Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ERVFC1P60507 MIR6073-201ENST00000352083 89 ntBASIC2.38□□□□□ -2.03
ERVFC1P60507 Y_RNA.430-201ENST00000384081 110 ntBASIC2.38□□□□□ -2.03
ERVFC1P60507 SNORA70.7-201ENST00000384159 133 ntBASIC2.38□□□□□ -2.03
ERVFC1P60507 MIR605-201ENST00000385078 83 ntBASIC2.38□□□□□ -2.03
ERVFC1P60507 RNU6-679P-201ENST00000391003 106 ntBASIC2.38□□□□□ -2.03
ERVFC1P60507 RNU6-644P-201ENST00000391155 98 ntBASIC2.38□□□□□ -2.03
ERVFC1P60507 RNA5SP261-201ENST00000410536 106 ntBASIC2.38□□□□□ -2.03
ERVFC1P60507 HSPE1P9-201ENST00000440046 311 ntBASIC2.38□□□□□ -2.03
ERVFC1P60507 AC109327.2-201ENST00000448339 378 ntBASIC2.38□□□□□ -2.03
ERVFC1P60507 RNA5SP168-201ENST00000516642 112 ntBASIC2.38□□□□□ -2.03
ERVFC1P60507 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.38□□□□□ -2.03
ERVFC1P60507 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.38□□□□□ -2.03
ERVFC1P60507 AC245060.5-201ENST00000610778 3293 ntBASIC2.37□□□□□ -2.03
ERVFC1P60507 Y_RNA.171-201ENST00000363760 102 ntBASIC2.37□□□□□ -2.03
ERVFC1P60507 SNORD45B-201ENST00000364617 72 ntBASIC2.37□□□□□ -2.03
ERVFC1P60507 MIR452-201ENST00000385020 85 ntBASIC2.37□□□□□ -2.03
ERVFC1P60507 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
ERVFC1P60507 SNORA26.6-201ENST00000391256 115 ntBASIC2.37□□□□□ -2.03
ERVFC1P60507 RNU7-53P-201ENST00000516705 60 ntBASIC2.37□□□□□ -2.03
ERVFC1P60507 RNA5SP82-201ENST00000516707 92 ntBASIC2.37□□□□□ -2.03
ERVFC1P60507 U7.3-201ENST00000616123 62 ntBASIC2.37□□□□□ -2.03
ERVFC1P60507 AC025521.1-201ENST00000621624 286 ntBASIC2.37□□□□□ -2.03
ERVFC1P60507 MIR6766-201ENST00000622641 72 ntBASIC2.37□□□□□ -2.03
ERVFC1P60507 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.36□□□□□ -2.03
ERVFC1P60507 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
ERVFC1P60507 SNORA22.1-201ENST00000362701 134 ntBASIC2.36□□□□□ -2.03
ERVFC1P60507 SNORA3A-201ENST00000364113 130 ntBASIC2.36□□□□□ -2.03
ERVFC1P60507 RNU6-60P-201ENST00000364792 103 ntBASIC2.36□□□□□ -2.03
ERVFC1P60507 Y_RNA.370-201ENST00000365589 108 ntBASIC2.36□□□□□ -2.03
ERVFC1P60507 RNU6-675P-201ENST00000384236 104 ntBASIC2.36□□□□□ -2.03
ERVFC1P60507 SNORA18-201ENST00000384416 132 ntBASIC2.36□□□□□ -2.03
ERVFC1P60507 MRPL35P3-201ENST00000421557 364 ntBASIC2.36□□□□□ -2.03
ERVFC1P60507 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ERVFC1P60507 RNU6-795P-201ENST00000516323 103 ntBASIC2.36□□□□□ -2.03
ERVFC1P60507 RNA5SP395-201ENST00000516567 118 ntBASIC2.36□□□□□ -2.03
ERVFC1P60507 DNAJC19P9-201ENST00000555084 351 ntBASIC2.36□□□□□ -2.03
ERVFC1P60507 MIR4777-201ENST00000583710 86 ntBASIC2.36□□□□□ -2.03
ERVFC1P60507 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
ERVFC1P60507 ICE2P2-201ENST00000483823 2787 ntBASIC2.36□□□□□ -2.03
ERVFC1P60507 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ERVFC1P60507 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
ERVFC1P60507 RNU6-1201P-201ENST00000384227 107 ntBASIC2.35□□□□□ -2.03
ERVFC1P60507 RNU6-1031P-201ENST00000384773 107 ntBASIC2.35□□□□□ -2.03
ERVFC1P60507 SNORD77B-201ENST00000391112 67 ntBASIC2.35□□□□□ -2.03
ERVFC1P60507 BX510359.4-201ENST00000423750 193 ntBASIC2.35□□□□□ -2.03
ERVFC1P60507 RPS29P29-201ENST00000456396 171 ntBASIC2.35□□□□□ -2.03
ERVFC1P60507 RNU7-73P-201ENST00000458743 63 ntBASIC2.35□□□□□ -2.03
ERVFC1P60507 RNU7-45P-201ENST00000459460 63 ntBASIC2.35□□□□□ -2.03
ERVFC1P60507 RPL23AP42-201ENST00000471152 471 ntBASIC2.35□□□□□ -2.03
ERVFC1P60507 RPL23AP63-201ENST00000498752 471 ntBASIC2.35□□□□□ -2.03
ERVFC1P60507 RNU7-12P-201ENST00000516030 62 ntBASIC2.35□□□□□ -2.03
ERVFC1P60507 RNA5SP137-201ENST00000516833 135 ntBASIC2.35□□□□□ -2.03
ERVFC1P60507 MIR5094-201ENST00000578766 85 ntBASIC2.35□□□□□ -2.03
ERVFC1P60507 AL513534.2-201ENST00000603836 250 ntBASIC2.35□□□□□ -2.03
ERVFC1P60507 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ERVFC1P60507 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ERVFC1P60507 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
ERVFC1P60507 Y_RNA.95-201ENST00000363079 95 ntBASIC2.34□□□□□ -2.03
ERVFC1P60507 Y_RNA.470-201ENST00000384307 117 ntBASIC2.34□□□□□ -2.03
ERVFC1P60507 MIR136-201ENST00000385207 82 ntBASIC2.34□□□□□ -2.03
ERVFC1P60507 MIR1270-201ENST00000459320 83 ntBASIC2.34□□□□□ -2.03
ERVFC1P60507 AC022254.1-201ENST00000567857 235 ntBASIC2.34□□□□□ -2.03
ERVFC1P60507 MIR548AE2-201ENST00000583456 67 ntBASIC2.34□□□□□ -2.03
ERVFC1P60507 MIR4439-201ENST00000583746 80 ntBASIC2.34□□□□□ -2.03
ERVFC1P60507 AL137847.3-201ENST00000611521 109 ntBASIC2.34□□□□□ -2.03
ERVFC1P60507 MIR3202-2-201ENST00000635980 79 ntBASIC2.34□□□□□ -2.03
ERVFC1P60507 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
ERVFC1P60507 RNU6-1313P-201ENST00000362622 102 ntBASIC2.33□□□□□ -2.04
ERVFC1P60507 SNORD115-3-201ENST00000363100 82 ntBASIC2.33□□□□□ -2.04
ERVFC1P60507 RNU6-616P-201ENST00000384353 107 ntBASIC2.33□□□□□ -2.04
ERVFC1P60507 RNU1-148P-201ENST00000384472 162 ntBASIC2.33□□□□□ -2.04
ERVFC1P60507 MIR144-201ENST00000384886 86 ntBASIC2.33□□□□□ -2.04
ERVFC1P60507 U8.13-201ENST00000390842 128 ntBASIC2.33□□□□□ -2.04
ERVFC1P60507 SNORA7.5-201ENST00000410672 110 ntBASIC2.33□□□□□ -2.04
ERVFC1P60507 SCARNA16.3-201ENST00000516595 184 ntBASIC2.33□□□□□ -2.04
ERVFC1P60507 RNA5SP33-201ENST00000516687 98 ntBASIC2.33□□□□□ -2.04
ERVFC1P60507 AC022202.1-201ENST00000613515 211 ntBASIC2.33□□□□□ -2.04
ERVFC1P60507 MIR6717-201ENST00000622747 73 ntBASIC2.33□□□□□ -2.04
ERVFC1P60507 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.32□□□□□ -2.04
ERVFC1P60507 AC131280.1-202ENST00000624067 4211 ntBASIC2.32□□□□□ -2.04
ERVFC1P60507 RNY1P1-201ENST00000364372 112 ntBASIC2.32□□□□□ -2.04
ERVFC1P60507 MIR1283-2-201ENST00000408621 87 ntBASIC2.32□□□□□ -2.04
ERVFC1P60507 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.32□□□□□ -2.04
ERVFC1P60507 AC022137.1-201ENST00000483735 151 ntBASIC2.32□□□□□ -2.04
ERVFC1P60507 RNA5SP458-201ENST00000516188 119 ntBASIC2.32□□□□□ -2.04
ERVFC1P60507 Y_RNA.705-201ENST00000516862 110 ntBASIC2.32□□□□□ -2.04
ERVFC1P60507 RNU6-958P-201ENST00000516995 106 ntBASIC2.32□□□□□ -2.04
ERVFC1P60507 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.32□□□□□ -2.04
ERVFC1P60507 MIR548Z-201ENST00000584743 97 ntBASIC2.32□□□□□ -2.04
ERVFC1P60507 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
ERVFC1P60507 IGLL4P-201ENST00000614590 133 ntBASIC2.32□□□□□ -2.04
ERVFC1P60507 AC091304.10-201ENST00000641554 121 ntBASIC2.32□□□□□ -2.04
ERVFC1P60507 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ERVFC1P60507 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
ERVFC1P60507 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ERVFC1P60507 RNU6-228P-201ENST00000362700 106 ntBASIC2.31□□□□□ -2.04
ERVFC1P60507 RNU1-51P-201ENST00000365345 176 ntBASIC2.31□□□□□ -2.04
ERVFC1P60507 MIR516B2-201ENST00000385190 85 ntBASIC2.31□□□□□ -2.04
ERVFC1P60507 RNU6-972P-201ENST00000391208 107 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms