Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
NUP98P52948 SNORD41.1-201ENST00000391000 69 ntBASIC-0.98□□□□□ -2.57
NUP98P52948 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.98□□□□□ -2.57
NUP98P52948 SNORA25.16-201ENST00000516741 121 ntBASIC-0.98□□□□□ -2.57
NUP98P52948 AC022960.3-201ENST00000619794 441 ntBASIC-0.98□□□□□ -2.57
NUP98P52948 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.99□□□□□ -2.57
NUP98P52948 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.99□□□□□ -2.57
NUP98P52948 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.99□□□□□ -2.57
NUP98P52948 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.99□□□□□ -2.57
NUP98P52948 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.99□□□□□ -2.57
NUP98P52948 AC006210.1-201ENST00000424882 111 ntBASIC-0.99□□□□□ -2.57
NUP98P52948 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.99□□□□□ -2.57
NUP98P52948 AC055872.1-201ENST00000570978 278 ntBASIC-0.99□□□□□ -2.57
NUP98P52948 NBR2-204ENST00000587322 63 ntBASIC-0.99□□□□□ -2.57
NUP98P52948 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.99□□□□□ -2.57
NUP98P52948 Y_RNA.28-201ENST00000362554 111 ntBASIC-1□□□□□ -2.57
NUP98P52948 Y_RNA.615-201ENST00000410769 117 ntBASIC-1□□□□□ -2.57
NUP98P52948 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1□□□□□ -2.57
NUP98P52948 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1□□□□□ -2.57
NUP98P52948 RNU6-653P-201ENST00000363074 106 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 RNU6-99P-201ENST00000364721 107 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 RNU4-70P-201ENST00000384579 139 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 RNU7-141P-201ENST00000459304 62 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 RNU6-835P-201ENST00000516974 104 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 RNA5SP169-201ENST00000517268 117 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 DEFB131E-201ENST00000532329 154 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 MIR6717-201ENST00000622747 73 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 MIR3662-201ENST00000637030 95 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 RNU6-144P-201ENST00000383951 107 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 MIR4499-201ENST00000584834 69 ntBASIC-1.01□□□□□ -2.57
NUP98P52948 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.02□□□□□ -2.57
NUP98P52948 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.02□□□□□ -2.57
NUP98P52948 MIR548A2-201ENST00000384956 97 ntBASIC-1.02□□□□□ -2.57
NUP98P52948 AC074085.1-201ENST00000413598 418 ntBASIC-1.02□□□□□ -2.57
NUP98P52948 AC244505.6-201ENST00000452829 130 ntBASIC-1.02□□□□□ -2.57
NUP98P52948 RNU7-96P-201ENST00000459535 64 ntBASIC-1.02□□□□□ -2.57
NUP98P52948 AL603755.1-201ENST00000619504 163 ntBASIC-1.02□□□□□ -2.57
NUP98P52948 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 RNU6-47P-201ENST00000383866 107 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 RNU6-938P-201ENST00000411285 103 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 AC108059.2-201ENST00000434626 151 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 AC098826.2-201ENST00000452011 651 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 RNU6-126P-201ENST00000516685 103 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 AL512360.1-201ENST00000555346 234 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 MIR3942-201ENST00000585264 109 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 RNY3P3-201ENST00000363816 102 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 U8.6-201ENST00000364939 135 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 RNU6-373P-201ENST00000411247 98 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 SNORA13-201ENST00000458790 133 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 RNU6-864P-201ENST00000516256 108 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 RNU6-911P-201ENST00000516523 104 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 RNU6-531P-201ENST00000516694 104 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 AC141846.1-201ENST00000568348 142 ntBASIC-1.03□□□□□ -2.57
NUP98P52948 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.03□□□□□ -2.57
NUP98P52948 SNORA63.5-201ENST00000363548 123 ntBASIC-1.04□□□□□ -2.58
NUP98P52948 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.04□□□□□ -2.58
NUP98P52948 MTND3P3-201ENST00000505004 126 ntBASIC-1.04□□□□□ -2.58
NUP98P52948 RNU6-273P-201ENST00000516937 96 ntBASIC-1.04□□□□□ -2.58
NUP98P52948 RNU6-365P-201ENST00000517113 106 ntBASIC-1.04□□□□□ -2.58
NUP98P52948 AC119751.7-201ENST00000600494 245 ntBASIC-1.04□□□□□ -2.58
NUP98P52948 MIR1244-1-201ENST00000612829 85 ntBASIC-1.04□□□□□ -2.58
NUP98P52948 MIR1244-3-201ENST00000635744 85 ntBASIC-1.04□□□□□ -2.58
NUP98P52948 MIR1244-2-201ENST00000636449 85 ntBASIC-1.04□□□□□ -2.58
NUP98P52948 MIR1244-4-202ENST00000636813 85 ntBASIC-1.04□□□□□ -2.58
NUP98P52948 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 RNU6-490P-201ENST00000362985 107 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 RNY1P13-201ENST00000365030 105 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 RNU6-274P-201ENST00000459566 107 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 MTND3P12-201ENST00000559068 328 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 RNU6-597P-201ENST00000365620 102 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
NUP98P52948 RNU6-721P-201ENST00000410155 105 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.05□□□□□ -2.58
NUP98P52948 AC021146.9-201ENST00000512503 156 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 RNU6-158P-201ENST00000517104 100 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.05□□□□□ -2.58
NUP98P52948 RNU6-865P-201ENST00000364772 107 ntBASIC-1.06□□□□□ -2.58
NUP98P52948 SNORD115-44-201ENST00000365391 82 ntBASIC-1.06□□□□□ -2.58
NUP98P52948 RNU6-483P-201ENST00000384088 108 ntBASIC-1.06□□□□□ -2.58
NUP98P52948 MIR181B2-201ENST00000385004 89 ntBASIC-1.06□□□□□ -2.58
NUP98P52948 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.06□□□□□ -2.58
NUP98P52948 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.06□□□□□ -2.58
NUP98P52948 AC010655.3-201ENST00000478818 450 ntBASIC-1.06□□□□□ -2.58
NUP98P52948 RNU4-50P-201ENST00000364361 141 ntBASIC-1.07□□□□□ -2.58
NUP98P52948 RNU6-593P-201ENST00000364716 112 ntBASIC-1.07□□□□□ -2.58
NUP98P52948 SNORD78.2-201ENST00000391076 69 ntBASIC-1.07□□□□□ -2.58
NUP98P52948 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.07□□□□□ -2.58
NUP98P52948 MTND1P2-201ENST00000430604 821 ntBASIC-1.07□□□□□ -2.58
NUP98P52948 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.07□□□□□ -2.58
NUP98P52948 SNORA25.13-201ENST00000516395 103 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms