Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNY1P13-201ENST00000365030 105 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 MIR450B-201ENST00000401182 78 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 AC009961.2-201ENST00000435771 251 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 AP003181.2-201ENST00000528941 181 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 AL158209.2-201ENST00000619266 216 ntBASIC-1.14□□□□□ -2.59
PRKDCP78527 RNU6-704P-201ENST00000364162 103 ntBASIC-1.15□□□□□ -2.59
PRKDCP78527 RNU7-134P-201ENST00000458997 64 ntBASIC-1.15□□□□□ -2.59
PRKDCP78527 RNU7-167P-201ENST00000459160 62 ntBASIC-1.15□□□□□ -2.59
PRKDCP78527 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.15□□□□□ -2.59
PRKDCP78527 SNORD115-47-201ENST00000391226 86 ntBASIC-1.15□□□□□ -2.59
PRKDCP78527 MIR548O-201ENST00000408583 114 ntBASIC-1.15□□□□□ -2.59
PRKDCP78527 AC116353.3-201ENST00000511215 249 ntBASIC-1.15□□□□□ -2.59
PRKDCP78527 RNU6-436P-201ENST00000516171 114 ntBASIC-1.15□□□□□ -2.59
PRKDCP78527 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.15□□□□□ -2.59
PRKDCP78527 MIR6717-201ENST00000622747 73 ntBASIC-1.15□□□□□ -2.59
PRKDCP78527 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.15□□□□□ -2.59
PRKDCP78527 AC096949.1-201ENST00000412047 152 ntBASIC-1.15□□□□□ -2.59
PRKDCP78527 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.15□□□□□ -2.59
PRKDCP78527 U2.17-201ENST00000611454 95 ntBASIC-1.15□□□□□ -2.59
PRKDCP78527 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.16□□□□□ -2.59
PRKDCP78527 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.16□□□□□ -2.59
PRKDCP78527 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.16□□□□□ -2.59
PRKDCP78527 SNORA26.6-201ENST00000391256 115 ntBASIC-1.16□□□□□ -2.59
PRKDCP78527 RNU6-710P-201ENST00000410424 105 ntBASIC-1.16□□□□□ -2.59
PRKDCP78527 RNU6-412P-201ENST00000516434 106 ntBASIC-1.16□□□□□ -2.59
PRKDCP78527 RNU6-230P-201ENST00000362457 104 ntBASIC-1.16□□□□□ -2.59
PRKDCP78527 MIR216B-201ENST00000390186 82 ntBASIC-1.16□□□□□ -2.59
PRKDCP78527 RNU2-61P-201ENST00000411069 191 ntBASIC-1.16□□□□□ -2.59
PRKDCP78527 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.16□□□□□ -2.59
PRKDCP78527 AC245505.1-201ENST00000556398 224 ntBASIC-1.16□□□□□ -2.59
PRKDCP78527 AC124312.5-201ENST00000604451 268 ntBASIC-1.16□□□□□ -2.59
PRKDCP78527 AC104010.1-201ENST00000616889 150 ntBASIC-1.16□□□□□ -2.59
PRKDCP78527 SNORA2.1-201ENST00000363089 137 ntBASIC-1.16□□□□□ -2.6
PRKDCP78527 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.16□□□□□ -2.6
PRKDCP78527 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.16□□□□□ -2.6
PRKDCP78527 RNU6-998P-201ENST00000515894 101 ntBASIC-1.16□□□□□ -2.6
PRKDCP78527 MIR5188-201ENST00000583467 113 ntBASIC-1.16□□□□□ -2.6
PRKDCP78527 RNU4-80P-201ENST00000363200 141 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 RNU6-281P-201ENST00000384212 103 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 RNU6-809P-201ENST00000384461 107 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 MIR29B1-201ENST00000385015 81 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 MTCYBP36-201ENST00000404146 440 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 MTND2P30-201ENST00000456663 382 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 AC091179.3-201ENST00000474761 144 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 TRAJ51-201ENST00000504127 63 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.17□□□□□ -2.6
PRKDCP78527 RNU6-365P-201ENST00000517113 106 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 RNY1P16-201ENST00000363063 111 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 RNU6-790P-201ENST00000384479 105 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 SNORA49-201ENST00000386157 136 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 AC007671.2-201ENST00000637344 619 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 SNORD116-12-201ENST00000384468 92 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 MTATP6P20-201ENST00000414147 562 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.17□□□□□ -2.6
PRKDCP78527 Z84480.1-201ENST00000605131 311 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 AL080274.1-201ENST00000605565 220 ntBASIC-1.17□□□□□ -2.6
PRKDCP78527 SNORD37.1-201ENST00000390968 65 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 RNU6-337P-201ENST00000391243 106 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 MIR1278-201ENST00000408753 81 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 GPR143P-201ENST00000434155 205 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 AC108059.2-201ENST00000434626 151 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.18□□□□□ -2.6
PRKDCP78527 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 RNU6-175P-201ENST00000516896 107 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 SCOCP1-201ENST00000554676 349 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 MIR4756-201ENST00000577874 78 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 MIR8068-201ENST00000618032 68 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.18□□□□□ -2.6
PRKDCP78527 RNU6-82P-201ENST00000363970 107 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.18□□□□□ -2.6
PRKDCP78527 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 MIR548A2-201ENST00000384956 97 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.18□□□□□ -2.6
PRKDCP78527 CPDP1-201ENST00000579660 283 ntBASIC-1.18□□□□□ -2.6
PRKDCP78527 SNORA62.4-201ENST00000365504 151 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 MTCYBP8-201ENST00000422855 651 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 AC022140.2-201ENST00000623500 188 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 RNU6-831P-201ENST00000384548 107 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 MIR517A-201ENST00000385001 87 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.19□□□□□ -2.6
PRKDCP78527 AC079248.2-201ENST00000623779 326 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 RNU6-214P-201ENST00000384130 107 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 RPS3AP52-201ENST00000435639 297 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 FGF7P4-201ENST00000509595 295 ntBASIC-1.19□□□□□ -2.6
PRKDCP78527 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 RNU6-987P-201ENST00000384759 104 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 SNORA19.2-201ENST00000516013 114 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms