Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RNY1P4-201ENST00000384595 115 ntBASIC1.32□□□□□ -2.2
TM4SF4P48230 AL138752.1-201ENST00000452964 351 ntBASIC1.32□□□□□ -2.2
TM4SF4P48230 RPS26P48-201ENST00000491713 339 ntBASIC1.32□□□□□ -2.2
TM4SF4P48230 RNU6-958P-201ENST00000516995 106 ntBASIC1.32□□□□□ -2.2
TM4SF4P48230 RNU6-388P-201ENST00000517012 105 ntBASIC1.32□□□□□ -2.2
TM4SF4P48230 RNU6-389P-201ENST00000517048 105 ntBASIC1.32□□□□□ -2.2
TM4SF4P48230 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
TM4SF4P48230 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
TM4SF4P48230 MIR378D2-201ENST00000580636 98 ntBASIC1.32□□□□□ -2.2
TM4SF4P48230 MTND1P7-201ENST00000632801 297 ntBASIC1.32□□□□□ -2.2
TM4SF4P48230 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
TM4SF4P48230 Y_RNA.297-201ENST00000364950 91 ntBASIC1.31□□□□□ -2.2
TM4SF4P48230 Y_RNA.435-201ENST00000384095 112 ntBASIC1.31□□□□□ -2.2
TM4SF4P48230 SNORA75.2-201ENST00000391138 150 ntBASIC1.31□□□□□ -2.2
TM4SF4P48230 SNORA75.3-201ENST00000391231 150 ntBASIC1.31□□□□□ -2.2
TM4SF4P48230 Y_RNA.793-201ENST00000411222 111 ntBASIC1.31□□□□□ -2.2
TM4SF4P48230 AF228730.3-201ENST00000436691 102 ntBASIC1.31□□□□□ -2.2
TM4SF4P48230 RNU7-21P-201ENST00000459430 62 ntBASIC1.31□□□□□ -2.2
TM4SF4P48230 RNU7-96P-201ENST00000459535 64 ntBASIC1.31□□□□□ -2.2
TM4SF4P48230 SNORA18.4-201ENST00000516440 124 ntBASIC1.31□□□□□ -2.2
TM4SF4P48230 SNORD36C-201ENST00000516733 66 ntBASIC1.31□□□□□ -2.2
TM4SF4P48230 RNU7-70P-201ENST00000516941 66 ntBASIC1.31□□□□□ -2.2
TM4SF4P48230 AC130289.1-201ENST00000577321 73 ntBASIC1.31□□□□□ -2.2
TM4SF4P48230 MIR3129-201ENST00000581095 76 ntBASIC1.31□□□□□ -2.2
TM4SF4P48230 AC078938.1-201ENST00000620993 318 ntBASIC1.31□□□□□ -2.2
TM4SF4P48230 MIR302B-201ENST00000362188 73 ntBASIC1.3□□□□□ -2.2
TM4SF4P48230 Y_RNA.23-201ENST00000362496 106 ntBASIC1.3□□□□□ -2.2
TM4SF4P48230 Y_RNA.75-201ENST00000362927 97 ntBASIC1.3□□□□□ -2.2
TM4SF4P48230 Y_RNA.521-201ENST00000384560 114 ntBASIC1.3□□□□□ -2.2
TM4SF4P48230 MIR216A-201ENST00000385063 110 ntBASIC1.3□□□□□ -2.2
TM4SF4P48230 AC006461.1-201ENST00000412637 326 ntBASIC1.3□□□□□ -2.2
TM4SF4P48230 AL035398.1-201ENST00000430869 322 ntBASIC1.3□□□□□ -2.2
TM4SF4P48230 RNU2-13P-201ENST00000515909 113 ntBASIC1.3□□□□□ -2.2
TM4SF4P48230 RNA5SP404-201ENST00000517118 132 ntBASIC1.3□□□□□ -2.2
TM4SF4P48230 AP000753.3-201ENST00000604083 169 ntBASIC1.3□□□□□ -2.2
TM4SF4P48230 RNU1-133P-201ENST00000364867 167 ntBASIC1.29□□□□□ -2.2
TM4SF4P48230 Y_RNA.363-201ENST00000365529 113 ntBASIC1.29□□□□□ -2.2
TM4SF4P48230 Y_RNA.454-201ENST00000384224 113 ntBASIC1.29□□□□□ -2.2
TM4SF4P48230 MIR1185-1-201ENST00000408598 86 ntBASIC1.29□□□□□ -2.2
TM4SF4P48230 snoU13.25-201ENST00000458945 104 ntBASIC1.29□□□□□ -2.2
TM4SF4P48230 RNU7-80P-201ENST00000459562 61 ntBASIC1.29□□□□□ -2.2
TM4SF4P48230 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.29□□□□□ -2.2
TM4SF4P48230 AC211469.2-201ENST00000605461 205 ntBASIC1.29□□□□□ -2.2
TM4SF4P48230 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.29□□□□□ -2.2
TM4SF4P48230 MIR342-201ENST00000362212 99 ntBASIC1.28□□□□□ -2.2
TM4SF4P48230 Y_RNA.30-201ENST00000362572 97 ntBASIC1.28□□□□□ -2.2
TM4SF4P48230 SNORA25.7-201ENST00000364375 127 ntBASIC1.28□□□□□ -2.2
TM4SF4P48230 SNORA24-201ENST00000384096 131 ntBASIC1.28□□□□□ -2.2
TM4SF4P48230 MIR200A-201ENST00000384875 90 ntBASIC1.28□□□□□ -2.2
TM4SF4P48230 RNU6-918P-201ENST00000391219 106 ntBASIC1.28□□□□□ -2.2
TM4SF4P48230 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.28□□□□□ -2.2
TM4SF4P48230 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.28□□□□□ -2.2
TM4SF4P48230 Y_RNA.644-201ENST00000459006 113 ntBASIC1.28□□□□□ -2.2
TM4SF4P48230 Y_RNA.674-201ENST00000516362 113 ntBASIC1.28□□□□□ -2.2
TM4SF4P48230 MRPS18CP4-201ENST00000535821 231 ntBASIC1.28□□□□□ -2.2
TM4SF4P48230 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.28□□□□□ -2.2
TM4SF4P48230 AL365205.2-201ENST00000594586 68 ntBASIC1.28□□□□□ -2.2
TM4SF4P48230 RNU1-124P-201ENST00000363861 145 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 Y_RNA.412-201ENST00000384001 104 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 MIR19B1-201ENST00000384829 87 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
TM4SF4P48230 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 RNU6-994P-201ENST00000410507 111 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 RNU6-938P-201ENST00000411285 103 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 AC002429.1-201ENST00000437672 148 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 AC067940.1-201ENST00000458411 300 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 AC107027.2-201ENST00000512197 115 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 AP003716.2-201ENST00000528260 108 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 AP002392.1-201ENST00000537692 208 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 CYP3A137P-201ENST00000562436 69 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 MIR548AO-201ENST00000579992 96 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 AC072026.1-201ENST00000605023 201 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 U6.106-201ENST00000636360 105 ntBASIC1.27□□□□□ -2.21
TM4SF4P48230 Y_RNA.233-201ENST00000364407 101 ntBASIC1.26□□□□□ -2.21
TM4SF4P48230 Y_RNA.274-201ENST00000364714 101 ntBASIC1.26□□□□□ -2.21
TM4SF4P48230 RNU6-1292P-201ENST00000383856 107 ntBASIC1.26□□□□□ -2.21
TM4SF4P48230 SNORA1-201ENST00000384107 130 ntBASIC1.26□□□□□ -2.21
TM4SF4P48230 RNA5SP261-201ENST00000410536 106 ntBASIC1.26□□□□□ -2.21
TM4SF4P48230 RNA5SP127-201ENST00000411051 133 ntBASIC1.26□□□□□ -2.21
TM4SF4P48230 RNU7-73P-201ENST00000458743 63 ntBASIC1.26□□□□□ -2.21
TM4SF4P48230 MIR4431-201ENST00000579990 94 ntBASIC1.26□□□□□ -2.21
TM4SF4P48230 RNU6-312P-201ENST00000364629 107 ntBASIC1.25□□□□□ -2.21
TM4SF4P48230 RNU6-200P-201ENST00000364743 107 ntBASIC1.25□□□□□ -2.21
TM4SF4P48230 Y_RNA.357-201ENST00000365487 109 ntBASIC1.25□□□□□ -2.21
TM4SF4P48230 Y_RNA.440-201ENST00000384120 114 ntBASIC1.25□□□□□ -2.21
TM4SF4P48230 SNORD77.3-201ENST00000391113 65 ntBASIC1.25□□□□□ -2.21
TM4SF4P48230 MIR942-201ENST00000401111 86 ntBASIC1.25□□□□□ -2.21
TM4SF4P48230 AL392103.1-201ENST00000447000 198 ntBASIC1.25□□□□□ -2.21
TM4SF4P48230 RNU6-998P-201ENST00000515894 101 ntBASIC1.25□□□□□ -2.21
TM4SF4P48230 AC023827.1-201ENST00000569247 97 ntBASIC1.25□□□□□ -2.21
TM4SF4P48230 MIR5197-201ENST00000583721 112 ntBASIC1.25□□□□□ -2.21
TM4SF4P48230 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TM4SF4P48230 Y_RNA.257-201ENST00000364596 102 ntBASIC1.24□□□□□ -2.21
TM4SF4P48230 SNORD114-24-201ENST00000365029 72 ntBASIC1.24□□□□□ -2.21
TM4SF4P48230 Y_RNA.351-201ENST00000365436 96 ntBASIC1.24□□□□□ -2.21
TM4SF4P48230 RNU6-47P-201ENST00000383866 107 ntBASIC1.24□□□□□ -2.21
TM4SF4P48230 SNORA2B-201ENST00000384583 137 ntBASIC1.24□□□□□ -2.21
TM4SF4P48230 MIR548I3-201ENST00000408378 149 ntBASIC1.24□□□□□ -2.21
TM4SF4P48230 SEPT7P4-201ENST00000437076 306 ntBASIC1.24□□□□□ -2.21
TM4SF4P48230 FABP5P4-201ENST00000437203 171 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms