Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC012414.2-201ENST00000559474 187 ntBASIC-3.34□□□□□ -2.94
TFF3Q07654 SNORD115-22-201ENST00000364456 82 ntBASIC-3.35□□□□□ -2.95
TFF3Q07654 RNU6-128P-201ENST00000383976 107 ntBASIC-3.35□□□□□ -2.95
TFF3Q07654 RNU6-481P-201ENST00000384194 107 ntBASIC-3.35□□□□□ -2.95
TFF3Q07654 MIR1284-201ENST00000408337 120 ntBASIC-3.35□□□□□ -2.95
TFF3Q07654 RNU6-938P-201ENST00000411285 103 ntBASIC-3.35□□□□□ -2.95
TFF3Q07654 Y_RNA.809-201ENST00000516058 95 ntBASIC-3.35□□□□□ -2.95
TFF3Q07654 AC080013.3-201ENST00000606839 578 ntBASIC-3.35□□□□□ -2.95
TFF3Q07654 RNU6-462P-201ENST00000362659 105 ntBASIC-3.36□□□□□ -2.95
TFF3Q07654 Y_RNA.75-201ENST00000362927 97 ntBASIC-3.36□□□□□ -2.95
TFF3Q07654 Y_RNA.353-201ENST00000365440 108 ntBASIC-3.36□□□□□ -2.95
TFF3Q07654 RNU6-524P-201ENST00000384270 107 ntBASIC-3.36□□□□□ -2.95
TFF3Q07654 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-3.36□□□□□ -2.95
TFF3Q07654 Y_RNA.683-201ENST00000516508 93 ntBASIC-3.36□□□□□ -2.95
TFF3Q07654 AC002044.1-201ENST00000606707 158 ntBASIC-3.36□□□□□ -2.95
TFF3Q07654 Y_RNA.46-201ENST00000362695 102 ntBASIC-3.37□□□□□ -2.95
TFF3Q07654 RNU6-266P-201ENST00000364225 107 ntBASIC-3.37□□□□□ -2.95
TFF3Q07654 Y_RNA.239-201ENST00000364444 113 ntBASIC-3.37□□□□□ -2.95
TFF3Q07654 Y_RNA.576-201ENST00000384781 102 ntBASIC-3.37□□□□□ -2.95
TFF3Q07654 MIR558-201ENST00000384920 94 ntBASIC-3.37□□□□□ -2.95
TFF3Q07654 RNU6-695P-201ENST00000391157 104 ntBASIC-3.37□□□□□ -2.95
TFF3Q07654 AF228730.4-201ENST00000421457 183 ntBASIC-3.37□□□□□ -2.95
TFF3Q07654 AC123904.2-201ENST00000548059 300 ntBASIC-3.37□□□□□ -2.95
TFF3Q07654 MIR548AM-201ENST00000584298 74 ntBASIC-3.37□□□□□ -2.95
TFF3Q07654 ELOCP4-201ENST00000420090 333 ntBASIC-3.38□□□□□ -2.95
TFF3Q07654 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-3.38□□□□□ -2.95
TFF3Q07654 Y_RNA.461-201ENST00000384263 103 ntBASIC-3.39□□□□□ -2.95
TFF3Q07654 Y_RNA.601-201ENST00000410500 113 ntBASIC-3.39□□□□□ -2.95
TFF3Q07654 RNU6-201P-201ENST00000517100 61 ntBASIC-3.39□□□□□ -2.95
TFF3Q07654 MIR3912-201ENST00000577566 105 ntBASIC-3.39□□□□□ -2.95
TFF3Q07654 AL133215.3-201ENST00000609801 448 ntBASIC-3.39□□□□□ -2.95
TFF3Q07654 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.39□□□□□ -2.95
TFF3Q07654 RNU6-179P-201ENST00000363350 107 ntBASIC-3.4□□□□□ -2.95
TFF3Q07654 RNU6-1209P-201ENST00000363655 107 ntBASIC-3.4□□□□□ -2.95
TFF3Q07654 Y_RNA.215-201ENST00000364204 112 ntBASIC-3.4□□□□□ -2.95
TFF3Q07654 MIR181A1-201ENST00000385026 110 ntBASIC-3.4□□□□□ -2.95
TFF3Q07654 AC090616.4-201ENST00000448026 115 ntBASIC-3.4□□□□□ -2.95
TFF3Q07654 MIR5708-201ENST00000579723 85 ntBASIC-3.4□□□□□ -2.95
TFF3Q07654 MIR3129-201ENST00000581095 76 ntBASIC-3.4□□□□□ -2.95
TFF3Q07654 MIR3941-201ENST00000582572 103 ntBASIC-3.4□□□□□ -2.95
TFF3Q07654 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-3.4□□□□□ -2.95
TFF3Q07654 RNU6-454P-201ENST00000364292 107 ntBASIC-3.41□□□□□ -2.96
TFF3Q07654 RNU6-767P-201ENST00000384132 107 ntBASIC-3.41□□□□□ -2.96
TFF3Q07654 RNU6-550P-201ENST00000391057 101 ntBASIC-3.41□□□□□ -2.96
TFF3Q07654 TPTE2P5-203ENST00000458118 728 ntBASIC-3.41□□□□□ -2.96
TFF3Q07654 RNU7-195P-201ENST00000458793 62 ntBASIC-3.41□□□□□ -2.96
TFF3Q07654 MIR4490-201ENST00000582647 84 ntBASIC-3.41□□□□□ -2.96
TFF3Q07654 MIR5188-201ENST00000583467 113 ntBASIC-3.41□□□□□ -2.96
TFF3Q07654 AC009248.2-201ENST00000619826 254 ntBASIC-3.41□□□□□ -2.96
TFF3Q07654 SNORD115-7-201ENST00000365306 82 ntBASIC-3.42□□□□□ -2.96
TFF3Q07654 Y_RNA.366-201ENST00000365540 102 ntBASIC-3.42□□□□□ -2.96
TFF3Q07654 RNU6-641P-201ENST00000384006 107 ntBASIC-3.42□□□□□ -2.96
TFF3Q07654 RNU6-80P-201ENST00000384195 107 ntBASIC-3.42□□□□□ -2.96
TFF3Q07654 RNU6-21P-201ENST00000384710 107 ntBASIC-3.42□□□□□ -2.96
TFF3Q07654 AC137499.1-201ENST00000427602 88 ntBASIC-3.42□□□□□ -2.96
TFF3Q07654 MTCO3P23-201ENST00000561363 289 ntBASIC-3.42□□□□□ -2.96
TFF3Q07654 MIR4748-201ENST00000578076 82 ntBASIC-3.42□□□□□ -2.96
TFF3Q07654 AL669831.3-213ENST00000636676 183 ntBASIC-3.42□□□□□ -2.96
TFF3Q07654 Y_RNA.7-201ENST00000362352 102 ntBASIC-3.43□□□□□ -2.96
TFF3Q07654 SNORD114-4-201ENST00000363962 75 ntBASIC-3.43□□□□□ -2.96
TFF3Q07654 MIR548I2-201ENST00000408348 149 ntBASIC-3.43□□□□□ -2.96
TFF3Q07654 AC108729.2-201ENST00000476543 840 ntBASIC-3.43□□□□□ -2.96
TFF3Q07654 UBE2V1P12-201ENST00000503954 474 ntBASIC-3.43□□□□□ -2.96
TFF3Q07654 UBL5P4-201ENST00000562584 236 ntBASIC-3.43□□□□□ -2.96
TFF3Q07654 AC005771.1-201ENST00000585581 349 ntBASIC-3.43□□□□□ -2.96
TFF3Q07654 AC108081.1-201ENST00000604358 221 ntBASIC-3.43□□□□□ -2.96
TFF3Q07654 RNU6-673P-201ENST00000365084 104 ntBASIC-3.44□□□□□ -2.96
TFF3Q07654 Y_RNA.465-201ENST00000384293 102 ntBASIC-3.44□□□□□ -2.96
TFF3Q07654 RNU6-434P-201ENST00000384376 107 ntBASIC-3.44□□□□□ -2.96
TFF3Q07654 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-3.44□□□□□ -2.96
TFF3Q07654 RNU2-69P-201ENST00000516061 100 ntBASIC-3.44□□□□□ -2.96
TFF3Q07654 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-3.44□□□□□ -2.96
TFF3Q07654 RNU6-1290P-201ENST00000362957 109 ntBASIC-3.45□□□□□ -2.96
TFF3Q07654 RNU7-79P-201ENST00000516082 62 ntBASIC-3.45□□□□□ -2.96
TFF3Q07654 MIR3118-1-201ENST00000581787 76 ntBASIC-3.45□□□□□ -2.96
TFF3Q07654 RNU6-85P-201ENST00000605989 107 ntBASIC-3.45□□□□□ -2.96
TFF3Q07654 MIR6841-201ENST00000637129 72 ntBASIC-3.45□□□□□ -2.96
TFF3Q07654 RNU6-961P-201ENST00000363893 105 ntBASIC-3.46□□□□□ -2.96
TFF3Q07654 AL365203.2-201ENST00000423444 196 ntBASIC-3.46□□□□□ -2.96
TFF3Q07654 DLGAP5P1-201ENST00000430307 464 ntBASIC-3.46□□□□□ -2.96
TFF3Q07654 RNU6-1012P-201ENST00000516606 109 ntBASIC-3.46□□□□□ -2.96
TFF3Q07654 RNU6-541P-201ENST00000384709 110 ntBASIC-3.47□□□□□ -2.96
TFF3Q07654 MIR216B-201ENST00000390186 82 ntBASIC-3.47□□□□□ -2.96
TFF3Q07654 RNU6-192P-201ENST00000391253 100 ntBASIC-3.47□□□□□ -2.96
TFF3Q07654 MTCYBP36-201ENST00000404146 440 ntBASIC-3.47□□□□□ -2.96
TFF3Q07654 RNU7-45P-201ENST00000459460 63 ntBASIC-3.47□□□□□ -2.96
TFF3Q07654 MTCO2P29-201ENST00000465212 189 ntBASIC-3.47□□□□□ -2.96
TFF3Q07654 AC133104.2-201ENST00000615272 193 ntBASIC-3.47□□□□□ -2.96
TFF3Q07654 RNY1P12-201ENST00000364251 105 ntBASIC-3.48□□□□□ -2.97
TFF3Q07654 Y_RNA.342-201ENST00000365352 113 ntBASIC-3.48□□□□□ -2.97
TFF3Q07654 RNU6-601P-201ENST00000384540 107 ntBASIC-3.48□□□□□ -2.97
TFF3Q07654 AC124303.1-201ENST00000605703 360 ntBASIC-3.48□□□□□ -2.97
TFF3Q07654 Y_RNA.812-201ENST00000610788 101 ntBASIC-3.48□□□□□ -2.97
TFF3Q07654 Y_RNA.784-201ENST00000613803 101 ntBASIC-3.48□□□□□ -2.97
TFF3Q07654 MIR548O2-201ENST00000616090 70 ntBASIC-3.48□□□□□ -2.97
TFF3Q07654 Y_RNA.787-201ENST00000616522 101 ntBASIC-3.48□□□□□ -2.97
TFF3Q07654 Y_RNA.780-201ENST00000617336 101 ntBASIC-3.48□□□□□ -2.97
TFF3Q07654 Y_RNA.801-201ENST00000619005 101 ntBASIC-3.48□□□□□ -2.97
TFF3Q07654 Y_RNA.91-201ENST00000363042 107 ntBASIC-3.49□□□□□ -2.97
TFF3Q07654 RNU6-522P-201ENST00000364497 107 ntBASIC-3.49□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms