Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 SNORD115-1-201ENST00000364961 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-26-201ENST00000365067 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-10-201ENST00000365073 81 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORA1.2-201ENST00000365189 134 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-43-201ENST00000365503 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-36-201ENST00000365629 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 Y_RNA.537-201ENST00000384626 109 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 Y_RNA.542-201ENST00000384641 111 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 MIR520C-201ENST00000385005 87 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.01□□□□□ -2.25
CLCN4P51793 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.01□□□□□ -2.25
CLCN4P51793 AL121914.1-201ENST00000450188 156 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 RNU7-41P-201ENST00000515917 61 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 RNU7-181P-201ENST00000517234 74 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 CYP3A137P-201ENST00000562436 69 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 MIR4431-201ENST00000579990 94 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 SNORD115-40-201ENST00000606510 82 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 AC134878.1-201ENST00000619901 243 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 AC008133.2-201ENST00000624540 351 ntBASIC1.01□□□□□ -2.25
CLCN4P51793 RNU6-682P-201ENST00000363843 106 ntBASIC1□□□□□ -2.25
CLCN4P51793 RNU1-124P-201ENST00000363861 145 ntBASIC1□□□□□ -2.25
CLCN4P51793 RNA5SP48-201ENST00000363969 126 ntBASIC1□□□□□ -2.25
CLCN4P51793 RNU6-1318P-201ENST00000365389 103 ntBASIC1□□□□□ -2.25
CLCN4P51793 RNU6-1292P-201ENST00000383856 107 ntBASIC1□□□□□ -2.25
CLCN4P51793 Y_RNA.410-201ENST00000383992 113 ntBASIC1□□□□□ -2.25
CLCN4P51793 SNORA80D-201ENST00000384488 135 ntBASIC1□□□□□ -2.25
CLCN4P51793 SNORA79-201ENST00000408376 140 ntBASIC1□□□□□ -2.25
CLCN4P51793 Y_RNA.793-201ENST00000411222 111 ntBASIC1□□□□□ -2.25
CLCN4P51793 RNU2-64P-201ENST00000411315 191 ntBASIC1□□□□□ -2.25
CLCN4P51793 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1□□□□□ -2.25
CLCN4P51793 RNU6-1270P-201ENST00000517128 108 ntBASIC1□□□□□ -2.25
CLCN4P51793 SNORA81.3-201ENST00000517283 198 ntBASIC1□□□□□ -2.25
CLCN4P51793 AC022559.1-201ENST00000520905 205 ntBASIC1□□□□□ -2.25
CLCN4P51793 AP002392.1-201ENST00000537692 208 ntBASIC1□□□□□ -2.25
CLCN4P51793 MIR378D2-201ENST00000580636 98 ntBASIC1□□□□□ -2.25
CLCN4P51793 PRELID3BP2-201ENST00000605362 201 ntBASIC1□□□□□ -2.25
CLCN4P51793 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
CLCN4P51793 Y_RNA.370-201ENST00000365589 108 ntBASIC0.99□□□□□ -2.25
CLCN4P51793 RNU6-597P-201ENST00000365620 102 ntBASIC0.99□□□□□ -2.25
CLCN4P51793 SNORA1-201ENST00000384107 130 ntBASIC0.99□□□□□ -2.25
CLCN4P51793 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
CLCN4P51793 SNORA40.5-201ENST00000391061 128 ntBASIC0.99□□□□□ -2.25
CLCN4P51793 AF228730.3-201ENST00000436691 102 ntBASIC0.99□□□□□ -2.25
CLCN4P51793 SNORD79.1-201ENST00000516069 84 ntBASIC0.99□□□□□ -2.25
CLCN4P51793 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
CLCN4P51793 MIR6779-201ENST00000617283 64 ntBASIC0.99□□□□□ -2.25
CLCN4P51793 Y_RNA.441-201ENST00000384123 112 ntBASIC0.98□□□□□ -2.25
CLCN4P51793 Y_RNA.494-201ENST00000384432 111 ntBASIC0.98□□□□□ -2.25
CLCN4P51793 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
CLCN4P51793 SNORD12-201ENST00000391002 90 ntBASIC0.98□□□□□ -2.25
CLCN4P51793 SNORD77.3-201ENST00000391113 65 ntBASIC0.98□□□□□ -2.25
CLCN4P51793 MIR1302-7-201ENST00000408841 72 ntBASIC0.98□□□□□ -2.25
CLCN4P51793 RNU5E-9P-201ENST00000411164 104 ntBASIC0.98□□□□□ -2.25
CLCN4P51793 AC063976.4-201ENST00000421971 163 ntBASIC0.98□□□□□ -2.25
CLCN4P51793 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.98□□□□□ -2.25
CLCN4P51793 AC108059.2-201ENST00000434626 151 ntBASIC0.98□□□□□ -2.25
CLCN4P51793 RPS26P48-201ENST00000491713 339 ntBASIC0.98□□□□□ -2.25
CLCN4P51793 SNORA18.4-201ENST00000516440 124 ntBASIC0.98□□□□□ -2.25
CLCN4P51793 AP003484.1-201ENST00000530974 250 ntBASIC0.98□□□□□ -2.25
CLCN4P51793 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.98□□□□□ -2.25
CLCN4P51793 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.98□□□□□ -2.25
CLCN4P51793 AC004792.1-201ENST00000614523 137 ntBASIC0.98□□□□□ -2.25
CLCN4P51793 MIR376A2-201ENST00000636782 80 ntBASIC0.98□□□□□ -2.25
CLCN4P51793 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.98□□□□□ -2.25
CLCN4P51793 Y_RNA.363-201ENST00000365529 113 ntBASIC0.97□□□□□ -2.25
CLCN4P51793 Y_RNA.440-201ENST00000384120 114 ntBASIC0.97□□□□□ -2.25
CLCN4P51793 AC002429.1-201ENST00000437672 148 ntBASIC0.97□□□□□ -2.25
CLCN4P51793 AL392103.1-201ENST00000447000 198 ntBASIC0.97□□□□□ -2.25
CLCN4P51793 SNORD116-25-201ENST00000516517 92 ntBASIC0.97□□□□□ -2.25
CLCN4P51793 SNORD36C-201ENST00000516733 66 ntBASIC0.97□□□□□ -2.25
CLCN4P51793 MIR5197-201ENST00000583721 112 ntBASIC0.97□□□□□ -2.25
CLCN4P51793 MIR4791-201ENST00000607666 84 ntBASIC0.97□□□□□ -2.25
CLCN4P51793 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.96□□□□□ -2.26
CLCN4P51793 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CLCN4P51793 Y_RNA.36-201ENST00000362602 112 ntBASIC0.96□□□□□ -2.26
CLCN4P51793 RNU6-1189P-201ENST00000383958 107 ntBASIC0.96□□□□□ -2.26
CLCN4P51793 MIR624-201ENST00000385217 97 ntBASIC0.96□□□□□ -2.26
CLCN4P51793 MIR1185-1-201ENST00000408598 86 ntBASIC0.96□□□□□ -2.26
CLCN4P51793 POLR2J4-204ENST00000418424 324 ntBASIC0.96□□□□□ -2.26
CLCN4P51793 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.96□□□□□ -2.26
CLCN4P51793 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
CLCN4P51793 RNU7-121P-201ENST00000516604 62 ntBASIC0.96□□□□□ -2.26
CLCN4P51793 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.96□□□□□ -2.26
CLCN4P51793 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
CLCN4P51793 FTX_2.1-201ENST00000618816 94 ntBASIC0.96□□□□□ -2.26
CLCN4P51793 MIR4251-201ENST00000635819 61 ntBASIC0.96□□□□□ -2.26
CLCN4P51793 AC008163.1-202ENST00000636004 2889 ntBASIC0.96□□□□□ -2.26
CLCN4P51793 RNA5SP264-201ENST00000363115 107 ntBASIC0.95□□□□□ -2.26
CLCN4P51793 RNU4-84P-201ENST00000364200 139 ntBASIC0.95□□□□□ -2.26
CLCN4P51793 Y_RNA.241-201ENST00000364470 117 ntBASIC0.95□□□□□ -2.26
CLCN4P51793 RNU1-133P-201ENST00000364867 167 ntBASIC0.95□□□□□ -2.26
CLCN4P51793 SNORA27-201ENST00000384323 126 ntBASIC0.95□□□□□ -2.26
CLCN4P51793 RNU6-1067P-201ENST00000384752 107 ntBASIC0.95□□□□□ -2.26
CLCN4P51793 SEPT7P4-201ENST00000437076 306 ntBASIC0.95□□□□□ -2.26
CLCN4P51793 RNU7-73P-201ENST00000458743 63 ntBASIC0.95□□□□□ -2.26
CLCN4P51793 AC107027.2-201ENST00000512197 115 ntBASIC0.95□□□□□ -2.26
CLCN4P51793 RNU6-861P-201ENST00000516745 106 ntBASIC0.95□□□□□ -2.26
CLCN4P51793 RNU11-2P-201ENST00000516898 142 ntBASIC0.95□□□□□ -2.26
CLCN4P51793 AC090425.1-201ENST00000610007 140 ntBASIC0.95□□□□□ -2.26
CLCN4P51793 MTND1P7-201ENST00000632801 297 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms