ER8 AC002429.1-201ENST00000437672 148 ntBASIC1.3□□□□□ -2.2
ZNF543Q08ER8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.3□□□□□ -2.2
ZNF543Q08ER8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.3□□□□□ -2.2
ZNF543Q08ER8 DNAJC19P2-201ENST00000593340 302 ntBASIC1.3□□□□□ -2.2
ZNF543Q08ER8 AP000753.3-201ENST00000604083 169 ntBASIC1.3□□□□□ -2.2
ZNF543Q08ER8 FTX_2.1-201ENST00000618816 94 ntBASIC1.3□□□□□ -2.2
ZNF543Q08ER8 SNORA1.1-201ENST00000364671 133 ntBASIC1.29□□□□□ -2.2
ZNF543Q08ER8 SNORD37.2-201ENST00000391075 66 ntBASIC1.29□□□□□ -2.2
ZNF543Q08ER8 RNU5E-9P-201ENST00000411164 104 ntBASIC1.29□□□□□ -2.2
ZNF543Q08ER8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.29□□□□□ -2.2
ZNF543Q08ER8 MIR6516-201ENST00000630554 81 ntBASIC1.29□□□□□ -2.2
ZNF543Q08ER8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
ZNF543Q08ER8 Y_RNA.272-201ENST00000364696 102 ntBASIC1.28□□□□□ -2.2
ZNF543Q08ER8 RNU1-133P-201ENST00000364867 167 ntBASIC1.28□□□□□ -2.2
ZNF543Q08ER8 SNORD38B-201ENST00000384690 67 ntBASIC1.28□□□□□ -2.2
ZNF543Q08ER8 RNU6-913P-201ENST00000390913 95 ntBASIC1.28□□□□□ -2.2
ZNF543Q08ER8 RNU6-613P-201ENST00000410412 108 ntBASIC1.28□□□□□ -2.2
ZNF543Q08ER8 RNU6-1149P-201ENST00000516810 97 ntBASIC1.28□□□□□ -2.2
ZNF543Q08ER8 RNA5SP404-201ENST00000517118 132 ntBASIC1.28□□□□□ -2.2
ZNF543Q08ER8 AL020996.3-201ENST00000606617 222 ntBASIC1.28□□□□□ -2.2
ZNF543Q08ER8 MIR8055-201ENST00000610739 97 ntBASIC1.28□□□□□ -2.2
ZNF543Q08ER8 SNORD38B-202ENST00000625943 69 ntBASIC1.28□□□□□ -2.2
ZNF543Q08ER8 AL596211.1-201ENST00000569873 2277 ntBASIC1.28□□□□□ -2.2
ZNF543Q08ER8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
ZNF543Q08ER8 MIR96-201ENST00000362288 78 ntBASIC1.27□□□□□ -2.21
ZNF543Q08ER8 RNU1-124P-201ENST00000363861 145 ntBASIC1.27□□□□□ -2.21
ZNF543Q08ER8 Y_RNA.226-201ENST00000364337 114 ntBASIC1.27□□□□□ -2.21
ZNF543Q08ER8 MIR19B1-201ENST00000384829 87 ntBASIC1.27□□□□□ -2.21
ZNF543Q08ER8 MIR150-201ENST00000385048 84 ntBASIC1.27□□□□□ -2.21
ZNF543Q08ER8 MT-TN-201ENST00000387400 73 ntBASIC1.27□□□□□ -2.21
ZNF543Q08ER8 MIR3152-201ENST00000579801 74 ntBASIC1.27□□□□□ -2.21
ZNF543Q08ER8 AC131055.1-201ENST00000584626 316 ntBASIC1.27□□□□□ -2.21
ZNF543Q08ER8 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
ZNF543Q08ER8 AC091932.4-201ENST00000623386 200 ntBASIC1.27□□□□□ -2.21
ZNF543Q08ER8 Z97988.1-201ENST00000637697 135 ntBASIC1.27□□□□□ -2.21
ZNF543Q08ER8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
ZNF543Q08ER8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
ZNF543Q08ER8 SNORA25.9-201ENST00000365087 128 ntBASIC1.26□□□□□ -2.21
ZNF543Q08ER8 Y_RNA.354-201ENST00000365448 111 ntBASIC1.26□□□□□ -2.21
ZNF543Q08ER8 RNA5SP247-201ENST00000411181 105 ntBASIC1.26□□□□□ -2.21
ZNF543Q08ER8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.26□□□□□ -2.21
ZNF543Q08ER8 MIR4264-201ENST00000583520 66 ntBASIC1.26□□□□□ -2.21
ZNF543Q08ER8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.26□□□□□ -2.21
ZNF543Q08ER8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
ZNF543Q08ER8 MTND5P32-201ENST00000560711 1802 ntBASIC1.25□□□□□ -2.21
ZNF543Q08ER8 RNU6-1082P-201ENST00000364574 107 ntBASIC1.25□□□□□ -2.21
ZNF543Q08ER8 RNU6-449P-201ENST00000383914 107 ntBASIC1.25□□□□□ -2.21
ZNF543Q08ER8 RNU6-886P-201ENST00000384319 105 ntBASIC1.25□□□□□ -2.21
ZNF543Q08ER8 MIR200A-201ENST00000384875 90 ntBASIC1.25□□□□□ -2.21
ZNF543Q08ER8 MIR499A-201ENST00000384903 122 ntBASIC1.25□□□□□ -2.21
ZNF543Q08ER8 MTATP6P21-201ENST00000440681 189 ntBASIC1.25□□□□□ -2.21
ZNF543Q08ER8 AC087343.1-201ENST00000477341 475 ntBASIC1.25□□□□□ -2.21
ZNF543Q08ER8 AC074198.2-201ENST00000508153 258 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms