Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC107027.2-201ENST00000512197 115 ntBASIC1.23□□□□□ -2.21
NR1H2P55055 Y_RNA.662-201ENST00000516028 97 ntBASIC1.23□□□□□ -2.21
NR1H2P55055 AL365205.2-201ENST00000594586 68 ntBASIC1.23□□□□□ -2.21
NR1H2P55055 MTND1P7-201ENST00000632801 297 ntBASIC1.23□□□□□ -2.21
NR1H2P55055 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
NR1H2P55055 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.22□□□□□ -2.21
NR1H2P55055 RNA5SP264-201ENST00000363115 107 ntBASIC1.22□□□□□ -2.21
NR1H2P55055 RPS29P29-201ENST00000456396 171 ntBASIC1.22□□□□□ -2.21
NR1H2P55055 RNU7-90P-201ENST00000459216 62 ntBASIC1.22□□□□□ -2.21
NR1H2P55055 RNU11-2P-201ENST00000516898 142 ntBASIC1.22□□□□□ -2.21
NR1H2P55055 RNU6-958P-201ENST00000516995 106 ntBASIC1.22□□□□□ -2.21
NR1H2P55055 MIR6078-201ENST00000611069 100 ntBASIC1.22□□□□□ -2.21
NR1H2P55055 AC012676.2-201ENST00000619258 186 ntBASIC1.22□□□□□ -2.21
NR1H2P55055 MIR376A2-201ENST00000636782 80 ntBASIC1.22□□□□□ -2.21
NR1H2P55055 MIR103A2-201ENST00000362154 78 ntBASIC1.21□□□□□ -2.22
NR1H2P55055 SNORA25.7-201ENST00000364375 127 ntBASIC1.21□□□□□ -2.22
NR1H2P55055 Y_RNA.363-201ENST00000365529 113 ntBASIC1.21□□□□□ -2.22
NR1H2P55055 RNU6-1292P-201ENST00000383856 107 ntBASIC1.21□□□□□ -2.22
NR1H2P55055 Y_RNA.440-201ENST00000384120 114 ntBASIC1.21□□□□□ -2.22
NR1H2P55055 MIR200A-201ENST00000384875 90 ntBASIC1.21□□□□□ -2.22
NR1H2P55055 RPS29P24-201ENST00000486345 171 ntBASIC1.21□□□□□ -2.22
NR1H2P55055 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.21□□□□□ -2.22
NR1H2P55055 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
NR1H2P55055 SNORD114-27-201ENST00000363766 70 ntBASIC1.2□□□□□ -2.22
NR1H2P55055 Y_RNA.337-201ENST00000365312 102 ntBASIC1.2□□□□□ -2.22
NR1H2P55055 RNU6-1336P-201ENST00000383886 109 ntBASIC1.2□□□□□ -2.22
NR1H2P55055 SNORA24-201ENST00000384096 131 ntBASIC1.2□□□□□ -2.22
NR1H2P55055 RNU6-42P-201ENST00000384165 107 ntBASIC1.2□□□□□ -2.22
NR1H2P55055 RNU6-768P-201ENST00000384683 107 ntBASIC1.2□□□□□ -2.22
NR1H2P55055 RNU5E-9P-201ENST00000411164 104 ntBASIC1.2□□□□□ -2.22
NR1H2P55055 AC074198.2-201ENST00000508153 258 ntBASIC1.2□□□□□ -2.22
NR1H2P55055 AP003716.2-201ENST00000528260 108 ntBASIC1.2□□□□□ -2.22
NR1H2P55055 MIR548AO-201ENST00000579992 96 ntBASIC1.2□□□□□ -2.22
NR1H2P55055 MIR5197-201ENST00000583721 112 ntBASIC1.2□□□□□ -2.22
NR1H2P55055 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
NR1H2P55055 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
NR1H2P55055 MIR342-201ENST00000362212 99 ntBASIC1.19□□□□□ -2.22
NR1H2P55055 RNU4-84P-201ENST00000364200 139 ntBASIC1.19□□□□□ -2.22
NR1H2P55055 RNU6-597P-201ENST00000365620 102 ntBASIC1.19□□□□□ -2.22
NR1H2P55055 Y_RNA.393-201ENST00000383936 102 ntBASIC1.19□□□□□ -2.22
NR1H2P55055 RNU6-239P-201ENST00000390990 99 ntBASIC1.19□□□□□ -2.22
NR1H2P55055 MIR1185-1-201ENST00000408598 86 ntBASIC1.19□□□□□ -2.22
NR1H2P55055 RNA5SP127-201ENST00000411051 133 ntBASIC1.19□□□□□ -2.22
NR1H2P55055 MRPL35P3-201ENST00000421557 364 ntBASIC1.19□□□□□ -2.22
NR1H2P55055 AC002429.1-201ENST00000437672 148 ntBASIC1.19□□□□□ -2.22
NR1H2P55055 RNU7-21P-201ENST00000459430 62 ntBASIC1.19□□□□□ -2.22
NR1H2P55055 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.19□□□□□ -2.22
NR1H2P55055 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
NR1H2P55055 MIR96-201ENST00000362288 78 ntBASIC1.18□□□□□ -2.22
NR1H2P55055 SNORD114-24-201ENST00000365029 72 ntBASIC1.18□□□□□ -2.22
NR1H2P55055 Y_RNA.351-201ENST00000365436 96 ntBASIC1.18□□□□□ -2.22
NR1H2P55055 MIR1302-7-201ENST00000408841 72 ntBASIC1.18□□□□□ -2.22
NR1H2P55055 AL035398.1-201ENST00000430869 322 ntBASIC1.18□□□□□ -2.22
NR1H2P55055 snoU13.16-201ENST00000459350 104 ntBASIC1.18□□□□□ -2.22
NR1H2P55055 RNU7-96P-201ENST00000459535 64 ntBASIC1.18□□□□□ -2.22
NR1H2P55055 RNA5SP220-201ENST00000516298 104 ntBASIC1.18□□□□□ -2.22
NR1H2P55055 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.18□□□□□ -2.22
NR1H2P55055 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.18□□□□□ -2.22
NR1H2P55055 HSPE1P19-201ENST00000603327 295 ntBASIC1.18□□□□□ -2.22
NR1H2P55055 RMST_2.1-201ENST00000617263 136 ntBASIC1.18□□□□□ -2.22
NR1H2P55055 AL391516.1-201ENST00000554380 2449 ntBASIC1.17□□□□□ -2.22
NR1H2P55055 Y_RNA.270-201ENST00000364693 104 ntBASIC1.17□□□□□ -2.22
NR1H2P55055 MIR624-201ENST00000385217 97 ntBASIC1.17□□□□□ -2.22
NR1H2P55055 SNORA75.2-201ENST00000391138 150 ntBASIC1.17□□□□□ -2.22
NR1H2P55055 SNORA75.3-201ENST00000391231 150 ntBASIC1.17□□□□□ -2.22
NR1H2P55055 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
NR1H2P55055 RNU2-64P-201ENST00000411315 191 ntBASIC1.17□□□□□ -2.22
NR1H2P55055 AL392103.1-201ENST00000447000 198 ntBASIC1.17□□□□□ -2.22
NR1H2P55055 RNU2-11P-201ENST00000459191 187 ntBASIC1.17□□□□□ -2.22
NR1H2P55055 RNU6-998P-201ENST00000515894 101 ntBASIC1.17□□□□□ -2.22
NR1H2P55055 RNU7-53P-201ENST00000516705 60 ntBASIC1.17□□□□□ -2.22
NR1H2P55055 FTX_2.1-201ENST00000618816 94 ntBASIC1.17□□□□□ -2.22
NR1H2P55055 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
NR1H2P55055 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
NR1H2P55055 Y_RNA.150-201ENST00000363562 102 ntBASIC1.16□□□□□ -2.22
NR1H2P55055 RNU6-1082P-201ENST00000364574 107 ntBASIC1.16□□□□□ -2.22
NR1H2P55055 Y_RNA.330-201ENST00000365230 109 ntBASIC1.16□□□□□ -2.22
NR1H2P55055 Y_RNA.441-201ENST00000384123 112 ntBASIC1.16□□□□□ -2.22
NR1H2P55055 RNU6-913P-201ENST00000390913 95 ntBASIC1.16□□□□□ -2.22
NR1H2P55055 SEPT14P17-201ENST00000617978 177 ntBASIC1.16□□□□□ -2.22
NR1H2P55055 MIR6844-201ENST00000637122 62 ntBASIC1.16□□□□□ -2.22
NR1H2P55055 AC008163.1-202ENST00000636004 2889 ntBASIC1.16□□□□□ -2.22
NR1H2P55055 Y_RNA.272-201ENST00000364696 102 ntBASIC1.15□□□□□ -2.23
NR1H2P55055 MIR7-2-201ENST00000384970 110 ntBASIC1.15□□□□□ -2.23
NR1H2P55055 RNU7-73P-201ENST00000458743 63 ntBASIC1.15□□□□□ -2.23
NR1H2P55055 RNU7-80P-201ENST00000459562 61 ntBASIC1.15□□□□□ -2.23
NR1H2P55055 UBL5P1-201ENST00000507979 193 ntBASIC1.15□□□□□ -2.23
NR1H2P55055 RNU7-121P-201ENST00000516604 62 ntBASIC1.15□□□□□ -2.23
NR1H2P55055 MIR3668-201ENST00000582138 75 ntBASIC1.15□□□□□ -2.23
NR1H2P55055 MIR4661-201ENST00000582720 75 ntBASIC1.15□□□□□ -2.23
NR1H2P55055 MIR302B-201ENST00000362188 73 ntBASIC1.14□□□□□ -2.23
NR1H2P55055 RNU6-396P-201ENST00000365369 105 ntBASIC1.14□□□□□ -2.23
NR1H2P55055 SNORA40.6-201ENST00000391153 128 ntBASIC1.14□□□□□ -2.23
NR1H2P55055 RNU6-1135P-201ENST00000411083 103 ntBASIC1.14□□□□□ -2.23
NR1H2P55055 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
NR1H2P55055 RNU6-1149P-201ENST00000516810 97 ntBASIC1.14□□□□□ -2.23
NR1H2P55055 MIR3660-201ENST00000584845 100 ntBASIC1.14□□□□□ -2.23
NR1H2P55055 AC104465.1-201ENST00000611365 139 ntBASIC1.14□□□□□ -2.23
NR1H2P55055 MIR6516-201ENST00000630554 81 ntBASIC1.14□□□□□ -2.23
NR1H2P55055 MIR3658-201ENST00000636291 56 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms