Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RNU6-1149P-201ENST00000516810 97 ntBASIC1.5□□□□□ -2.17
COPAP53621 MIR4421-201ENST00000578133 69 ntBASIC1.5□□□□□ -2.17
COPAP53621 MIR4791-201ENST00000607666 84 ntBASIC1.5□□□□□ -2.17
COPAP53621 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.5□□□□□ -2.17
COPAP53621 MIR8070-201ENST00000616510 88 ntBASIC1.5□□□□□ -2.17
COPAP53621 MIR8065-201ENST00000620577 100 ntBASIC1.5□□□□□ -2.17
COPAP53621 MIR376A2-201ENST00000636782 80 ntBASIC1.5□□□□□ -2.17
COPAP53621 ZNF209P-201ENST00000593450 2304 ntBASIC1.5□□□□□ -2.17
COPAP53621 RNA5SP48-201ENST00000363969 126 ntBASIC1.49□□□□□ -2.17
COPAP53621 Y_RNA.343-201ENST00000365354 112 ntBASIC1.49□□□□□ -2.17
COPAP53621 Y_RNA.494-201ENST00000384432 111 ntBASIC1.49□□□□□ -2.17
COPAP53621 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.49□□□□□ -2.17
COPAP53621 AL354695.1-201ENST00000427935 228 ntBASIC1.49□□□□□ -2.17
COPAP53621 MTATP6P21-201ENST00000440681 189 ntBASIC1.49□□□□□ -2.17
COPAP53621 RPS29P29-201ENST00000456396 171 ntBASIC1.49□□□□□ -2.17
COPAP53621 RNU7-41P-201ENST00000515917 61 ntBASIC1.49□□□□□ -2.17
COPAP53621 Y_RNA.703-201ENST00000516846 111 ntBASIC1.49□□□□□ -2.17
COPAP53621 MTND5P32-201ENST00000560711 1802 ntBASIC1.48□□□□□ -2.17
COPAP53621 MIR302B-201ENST00000362188 73 ntBASIC1.48□□□□□ -2.17
COPAP53621 SNORA7.1-201ENST00000363750 139 ntBASIC1.48□□□□□ -2.17
COPAP53621 SNORA25.8-201ENST00000364831 128 ntBASIC1.48□□□□□ -2.17
COPAP53621 Y_RNA.327-201ENST00000365201 102 ntBASIC1.48□□□□□ -2.17
COPAP53621 RNU6-746P-201ENST00000384112 109 ntBASIC1.48□□□□□ -2.17
COPAP53621 MIR1287-201ENST00000408492 90 ntBASIC1.48□□□□□ -2.17
COPAP53621 AL035398.1-201ENST00000430869 322 ntBASIC1.48□□□□□ -2.17
COPAP53621 RNU2-13P-201ENST00000515909 113 ntBASIC1.48□□□□□ -2.17
COPAP53621 RNU7-53P-201ENST00000516705 60 ntBASIC1.48□□□□□ -2.17
COPAP53621 RNU6-958P-201ENST00000516995 106 ntBASIC1.48□□□□□ -2.17
COPAP53621 MIR3192-201ENST00000584920 77 ntBASIC1.48□□□□□ -2.17
COPAP53621 MIR4251-201ENST00000635819 61 ntBASIC1.48□□□□□ -2.17
COPAP53621 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
COPAP53621 RNU6-774P-201ENST00000363238 107 ntBASIC1.47□□□□□ -2.17
COPAP53621 RNU6-939P-201ENST00000384634 107 ntBASIC1.47□□□□□ -2.17
COPAP53621 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
COPAP53621 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.47□□□□□ -2.17
COPAP53621 RNU6-998P-201ENST00000515894 101 ntBASIC1.47□□□□□ -2.17
COPAP53621 RNU6-346P-201ENST00000516288 111 ntBASIC1.47□□□□□ -2.17
COPAP53621 RNU1-92P-201ENST00000517017 135 ntBASIC1.47□□□□□ -2.17
COPAP53621 MIR3133-201ENST00000583157 78 ntBASIC1.47□□□□□ -2.17
COPAP53621 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.47□□□□□ -2.17
COPAP53621 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
COPAP53621 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.47□□□□□ -2.17
COPAP53621 Y_RNA.251-201ENST00000364551 99 ntBASIC1.46□□□□□ -2.18
COPAP53621 RNU1-133P-201ENST00000364867 167 ntBASIC1.46□□□□□ -2.18
COPAP53621 RNU6-392P-201ENST00000364926 101 ntBASIC1.46□□□□□ -2.18
COPAP53621 SNORA24-201ENST00000384096 131 ntBASIC1.46□□□□□ -2.18
COPAP53621 RNU6-125P-201ENST00000384505 107 ntBASIC1.46□□□□□ -2.18
COPAP53621 MIR569-201ENST00000385228 96 ntBASIC1.46□□□□□ -2.18
COPAP53621 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.46□□□□□ -2.18
COPAP53621 SCARNA15-202ENST00000516881 127 ntBASIC1.46□□□□□ -2.18
COPAP53621 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
COPAP53621 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
COPAP53621 AL596211.1-201ENST00000569873 2277 ntBASIC1.45□□□□□ -2.18
COPAP53621 Y_RNA.120-201ENST00000363304 110 ntBASIC1.45□□□□□ -2.18
COPAP53621 RNU6-460P-201ENST00000391158 108 ntBASIC1.45□□□□□ -2.18
COPAP53621 RNU7-197P-201ENST00000458836 62 ntBASIC1.45□□□□□ -2.18
COPAP53621 RNU2-11P-201ENST00000459191 187 ntBASIC1.45□□□□□ -2.18
COPAP53621 snoU13.16-201ENST00000459350 104 ntBASIC1.45□□□□□ -2.18
COPAP53621 AC048334.1-201ENST00000477975 159 ntBASIC1.45□□□□□ -2.18
COPAP53621 AL133373.1-201ENST00000497098 94 ntBASIC1.45□□□□□ -2.18
COPAP53621 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
COPAP53621 RNU7-73P-201ENST00000458743 63 ntBASIC1.44□□□□□ -2.18
COPAP53621 SNORA31.2-201ENST00000516019 134 ntBASIC1.44□□□□□ -2.18
COPAP53621 RNU6-426P-201ENST00000516464 97 ntBASIC1.44□□□□□ -2.18
COPAP53621 AC019288.1-201ENST00000557918 224 ntBASIC1.44□□□□□ -2.18
COPAP53621 AC091932.4-201ENST00000623386 200 ntBASIC1.44□□□□□ -2.18
COPAP53621 U8.1-201ENST00000362843 134 ntBASIC1.43□□□□□ -2.18
COPAP53621 RNY1P11-201ENST00000363759 113 ntBASIC1.43□□□□□ -2.18
COPAP53621 Y_RNA.420-201ENST00000384043 110 ntBASIC1.43□□□□□ -2.18
COPAP53621 MIR499A-201ENST00000384903 122 ntBASIC1.43□□□□□ -2.18
COPAP53621 MIR618-201ENST00000385287 98 ntBASIC1.43□□□□□ -2.18
COPAP53621 AL603908.1-201ENST00000406098 201 ntBASIC1.43□□□□□ -2.18
COPAP53621 SUMO1P3-201ENST00000439961 304 ntBASIC1.43□□□□□ -2.18
COPAP53621 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
COPAP53621 AP001328.1-201ENST00000528550 176 ntBASIC1.43□□□□□ -2.18
COPAP53621 SNORA25.3-201ENST00000363205 127 ntBASIC1.42□□□□□ -2.18
COPAP53621 RNU6-915P-201ENST00000364943 103 ntBASIC1.42□□□□□ -2.18
COPAP53621 RNU6-1054P-201ENST00000411293 104 ntBASIC1.42□□□□□ -2.18
COPAP53621 AC245047.7-201ENST00000440265 293 ntBASIC1.42□□□□□ -2.18
COPAP53621 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.42□□□□□ -2.18
COPAP53621 SNORA31.4-201ENST00000516049 129 ntBASIC1.42□□□□□ -2.18
COPAP53621 Y_RNA.690-201ENST00000516603 95 ntBASIC1.42□□□□□ -2.18
COPAP53621 AL157834.3-201ENST00000615543 103 ntBASIC1.42□□□□□ -2.18
COPAP53621 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
COPAP53621 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
COPAP53621 AC010332.2-201ENST00000613083 1904 ntBASIC1.41□□□□□ -2.18
COPAP53621 SNORA25.9-201ENST00000365087 128 ntBASIC1.41□□□□□ -2.18
COPAP53621 SNORA20-201ENST00000384662 132 ntBASIC1.41□□□□□ -2.18
COPAP53621 AL603914.1-201ENST00000401964 204 ntBASIC1.41□□□□□ -2.18
COPAP53621 RNA5SP261-201ENST00000410536 106 ntBASIC1.41□□□□□ -2.18
COPAP53621 snoU13.25-201ENST00000458945 104 ntBASIC1.41□□□□□ -2.18
COPAP53621 RNA5SP236-201ENST00000516169 116 ntBASIC1.41□□□□□ -2.18
COPAP53621 Y_RNA.686-201ENST00000516548 134 ntBASIC1.41□□□□□ -2.18
COPAP53621 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.41□□□□□ -2.18
COPAP53621 AL353770.2-201ENST00000620024 78 ntBASIC1.41□□□□□ -2.18
COPAP53621 AP001340.1-201ENST00000624405 217 ntBASIC1.41□□□□□ -2.18
COPAP53621 MIR103A2-201ENST00000362154 78 ntBASIC1.4□□□□□ -2.19
COPAP53621 Y_RNA.568-201ENST00000384742 113 ntBASIC1.4□□□□□ -2.19
COPAP53621 MIR613-201ENST00000385248 95 ntBASIC1.4□□□□□ -2.19
COPAP53621 RNU5E-3P-201ENST00000515913 68 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms