Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.8□□□□□ -2.28
CKAP4Q07065 AC074198.2-201ENST00000508153 258 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 SNORA31.2-201ENST00000516019 134 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 AC015712.3-201ENST00000559380 164 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 AP000942.3-201ENST00000603702 160 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 AC243994.1-201ENST00000618627 109 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 MTND1P7-201ENST00000632801 297 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 SNORA25.7-201ENST00000364375 127 ntBASIC0.79□□□□□ -2.28
CKAP4Q07065 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
CKAP4Q07065 Y_RNA.357-201ENST00000365487 109 ntBASIC0.79□□□□□ -2.28
CKAP4Q07065 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
CKAP4Q07065 MIR1185-1-201ENST00000408598 86 ntBASIC0.79□□□□□ -2.28
CKAP4Q07065 RNU6-394P-201ENST00000410735 107 ntBASIC0.79□□□□□ -2.28
CKAP4Q07065 RNU7-73P-201ENST00000458743 63 ntBASIC0.79□□□□□ -2.28
CKAP4Q07065 RNU7-96P-201ENST00000459535 64 ntBASIC0.79□□□□□ -2.28
CKAP4Q07065 RPS29P24-201ENST00000486345 171 ntBASIC0.79□□□□□ -2.28
CKAP4Q07065 RNU6-998P-201ENST00000515894 101 ntBASIC0.79□□□□□ -2.28
CKAP4Q07065 SCARNA15-202ENST00000516881 127 ntBASIC0.79□□□□□ -2.28
CKAP4Q07065 MIR3646-201ENST00000578301 84 ntBASIC0.79□□□□□ -2.28
CKAP4Q07065 MIR3668-201ENST00000582138 75 ntBASIC0.79□□□□□ -2.28
CKAP4Q07065 Y_RNA.272-201ENST00000364696 102 ntBASIC0.78□□□□□ -2.28
CKAP4Q07065 Y_RNA.521-201ENST00000384560 114 ntBASIC0.78□□□□□ -2.28
CKAP4Q07065 Y_RNA.580-201ENST00000391004 95 ntBASIC0.78□□□□□ -2.28
CKAP4Q07065 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.78□□□□□ -2.28
CKAP4Q07065 snoU13.16-201ENST00000459350 104 ntBASIC0.78□□□□□ -2.28
CKAP4Q07065 SNORD79.1-201ENST00000516069 84 ntBASIC0.78□□□□□ -2.28
CKAP4Q07065 RNU11-2P-201ENST00000516898 142 ntBASIC0.78□□□□□ -2.28
CKAP4Q07065 MIR548AO-201ENST00000579992 96 ntBASIC0.78□□□□□ -2.28
CKAP4Q07065 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CKAP4Q07065 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.77□□□□□ -2.29
CKAP4Q07065 SNORA25.3-201ENST00000363205 127 ntBASIC0.77□□□□□ -2.29
CKAP4Q07065 Y_RNA.150-201ENST00000363562 102 ntBASIC0.77□□□□□ -2.29
CKAP4Q07065 Y_RNA.180-201ENST00000363867 113 ntBASIC0.77□□□□□ -2.29
CKAP4Q07065 RNU6-910P-201ENST00000390844 107 ntBASIC0.77□□□□□ -2.29
CKAP4Q07065 RNU6-913P-201ENST00000390913 95 ntBASIC0.77□□□□□ -2.29
CKAP4Q07065 SNORD12-201ENST00000391002 90 ntBASIC0.77□□□□□ -2.29
CKAP4Q07065 SNORA75.5-201ENST00000391291 81 ntBASIC0.77□□□□□ -2.29
CKAP4Q07065 AL035398.1-201ENST00000430869 322 ntBASIC0.77□□□□□ -2.29
CKAP4Q07065 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.77□□□□□ -2.29
CKAP4Q07065 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
CKAP4Q07065 DNAJC19P2-201ENST00000593340 302 ntBASIC0.77□□□□□ -2.29
CKAP4Q07065 MIR8055-201ENST00000610739 97 ntBASIC0.77□□□□□ -2.29
CKAP4Q07065 MIR103A2-201ENST00000362154 78 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 RNU6-1082P-201ENST00000364574 107 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 Y_RNA.270-201ENST00000364693 104 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 RNU6-1336P-201ENST00000383886 109 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 SNORA80D-201ENST00000384488 135 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 MIR100-201ENST00000385259 80 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 SNORA75.2-201ENST00000391138 150 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 SNORA75.3-201ENST00000391231 150 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 RNU7-67P-201ENST00000459003 62 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 RNU7-21P-201ENST00000459430 62 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.76□□□□□ -2.29
CKAP4Q07065 RNU7-53P-201ENST00000516705 60 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 RNU6-958P-201ENST00000516995 106 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 SNORA70.22-201ENST00000517160 124 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.76□□□□□ -2.29
CKAP4Q07065 AC211469.2-201ENST00000605461 205 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 SEPT14P17-201ENST00000617978 177 ntBASIC0.76□□□□□ -2.29
CKAP4Q07065 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.75□□□□□ -2.29
CKAP4Q07065 RNU6-53P-201ENST00000365367 106 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 Y_RNA.351-201ENST00000365436 96 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 Y_RNA.464-201ENST00000384282 110 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 MIR548I3-201ENST00000408378 149 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 MIR548I1-201ENST00000408810 149 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 RNU2-11P-201ENST00000459191 187 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 RNU7-80P-201ENST00000459562 61 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 RNA5SP236-201ENST00000516169 116 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 ACA64.5-201ENST00000516207 127 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 RNU6-1212P-201ENST00000517023 104 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 AC131055.1-201ENST00000584626 316 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 AC091932.4-201ENST00000623386 200 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 AC091895.1-201ENST00000624494 256 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 MIR3658-201ENST00000636291 56 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 MIR6844-201ENST00000637122 62 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 Z97988.1-201ENST00000637697 135 ntBASIC0.75□□□□□ -2.29
CKAP4Q07065 Y_RNA.52-201ENST00000362760 96 ntBASIC0.74□□□□□ -2.29
CKAP4Q07065 Y_RNA.251-201ENST00000364551 99 ntBASIC0.74□□□□□ -2.29
CKAP4Q07065 Y_RNA.454-201ENST00000384224 113 ntBASIC0.74□□□□□ -2.29
CKAP4Q07065 Y_RNA.497-201ENST00000384447 98 ntBASIC0.74□□□□□ -2.29
CKAP4Q07065 MIR19B1-201ENST00000384829 87 ntBASIC0.74□□□□□ -2.29
CKAP4Q07065 MT-TN-201ENST00000387400 73 ntBASIC0.74□□□□□ -2.29
CKAP4Q07065 SNORA26.6-201ENST00000391256 115 ntBASIC0.74□□□□□ -2.29
CKAP4Q07065 RNU6-613P-201ENST00000410412 108 ntBASIC0.74□□□□□ -2.29
CKAP4Q07065 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.74□□□□□ -2.29
CKAP4Q07065 RNU6-1149P-201ENST00000516810 97 ntBASIC0.74□□□□□ -2.29
CKAP4Q07065 MIR3144-201ENST00000579460 79 ntBASIC0.74□□□□□ -2.29
CKAP4Q07065 MIR6516-201ENST00000630554 81 ntBASIC0.74□□□□□ -2.29
CKAP4Q07065 MTND5P32-201ENST00000560711 1802 ntBASIC0.73□□□□□ -2.29
CKAP4Q07065 Y_RNA.140-201ENST00000363474 103 ntBASIC0.73□□□□□ -2.29
CKAP4Q07065 RNY1P11-201ENST00000363759 113 ntBASIC0.73□□□□□ -2.29
CKAP4Q07065 RNU6-818P-201ENST00000364837 108 ntBASIC0.73□□□□□ -2.29
CKAP4Q07065 RNU6-1130P-201ENST00000365434 107 ntBASIC0.73□□□□□ -2.29
CKAP4Q07065 MIR222-201ENST00000384992 110 ntBASIC0.73□□□□□ -2.29
CKAP4Q07065 RNU6-588P-201ENST00000410281 105 ntBASIC0.73□□□□□ -2.29
CKAP4Q07065 AC090844.1-201ENST00000422019 156 ntBASIC0.73□□□□□ -2.29
CKAP4Q07065 AC002429.1-201ENST00000437672 148 ntBASIC0.73□□□□□ -2.29
CKAP4Q07065 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.73□□□□□ -2.29
CKAP4Q07065 RNU7-197P-201ENST00000458836 62 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 255.4 ms