Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 snoU13.19-201ENST00000459148 104 ntBASIC0.64□□□□□ -2.31
VCPP55072 SNORA18.4-201ENST00000516440 124 ntBASIC0.64□□□□□ -2.31
VCPP55072 RNU6-504P-201ENST00000516568 104 ntBASIC0.64□□□□□ -2.31
VCPP55072 RNU6-958P-201ENST00000516995 106 ntBASIC0.64□□□□□ -2.31
VCPP55072 AP003484.1-201ENST00000530974 250 ntBASIC0.64□□□□□ -2.31
VCPP55072 MIR4636-201ENST00000582271 80 ntBASIC0.64□□□□□ -2.31
VCPP55072 AC006504.6-201ENST00000590142 199 ntBASIC0.64□□□□□ -2.31
VCPP55072 AP000942.4-201ENST00000604811 241 ntBASIC0.64□□□□□ -2.31
VCPP55072 AC134878.1-201ENST00000619901 243 ntBASIC0.64□□□□□ -2.31
VCPP55072 MIR8062-201ENST00000621515 85 ntBASIC0.64□□□□□ -2.31
VCPP55072 MIR1-1-201ENST00000362147 71 ntBASIC0.63□□□□□ -2.31
VCPP55072 Y_RNA.82-201ENST00000363000 102 ntBASIC0.63□□□□□ -2.31
VCPP55072 RNU6-888P-201ENST00000363010 101 ntBASIC0.63□□□□□ -2.31
VCPP55072 Y_RNA.92-201ENST00000363043 102 ntBASIC0.63□□□□□ -2.31
VCPP55072 SNORD45.3-201ENST00000363836 72 ntBASIC0.63□□□□□ -2.31
VCPP55072 Y_RNA.235-201ENST00000364412 102 ntBASIC0.63□□□□□ -2.31
VCPP55072 Y_RNA.306-201ENST00000365015 102 ntBASIC0.63□□□□□ -2.31
VCPP55072 Y_RNA.312-201ENST00000365089 102 ntBASIC0.63□□□□□ -2.31
VCPP55072 Y_RNA.322-201ENST00000365151 102 ntBASIC0.63□□□□□ -2.31
VCPP55072 Y_RNA.326-201ENST00000365176 113 ntBASIC0.63□□□□□ -2.31
VCPP55072 RNU6-1160P-201ENST00000384546 104 ntBASIC0.63□□□□□ -2.31
VCPP55072 RNA5SP63-201ENST00000391225 112 ntBASIC0.63□□□□□ -2.31
VCPP55072 MIR1302-6-201ENST00000408466 90 ntBASIC0.63□□□□□ -2.31
VCPP55072 RNU2-55P-201ENST00000411146 174 ntBASIC0.63□□□□□ -2.31
VCPP55072 AC090844.1-201ENST00000422019 156 ntBASIC0.63□□□□□ -2.31
VCPP55072 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.63□□□□□ -2.31
VCPP55072 Y_RNA.650-201ENST00000459002 102 ntBASIC0.63□□□□□ -2.31
VCPP55072 RNU6-1299P-201ENST00000516316 100 ntBASIC0.63□□□□□ -2.31
VCPP55072 Y_RNA.777-201ENST00000516982 102 ntBASIC0.63□□□□□ -2.31
VCPP55072 RNU6-1270P-201ENST00000517128 108 ntBASIC0.63□□□□□ -2.31
VCPP55072 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
VCPP55072 MIR4514-201ENST00000581410 57 ntBASIC0.63□□□□□ -2.31
VCPP55072 Y_RNA.771-201ENST00000598668 102 ntBASIC0.63□□□□□ -2.31
VCPP55072 Y_RNA.789-201ENST00000622480 102 ntBASIC0.63□□□□□ -2.31
VCPP55072 U6.104-201ENST00000637979 90 ntBASIC0.63□□□□□ -2.31
VCPP55072 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
VCPP55072 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.62□□□□□ -2.31
VCPP55072 RNY3P5-201ENST00000384127 102 ntBASIC0.62□□□□□ -2.31
VCPP55072 SNORA27-201ENST00000384323 126 ntBASIC0.62□□□□□ -2.31
VCPP55072 MT-TW-201ENST00000387382 68 ntBASIC0.62□□□□□ -2.31
VCPP55072 RNU6-205P-201ENST00000390858 107 ntBASIC0.62□□□□□ -2.31
VCPP55072 SNORA26-201ENST00000391286 122 ntBASIC0.62□□□□□ -2.31
VCPP55072 Y_RNA.590-201ENST00000410140 107 ntBASIC0.62□□□□□ -2.31
VCPP55072 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
VCPP55072 SNORD36C-201ENST00000516733 66 ntBASIC0.62□□□□□ -2.31
VCPP55072 MIR4264-201ENST00000583520 66 ntBASIC0.62□□□□□ -2.31
VCPP55072 Y_RNA.66-201ENST00000362862 102 ntBASIC0.61□□□□□ -2.31
VCPP55072 Y_RNA.634-201ENST00000364811 113 ntBASIC0.61□□□□□ -2.31
VCPP55072 RNU6-484P-201ENST00000384016 107 ntBASIC0.61□□□□□ -2.31
VCPP55072 Y_RNA.461-201ENST00000384263 103 ntBASIC0.61□□□□□ -2.31
VCPP55072 Y_RNA.483-201ENST00000384380 101 ntBASIC0.61□□□□□ -2.31
VCPP55072 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
VCPP55072 MT-TT-201ENST00000387460 66 ntBASIC0.61□□□□□ -2.31
VCPP55072 SNRPGP8-201ENST00000454064 226 ntBASIC0.61□□□□□ -2.31
VCPP55072 RNU7-73P-201ENST00000458743 63 ntBASIC0.61□□□□□ -2.31
VCPP55072 Y_RNA.679-201ENST00000516416 91 ntBASIC0.61□□□□□ -2.31
VCPP55072 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
VCPP55072 MIR6759-201ENST00000638110 65 ntBASIC0.61□□□□□ -2.31
VCPP55072 Y_RNA.91-201ENST00000363042 107 ntBASIC0.6□□□□□ -2.31
VCPP55072 snoU2_19.4-201ENST00000364329 80 ntBASIC0.6□□□□□ -2.31
VCPP55072 Y_RNA.432-201ENST00000384087 111 ntBASIC0.6□□□□□ -2.31
VCPP55072 Y_RNA.574-201ENST00000384766 95 ntBASIC0.6□□□□□ -2.31
VCPP55072 SNORD105-201ENST00000386910 85 ntBASIC0.6□□□□□ -2.31
VCPP55072 RNU6-913P-201ENST00000390913 95 ntBASIC0.6□□□□□ -2.31
VCPP55072 Y_RNA.622-201ENST00000411091 108 ntBASIC0.6□□□□□ -2.31
VCPP55072 AC244023.1-201ENST00000426884 112 ntBASIC0.6□□□□□ -2.31
VCPP55072 AF228730.3-201ENST00000436691 102 ntBASIC0.6□□□□□ -2.31
VCPP55072 snoU13.21-201ENST00000459368 105 ntBASIC0.6□□□□□ -2.31
VCPP55072 RPS29P24-201ENST00000486345 171 ntBASIC0.6□□□□□ -2.31
VCPP55072 RNA5SP153-201ENST00000516498 76 ntBASIC0.6□□□□□ -2.31
VCPP55072 RNU7-53P-201ENST00000516705 60 ntBASIC0.6□□□□□ -2.31
VCPP55072 RNU6-453P-201ENST00000516819 85 ntBASIC0.6□□□□□ -2.31
VCPP55072 MIR4282-201ENST00000583613 67 ntBASIC0.6□□□□□ -2.31
VCPP55072 AC242498.1-201ENST00000604134 111 ntBASIC0.6□□□□□ -2.31
VCPP55072 MIR8055-201ENST00000610739 97 ntBASIC0.6□□□□□ -2.31
VCPP55072 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.6□□□□□ -2.31
VCPP55072 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
VCPP55072 SNORA63-201ENST00000363450 132 ntBASIC0.59□□□□□ -2.31
VCPP55072 Y_RNA.304-201ENST00000365011 112 ntBASIC0.59□□□□□ -2.31
VCPP55072 RNU6-934P-201ENST00000365154 107 ntBASIC0.59□□□□□ -2.31
VCPP55072 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
VCPP55072 MIR606-201ENST00000384851 96 ntBASIC0.59□□□□□ -2.31
VCPP55072 MIR329-2-201ENST00000385029 84 ntBASIC0.59□□□□□ -2.31
VCPP55072 MIR616-201ENST00000385293 97 ntBASIC0.59□□□□□ -2.31
VCPP55072 AL606845.1-201ENST00000404881 255 ntBASIC0.59□□□□□ -2.31
VCPP55072 MIR548F4-201ENST00000408515 105 ntBASIC0.59□□□□□ -2.31
VCPP55072 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
VCPP55072 AL442663.2-201ENST00000554385 511 ntBASIC0.59□□□□□ -2.31
VCPP55072 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.59□□□□□ -2.31
VCPP55072 Y_RNA.812-201ENST00000610788 101 ntBASIC0.59□□□□□ -2.31
VCPP55072 AC243829.6-201ENST00000612652 106 ntBASIC0.59□□□□□ -2.31
VCPP55072 Y_RNA.784-201ENST00000613803 101 ntBASIC0.59□□□□□ -2.31
VCPP55072 Y_RNA.787-201ENST00000616522 101 ntBASIC0.59□□□□□ -2.31
VCPP55072 Y_RNA.780-201ENST00000617336 101 ntBASIC0.59□□□□□ -2.31
VCPP55072 Y_RNA.801-201ENST00000619005 101 ntBASIC0.59□□□□□ -2.31
VCPP55072 uc_338.17-201ENST00000619633 179 ntBASIC0.59□□□□□ -2.31
VCPP55072 AL365265.1-201ENST00000621045 234 ntBASIC0.59□□□□□ -2.31
VCPP55072 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
VCPP55072 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
VCPP55072 RNU6-369P-201ENST00000362515 102 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms