Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SNORA1-201ENST00000384107 130 ntBASIC0.78□□□□□ -2.28
CDH13P55290 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.78□□□□□ -2.28
CDH13P55290 AL118496.2-201ENST00000448300 230 ntBASIC0.78□□□□□ -2.28
CDH13P55290 MIR6504-201ENST00000613520 61 ntBASIC0.78□□□□□ -2.28
CDH13P55290 7SK.10-201ENST00000621414 298 ntBASIC0.78□□□□□ -2.28
CDH13P55290 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CDH13P55290 MIR96-201ENST00000362288 78 ntBASIC0.77□□□□□ -2.29
CDH13P55290 Y_RNA.193-201ENST00000363979 102 ntBASIC0.77□□□□□ -2.29
CDH13P55290 SNORA1.1-201ENST00000364671 133 ntBASIC0.77□□□□□ -2.29
CDH13P55290 Y_RNA.539-201ENST00000384635 107 ntBASIC0.77□□□□□ -2.29
CDH13P55290 RNU6-205P-201ENST00000390858 107 ntBASIC0.77□□□□□ -2.29
CDH13P55290 RNU6-578P-201ENST00000390980 103 ntBASIC0.77□□□□□ -2.29
CDH13P55290 MIR548I3-201ENST00000408378 149 ntBASIC0.77□□□□□ -2.29
CDH13P55290 Y_RNA.618-201ENST00000410949 107 ntBASIC0.77□□□□□ -2.29
CDH13P55290 RNU2-11P-201ENST00000459191 187 ntBASIC0.77□□□□□ -2.29
CDH13P55290 PSMC1P5-201ENST00000512850 177 ntBASIC0.77□□□□□ -2.29
CDH13P55290 RNU4-71P-201ENST00000516258 113 ntBASIC0.77□□□□□ -2.29
CDH13P55290 MIR5197-201ENST00000583721 112 ntBASIC0.77□□□□□ -2.29
CDH13P55290 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.76□□□□□ -2.29
CDH13P55290 Y_RNA.269-201ENST00000364685 89 ntBASIC0.76□□□□□ -2.29
CDH13P55290 RNU1-93P-201ENST00000364704 169 ntBASIC0.76□□□□□ -2.29
CDH13P55290 Y_RNA.308-201ENST00000365043 101 ntBASIC0.76□□□□□ -2.29
CDH13P55290 RNU6-1335P-201ENST00000365426 107 ntBASIC0.76□□□□□ -2.29
CDH13P55290 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CDH13P55290 RNU6-110P-201ENST00000384508 104 ntBASIC0.76□□□□□ -2.29
CDH13P55290 RNA5SP261-201ENST00000410536 106 ntBASIC0.76□□□□□ -2.29
CDH13P55290 AL121914.1-201ENST00000450188 156 ntBASIC0.76□□□□□ -2.29
CDH13P55290 RNU7-80P-201ENST00000459562 61 ntBASIC0.76□□□□□ -2.29
CDH13P55290 AC108706.1-201ENST00000611053 297 ntBASIC0.76□□□□□ -2.29
CDH13P55290 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CDH13P55290 MIR373-201ENST00000362273 69 ntBASIC0.75□□□□□ -2.29
CDH13P55290 Y_RNA.65-201ENST00000362846 100 ntBASIC0.75□□□□□ -2.29
CDH13P55290 Y_RNA.238-201ENST00000364441 102 ntBASIC0.75□□□□□ -2.29
CDH13P55290 RNU6-702P-201ENST00000364982 107 ntBASIC0.75□□□□□ -2.29
CDH13P55290 RNU6-934P-201ENST00000365154 107 ntBASIC0.75□□□□□ -2.29
CDH13P55290 Y_RNA.454-201ENST00000384224 113 ntBASIC0.75□□□□□ -2.29
CDH13P55290 MIR499A-201ENST00000384903 122 ntBASIC0.75□□□□□ -2.29
CDH13P55290 SNORD105-201ENST00000386910 85 ntBASIC0.75□□□□□ -2.29
CDH13P55290 Y_RNA.626-201ENST00000411288 95 ntBASIC0.75□□□□□ -2.29
CDH13P55290 AC006461.1-201ENST00000412637 326 ntBASIC0.75□□□□□ -2.29
CDH13P55290 RPS26P5-201ENST00000418544 335 ntBASIC0.75□□□□□ -2.29
CDH13P55290 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.75□□□□□ -2.29
CDH13P55290 RNU7-62P-201ENST00000458856 62 ntBASIC0.75□□□□□ -2.29
CDH13P55290 RNU6-1023P-201ENST00000516137 106 ntBASIC0.75□□□□□ -2.29
CDH13P55290 Y_RNA.673-201ENST00000516306 88 ntBASIC0.75□□□□□ -2.29
CDH13P55290 SNORD116-25-201ENST00000516517 92 ntBASIC0.75□□□□□ -2.29
CDH13P55290 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CDH13P55290 MIR3129-201ENST00000581095 76 ntBASIC0.75□□□□□ -2.29
CDH13P55290 AC104465.1-201ENST00000611365 139 ntBASIC0.75□□□□□ -2.29
CDH13P55290 MIR6767-201ENST00000637302 66 ntBASIC0.75□□□□□ -2.29
CDH13P55290 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
CDH13P55290 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CDH13P55290 MIR302B-201ENST00000362188 73 ntBASIC0.74□□□□□ -2.29
CDH13P55290 RNU6-369P-201ENST00000362515 102 ntBASIC0.74□□□□□ -2.29
CDH13P55290 Y_RNA.191-201ENST00000363972 113 ntBASIC0.74□□□□□ -2.29
CDH13P55290 RNY1-201ENST00000364228 113 ntBASIC0.74□□□□□ -2.29
CDH13P55290 Y_RNA.351-201ENST00000365436 96 ntBASIC0.74□□□□□ -2.29
CDH13P55290 Y_RNA.452-201ENST00000384202 108 ntBASIC0.74□□□□□ -2.29
CDH13P55290 RNU6-196P-201ENST00000384315 107 ntBASIC0.74□□□□□ -2.29
CDH13P55290 MIR100-201ENST00000385259 80 ntBASIC0.74□□□□□ -2.29
CDH13P55290 SNORD99-201ENST00000408612 74 ntBASIC0.74□□□□□ -2.29
CDH13P55290 RNU6-602P-201ENST00000411155 105 ntBASIC0.74□□□□□ -2.29
CDH13P55290 MIR18B-201ENST00000454574 71 ntBASIC0.74□□□□□ -2.29
CDH13P55290 Y_RNA.797-201ENST00000515977 94 ntBASIC0.74□□□□□ -2.29
CDH13P55290 RNY3P16-201ENST00000516338 101 ntBASIC0.74□□□□□ -2.29
CDH13P55290 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.74□□□□□ -2.29
CDH13P55290 MIR378D2-201ENST00000580636 98 ntBASIC0.74□□□□□ -2.29
CDH13P55290 MIR3128-201ENST00000581957 66 ntBASIC0.74□□□□□ -2.29
CDH13P55290 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CDH13P55290 SNORD114-22-201ENST00000365423 72 ntBASIC0.73□□□□□ -2.29
CDH13P55290 Y_RNA.354-201ENST00000365448 111 ntBASIC0.73□□□□□ -2.29
CDH13P55290 Y_RNA.477-201ENST00000384352 108 ntBASIC0.73□□□□□ -2.29
CDH13P55290 Y_RNA.571-201ENST00000384753 98 ntBASIC0.73□□□□□ -2.29
CDH13P55290 MIR605-201ENST00000385078 83 ntBASIC0.73□□□□□ -2.29
CDH13P55290 RNU6-493P-201ENST00000391321 108 ntBASIC0.73□□□□□ -2.29
CDH13P55290 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.73□□□□□ -2.29
CDH13P55290 HMGN1P33-201ENST00000432945 451 ntBASIC0.73□□□□□ -2.29
CDH13P55290 AL138752.1-201ENST00000452964 351 ntBASIC0.73□□□□□ -2.29
CDH13P55290 snoU13.2-201ENST00000459201 104 ntBASIC0.73□□□□□ -2.29
CDH13P55290 MIR4503-201ENST00000582187 83 ntBASIC0.73□□□□□ -2.29
CDH13P55290 RNU2-4P-201ENST00000606190 192 ntBASIC0.73□□□□□ -2.29
CDH13P55290 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
CDH13P55290 AC099654.10-201ENST00000640395 161 ntBASIC0.73□□□□□ -2.29
CDH13P55290 RNU6-978P-201ENST00000364371 103 ntBASIC0.72□□□□□ -2.29
CDH13P55290 MIR4452-201ENST00000583004 71 ntBASIC0.72□□□□□ -2.29
CDH13P55290 MIR376A2-201ENST00000636782 80 ntBASIC0.72□□□□□ -2.29
CDH13P55290 SNORA20.1-201ENST00000364790 130 ntBASIC0.71□□□□□ -2.3
CDH13P55290 Y_RNA.447-201ENST00000384184 113 ntBASIC0.71□□□□□ -2.3
CDH13P55290 RNU4-70P-201ENST00000384579 139 ntBASIC0.71□□□□□ -2.3
CDH13P55290 SNORA26.6-201ENST00000391256 115 ntBASIC0.71□□□□□ -2.3
CDH13P55290 snoU13.21-201ENST00000459368 105 ntBASIC0.71□□□□□ -2.3
CDH13P55290 MIR4308-201ENST00000580634 81 ntBASIC0.71□□□□□ -2.3
CDH13P55290 MIR6740-201ENST00000618268 113 ntBASIC0.71□□□□□ -2.3
CDH13P55290 MIR6717-201ENST00000622747 73 ntBASIC0.71□□□□□ -2.3
CDH13P55290 RNU6-923P-201ENST00000364753 107 ntBASIC0.7□□□□□ -2.3
CDH13P55290 RNU6-275P-201ENST00000364910 107 ntBASIC0.7□□□□□ -2.3
CDH13P55290 RNU6-643P-201ENST00000384018 107 ntBASIC0.7□□□□□ -2.3
CDH13P55290 Y_RNA.430-201ENST00000384081 110 ntBASIC0.7□□□□□ -2.3
CDH13P55290 Y_RNA.435-201ENST00000384095 112 ntBASIC0.7□□□□□ -2.3
CDH13P55290 MIR520E-201ENST00000384867 87 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms