Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MIR942-201ENST00000401111 86 ntBASIC0.76□□□□□ -2.29
PEX3P56589 Y_RNA.626-201ENST00000411288 95 ntBASIC0.76□□□□□ -2.29
PEX3P56589 RNU6-998P-201ENST00000515894 101 ntBASIC0.76□□□□□ -2.29
PEX3P56589 RNU6-1023P-201ENST00000516137 106 ntBASIC0.76□□□□□ -2.29
PEX3P56589 ACA64.5-201ENST00000516207 127 ntBASIC0.76□□□□□ -2.29
PEX3P56589 Y_RNA.673-201ENST00000516306 88 ntBASIC0.76□□□□□ -2.29
PEX3P56589 RNY3P16-201ENST00000516338 101 ntBASIC0.76□□□□□ -2.29
PEX3P56589 AC133485.1-201ENST00000567176 124 ntBASIC0.76□□□□□ -2.29
PEX3P56589 AC138907.6-201ENST00000568401 126 ntBASIC0.76□□□□□ -2.29
PEX3P56589 MIR4308-201ENST00000580634 81 ntBASIC0.76□□□□□ -2.29
PEX3P56589 MIR3128-201ENST00000581957 66 ntBASIC0.76□□□□□ -2.29
PEX3P56589 AL365205.2-201ENST00000594586 68 ntBASIC0.76□□□□□ -2.29
PEX3P56589 AL078603.1-201ENST00000603824 313 ntBASIC0.76□□□□□ -2.29
PEX3P56589 Z97988.1-201ENST00000637697 135 ntBASIC0.76□□□□□ -2.29
PEX3P56589 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
PEX3P56589 Y_RNA.116-201ENST00000363292 103 ntBASIC0.75□□□□□ -2.29
PEX3P56589 SNORD27-201ENST00000363981 72 ntBASIC0.75□□□□□ -2.29
PEX3P56589 RNU6-978P-201ENST00000364371 103 ntBASIC0.75□□□□□ -2.29
PEX3P56589 RNU6-1335P-201ENST00000365426 107 ntBASIC0.75□□□□□ -2.29
PEX3P56589 Y_RNA.477-201ENST00000384352 108 ntBASIC0.75□□□□□ -2.29
PEX3P56589 AC244023.1-201ENST00000426884 112 ntBASIC0.75□□□□□ -2.29
PEX3P56589 AL035398.1-201ENST00000430869 322 ntBASIC0.75□□□□□ -2.29
PEX3P56589 FABP5P4-201ENST00000437203 171 ntBASIC0.75□□□□□ -2.29
PEX3P56589 AC107297.1-201ENST00000459991 176 ntBASIC0.75□□□□□ -2.29
PEX3P56589 MIR4714-201ENST00000580728 77 ntBASIC0.75□□□□□ -2.29
PEX3P56589 MIR4744-201ENST00000581563 82 ntBASIC0.75□□□□□ -2.29
PEX3P56589 AC242498.1-201ENST00000604134 111 ntBASIC0.75□□□□□ -2.29
PEX3P56589 Y_RNA.121-201ENST00000363309 113 ntBASIC0.74□□□□□ -2.29
PEX3P56589 Y_RNA.307-201ENST00000365022 117 ntBASIC0.74□□□□□ -2.29
PEX3P56589 RNU6-728P-201ENST00000365375 104 ntBASIC0.74□□□□□ -2.29
PEX3P56589 Y_RNA.542-201ENST00000384641 111 ntBASIC0.74□□□□□ -2.29
PEX3P56589 RNU7-96P-201ENST00000459535 64 ntBASIC0.74□□□□□ -2.29
PEX3P56589 AC004812.1-201ENST00000540773 146 ntBASIC0.74□□□□□ -2.29
PEX3P56589 MIR4264-201ENST00000583520 66 ntBASIC0.74□□□□□ -2.29
PEX3P56589 MIR5197-201ENST00000583721 112 ntBASIC0.74□□□□□ -2.29
PEX3P56589 SNORA4-201ENST00000584302 138 ntBASIC0.74□□□□□ -2.29
PEX3P56589 Y_RNA.199-201ENST00000364014 102 ntBASIC0.73□□□□□ -2.29
PEX3P56589 RNU6-702P-201ENST00000364982 107 ntBASIC0.73□□□□□ -2.29
PEX3P56589 Y_RNA.308-201ENST00000365043 101 ntBASIC0.73□□□□□ -2.29
PEX3P56589 RNU6-1189P-201ENST00000383958 107 ntBASIC0.73□□□□□ -2.29
PEX3P56589 Y_RNA.447-201ENST00000384184 113 ntBASIC0.73□□□□□ -2.29
PEX3P56589 RNU6-574P-201ENST00000384265 107 ntBASIC0.73□□□□□ -2.29
PEX3P56589 RNU6-196P-201ENST00000384315 107 ntBASIC0.73□□□□□ -2.29
PEX3P56589 SNORA2B-201ENST00000384583 137 ntBASIC0.73□□□□□ -2.29
PEX3P56589 RNU6-578P-201ENST00000390980 103 ntBASIC0.73□□□□□ -2.29
PEX3P56589 MIR1827-201ENST00000408549 66 ntBASIC0.73□□□□□ -2.29
PEX3P56589 RNU2-64P-201ENST00000411315 191 ntBASIC0.73□□□□□ -2.29
PEX3P56589 RPS3AP1-201ENST00000413190 320 ntBASIC0.73□□□□□ -2.29
PEX3P56589 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.73□□□□□ -2.29
PEX3P56589 MTND5P15-201ENST00000434246 349 ntBASIC0.73□□□□□ -2.29
PEX3P56589 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.73□□□□□ -2.29
PEX3P56589 U7.7-201ENST00000459276 60 ntBASIC0.73□□□□□ -2.29
PEX3P56589 RNU4-71P-201ENST00000516258 113 ntBASIC0.73□□□□□ -2.29
PEX3P56589 RNU6-1110P-201ENST00000516462 101 ntBASIC0.73□□□□□ -2.29
PEX3P56589 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.73□□□□□ -2.29
PEX3P56589 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
PEX3P56589 7SK.10-201ENST00000621414 298 ntBASIC0.73□□□□□ -2.29
PEX3P56589 Y_RNA.7-201ENST00000362352 102 ntBASIC0.72□□□□□ -2.29
PEX3P56589 RNU6-1292P-201ENST00000383856 107 ntBASIC0.72□□□□□ -2.29
PEX3P56589 RNU6-463P-201ENST00000384340 107 ntBASIC0.72□□□□□ -2.29
PEX3P56589 SNORA26.6-201ENST00000391256 115 ntBASIC0.72□□□□□ -2.29
PEX3P56589 RNU6-493P-201ENST00000391321 108 ntBASIC0.72□□□□□ -2.29
PEX3P56589 RNU6-1190P-201ENST00000410811 104 ntBASIC0.72□□□□□ -2.29
PEX3P56589 RNU7-67P-201ENST00000459003 62 ntBASIC0.72□□□□□ -2.29
PEX3P56589 snoU13.21-201ENST00000459368 105 ntBASIC0.72□□□□□ -2.29
PEX3P56589 RNA5SP220-201ENST00000516298 104 ntBASIC0.72□□□□□ -2.29
PEX3P56589 RNU7-53P-201ENST00000516705 60 ntBASIC0.72□□□□□ -2.29
PEX3P56589 RNU6-958P-201ENST00000516995 106 ntBASIC0.72□□□□□ -2.29
PEX3P56589 RNU6-1223P-201ENST00000517124 104 ntBASIC0.72□□□□□ -2.29
PEX3P56589 RNU6-111P-201ENST00000517179 105 ntBASIC0.72□□□□□ -2.29
PEX3P56589 MIR3149-201ENST00000584629 83 ntBASIC0.72□□□□□ -2.29
PEX3P56589 AL162730.1-201ENST00000605734 292 ntBASIC0.72□□□□□ -2.29
PEX3P56589 uc_338.6-201ENST00000613544 171 ntBASIC0.72□□□□□ -2.29
PEX3P56589 Y_RNA.65-201ENST00000362846 100 ntBASIC0.71□□□□□ -2.3
PEX3P56589 Y_RNA.144-201ENST00000363521 113 ntBASIC0.71□□□□□ -2.3
PEX3P56589 Y_RNA.435-201ENST00000384095 112 ntBASIC0.71□□□□□ -2.3
PEX3P56589 Y_RNA.571-201ENST00000384753 98 ntBASIC0.71□□□□□ -2.3
PEX3P56589 MIR608-201ENST00000384820 100 ntBASIC0.71□□□□□ -2.3
PEX3P56589 MIR605-201ENST00000385078 83 ntBASIC0.71□□□□□ -2.3
PEX3P56589 RNU6-205P-201ENST00000390858 107 ntBASIC0.71□□□□□ -2.3
PEX3P56589 MIR548I3-201ENST00000408378 149 ntBASIC0.71□□□□□ -2.3
PEX3P56589 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.71□□□□□ -2.3
PEX3P56589 RNU6-602P-201ENST00000411155 105 ntBASIC0.71□□□□□ -2.3
PEX3P56589 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
PEX3P56589 HMGN1P33-201ENST00000432945 451 ntBASIC0.71□□□□□ -2.3
PEX3P56589 MIR5000-201ENST00000577717 103 ntBASIC0.71□□□□□ -2.3
PEX3P56589 AL353765.1-201ENST00000605514 183 ntBASIC0.71□□□□□ -2.3
PEX3P56589 RNU2-4P-201ENST00000606190 192 ntBASIC0.71□□□□□ -2.3
PEX3P56589 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
PEX3P56589 MIR518E-201ENST00000385252 88 ntBASIC0.7□□□□□ -2.3
PEX3P56589 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
PEX3P56589 RNU6-918P-201ENST00000391219 106 ntBASIC0.7□□□□□ -2.3
PEX3P56589 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
PEX3P56589 RNU2-11P-201ENST00000459191 187 ntBASIC0.7□□□□□ -2.3
PEX3P56589 AC113410.1-201ENST00000505029 247 ntBASIC0.7□□□□□ -2.3
PEX3P56589 MIR3129-201ENST00000581095 76 ntBASIC0.7□□□□□ -2.3
PEX3P56589 RMST_2.1-201ENST00000617263 136 ntBASIC0.7□□□□□ -2.3
PEX3P56589 MIR6740-201ENST00000618268 113 ntBASIC0.7□□□□□ -2.3
PEX3P56589 MIR6734-201ENST00000621166 68 ntBASIC0.7□□□□□ -2.3
PEX3P56589 RNU6-923P-201ENST00000364753 107 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms